BGIOSGA017522

From RiceWiki
Revision as of 16:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017522

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017522, complete gene.

LocusTag

OsI_21071

Ensembl Transcript ID

BGIOSGA017522-TA

Ensembl Protein ID

BGIOSGA017522-PA

Length

2688

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29885824..29888511

Sequence Coding Region

29888443..29888511,29887584..29887929,29886839..29886966,29885824..29886252

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29885824..29888511 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29885824..29888511 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGTGGTGCGGCCTGCGGCTGCTCCCACTGGTTTGCCTGCTTGTTATTGCTGCAGCCGCAGAAGAGGATAAAACAAATATTCTACAAGCAGACAAAAATAATGACAACAACATAGCACATTCAGATGGTGGGAAGACAGGACGGCATGATGAAACAAATCCTAATACAGTACATCATGATGAAGGAAAGAATGACCCTGATGGGAACAACAAGAAGGACAAATCAACAGAAGTTATTAGCACGGCAAAATATGCGGCAGCTGTGCATCATGTGGATAAAGATATCAACACAGCAAAATCCTCGCATGTAACAGACTTCTCACAAGATCCTCTTATCAAGGGGTGTGACCCATCTCATACATGTGTAATTGAAAATAAAAAGTTCATCGCCTGCTTGAAAGTTCCTGGAGAAGATTCATTAGCTCTATCACTTCTGATGGACAACAAAGGCATGGACCCACTTTATGTTGGTATTACAACTCCAGAATTTGTCACTTCAGCTGAAGACACCATCCATGTCCAAGCAAATGATCATAATGAGACACAGGTGACTATTTTTAACAACGGTGCACCAAACATGACAATAATTCTTAGAGTTGCTGAAGAGACCTGCAATATTAGCATTCACCGAGCAATTGCAAGGGAGATAAGTCAAGTAATGCCAATGCGGCTTACCTCAAAATACATGTTAGTGCCTGTTTTTCTTCTTATTGGAGCTGTGGTAGCATGCATTAAACTTCGGAGAAGAGGTATCCAAGATGGTGGACCTGCATACCAGAAGCTTGATGCGGCGGAGCTTCCTCTTTCGACTGGAGGGAAGAAAGAAGCAGATCAATCTGATCAGTGGGATGACAACTGGGGAGACGAGTGGGATGATGAGGCGCCATTGACGCCAACCAGACATATGCCCAACCTATCATCCAAAGGTCTAGCTTCAAGGAGATCTACCAAAGATGGCTGGAAAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MRWCGLRLLPLVCLLVIAAAAEEDKTNILQADKNNDNNIAHSDGGKTGRHDETNPNTVHHDEGKNDPDGNNKKDKSTEVISTAKYAAAVHHVDKDINTAKSSHVTDFSQDPLIKGCDPSHTCVIENKKFIACLKVPGEDSLALSLLMDNKGMDPLYVGITTPEFVTSAEDTIHVQANDHNETQVTIFNNGAPNMTIILRVAEETCNISIHRAIAREISQVMPMRLTSKYMLVPVFLLIGAVVACIKLRRRGIQDGGPAYQKLDAAELPLSTGGKKEADQSDQWDDNWGDEWDDEAPLTPTRHMPNLSSKGLASRRSTKDGWKD</aaseq>

Gene Sequence

<dnaseqindica>1..69#583..928#1546..1673#2260..2688#ATGCGGTGGTGCGGCCTGCGGCTGCTCCCACTGGTTTGCCTGCTTGTTATTGCTGCAGCCGCAGAAGAGGTAAGGTGTAATATCTTCCAAATTTGTAAGTATTATTTGCATTAAGTAACTGGAGCAAGTAAGGTATAGATAGATGGCTATAGATGCACAGATTTATATACGACTTGGTTGAATGATTACTGATTACTAATTAACTTGTGCTTTGTAATTGTTGGGAAAACGTTGGCTCATTTTAGTTCTGACGAAACATAAAAGCTGTCATCCCTTCTGTATTTGGGATGACTTGAATATTAGATGGCGAGATCATTGCTGGTGATGGTAGCTGTTTATGCTTCAATCCATCGGCAATGCATCTCTATCGCCTTTTTGTGCACTCTAGAGTTCGTGCACTTATTTGTGATTCTCAAGTCGCATGAAAGATTTCGTTGCTCTCACTTAACTTGTGATGGTCAGTCAAAGCTCAATTCACCAATACCTACCATGAAAACTTAATTCGATCCAGTGACTAACAAATGCCATAATCTGTTTTGTTTTCATTGTTGTTGCTGATATGTTGTTTCATTTTGAATTTAGGATAAAACAAATATTCTACAAGCAGACAAAAATAATGACAACAACATAGCACATTCAGATGGTGGGAAGACAGGACGGCATGATGAAACAAATCCTAATACAGTACATCATGATGAAGGAAAGAATGACCCTGATGGGAACAACAAGAAGGACAAATCAACAGAAGTTATTAGCACGGCAAAATATGCGGCAGCTGTGCATCATGTGGATAAAGATATCAACACAGCAAAATCCTCGCATGTAACAGACTTCTCACAAGATCCTCTTATCAAGGGGTGTGACCCATCTCATACATGTGTAATTGAAAATAAAAAGTTCATCGCCTGCTTGAAAGTTCCTGGAGAAGGTGATTTTCTCAGCAACTTTTCTTCTCTAATCTCTGTTAGTGCACCATCATTGTTGTAGTATAGCAGTATACCTGTCTTCACGAAAAGTTCTCATTTCCTTTTTGACAGATCGTTTGCAAATTGTGTTATTGCAGTTATTTTATCTTTGATTTGACCTTGCCTTAATTAGTGCTACCAAATACTGGGTTTGTTGATAAAAAGATTGACACGTAAATTGGTCTGCAACTGTAATTTTCCCCAGTCAGCAATTATTTTTGACCAATTGCAATTCACTATTGTCAACTTATAGCCACGACTAGTGCTGATGAAGTGACAATTGATTGCGTAGTTGGAGCTATCTATACTAACCAAAAACACAATGTCTGGGACCAAATTGAATATGCAATACAACTGCTGTATCACAAGCAAATTTTGCCCCTGACGAATTTAAGCAAATAATGTTTCTGCAAAAGTACCTGTGATGTTATCACCTACCTAAAAAATACTTTGCAAAGATATATTTTCATTGTTTTTTCTCTGAAGGTTTTGCATCACATATGGATATAGTCGTGTTAGTTCTTATTAATTAGATTTTTCTATGTTTTGCACATAAATAACTTGTTACCGTTGAAATCAGATTCATTAGCTCTATCACTTCTGATGGACAACAAAGGCATGGACCCACTTTATGTTGGTATTACAACTCCAGAATTTGTCACTTCAGCTGAAGACACCATCCATGTCCAAGCAAATGATCATAATGAGGTGAGCTAATGCAAATGAGTATCTTGAAGATAATTATAGTAATGAGATTTTCTGGCTTAACTTTTCTTTATGCAATATTTGCATGGTGTTACTTCCACACATGTTATTTCAGAAGAGACTGTCTTTTATATTCTTTATTGATATGAAAGTTTTTCCAGCGAGCTTTTGAGAGGATTATATTGCAGGTTTTCTGGCTTATTTTTTCCCATATGTACTATCTACTGTATGTGTTGTTTCAAAATAGAGTAGCTGTTTTTTGCAAGCTTATAGAAGGATAGTTGCTCTTTACCAAGATCCTGGCTTCATGGTGTCATTAATTTATGTTTTGTCATATAATTGGTTCGTGAGTTATATATTTCACGTGAACCGCGGTAGGTTATTCCCATATTGATTTATATACATGCATAATTGCATTAGCTTATTTTGAGTTCTTGTTGATAGTGTATCTCAGGATTAGCAGAATGTCAGTATACTATTGCTGTTCTTATCAGCTTTTATTCAAGGGGAACTGGATCTTTCTCATGCTGTTTCAATGTTTTCAATCGATGTACTGATCTTCTTTTTTATTTTCATATTGTTAATTTAGACACAGGTGACTATTTTTAACAACGGTGCACCAAACATGACAATAATTCTTAGAGTTGCTGAAGAGACCTGCAATATTAGCATTCACCGAGCAATTGCAAGGGAGATAAGTCAAGTAATGCCAATGCGGCTTACCTCAAAATACATGTTAGTGCCTGTTTTTCTTCTTATTGGAGCTGTGGTAGCATGCATTAAACTTCGGAGAAGAGGTATCCAAGATGGTGGACCTGCATACCAGAAGCTTGATGCGGCGGAGCTTCCTCTTTCGACTGGAGGGAAGAAAGAAGCAGATCAATCTGATCAGTGGGATGACAACTGGGGAGACGAGTGGGATGATGAGGCGCCATTGACGCCAACCAGACATATGCCCAACCTATCATCCAAAGGTCTAGCTTCAAGGAGATCTACCAAAGATGGCTGGAAAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017522