BGIOSGA017531

From RiceWiki
Revision as of 16:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017531

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017531, complete gene.

LocusTag

OsI_21058

Ensembl Transcript ID

BGIOSGA017531-TA

Ensembl Protein ID

BGIOSGA017531-PA

Length

6356

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29789220..29795575

Sequence Coding Region

29795395..29795575,29795092..29795237,29793638..29794488,29792234..29792366,29791573..29791731
,29791054..29791284,29790809..29790910,29790574..29790709,29789711..29789906
,29789220..29789532

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29789220..29795575 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29789220..29795575 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGACGGCTGGGTCTGGGTGCGGCGGCCGGCCGACGACGACGAGGAGGAGCGGCCGCTGAAGGTGGTGTTCGACTCCCCGGCCGAGCACTTCACGGACGCGGCGCCCATCGGGAACGGCAGCCTCGGAGCCATGGTCTGGGGCAGCGTCGCCTCCGAGAAGCTCCAGCTCAACCATGATACCCTTTGGACCGGCGTGCCTGGGAACTACACTGACCCAAATGCGCCATACGCACTCGCTGTTGTGAGGAAGCTCGTTGATGGAGAGAAGTTTGTTGATGCTACAGAGGCTGCCTCTGGCCTTTTCGGTGGTCCAACAGAGGTTTACCAACCTCTTGGAGACATAAATCTGGAGTTTGACTCATCTAGTCTGGGGTATACTTCTTACAAAAGAGAGCTAGATCTACGTACTGCAACTGTTTGCATCAGCTATAATATTGGGGAAGTTCAGTACAGTAGAGAGCACTTCTGCTCAAATCCACACCAGGTTTTTGCCACCAAGATCTCTGCTAACAAATCAGGACATGTTTCTTTCACTTTATCCTTAAACAGTCAACTAAACCACAATGTTCGGATAACAAATGCAAATGAGATGATTATGCAAGGTACATGTCCAGGACGAAGACCTGCACTGCATCACAATGGGGCCAACGATGCTATTGGCATCAAGTTTGCAACTGCTGTTGGGCTGCAGATTGGTGGCACTTCCGCAAAAGTCACAATTATTGATGATCAAAAGTTAAGAATTGATGCTGCAGATTGGGTTGTTTTGCTGGTTGCAGCTGCTTCCTCATTCGATGGGCCTTTCGTGAATCCTTCAGAGTCAAAATTAAACCCTGAAGTAGCTGCTCTAAATACATTGAATATCAGCAGGAATGCTACATTTTCTCAGCTCAAAGCTGCTCATTTGGAAGATTATCAGGGTCTTTTTCACCGTGTAACTCTGCAACTATCGCAAGCATCAATGCTTGAGAAAGATATCTTGGAAGAAGTTGATCATGACGTAAAGACTACAGCAGAAAGAATTAATTCCTTTAGAAGCGATGAGGATCCTTCTTTGGTCGAATTGTTATTTCAGTATGGTCGCTACCTGCTCATTTCCTCCTCTCGGCCTGGGACACAGGTATCTAATCTGCAAGGAATATGGAACCAAGATTTTGCACCTGCTTGGGAGGCTTCTCCTCACCTGAACATAAATCTTGAGATGAATTACTGGCCAACACTTCCTTGTAACCTTAGTGAATGCCAAGAACCACTATTTGACTTGATAGGATCTCTTGCGGTTAATGGAACAAAAACAGCAAAAGTCAATTACCAAGCGAGTGGCTGGGTAACTCATCACGTCACGGACATATGGGCAAAATCATCTGCATATTACGTAGATGCGATGTATGCATTGTGGCCAATGGGGGGTGCCTGGCTGTGTACACATCTTTGGGAAAACTACCAGTATTCACTGGACAAAGAATTTTTGGAGAAAAGAGCATATCCATTACTGGAGGGATGTGCAATGTTTTTAATTGATTGGTTGATCAAGGGACCAGGAGACTATTTGGAAACAAATCCATCTACTTCTCCAGAGCATCCTTTCATAGCTCCTGGTACTGGTGGTCACCTTGCTAGTGTGAGCTATTCAACTACAATGGACATCTCTATTATCCGTGAAGTTTTCCTGGCTGTCATTTCGTCTGCAGAGGTCTTGGGAAAATCTGATACTAATCTGGTTGAAAGGATCAAGAAGGCACTCCCAATGCTCCCTCCAGTTAAAATTTCTAAAGATGGCACGATCATGGAATGGGCACAAGATTTCGAGGACCCAGAAGTCCATCATAGACACCTGTCACATCTGTTTGGTCTTTACCCTGGTCATACTATAACCATGCAGAAAAATCCTGAGGTTTGCAAAGCTGTTGCCAATAGTCTCCACAAACGAGGGGAAGATGGCCCTGGATGGTCGACCACATGGAAGATGGCACTGTGGGCACGCCTTCTGAATAGTGAGAATGCATACAGGATGATCCTAAAGTTGATCACCTTGGTTCCTCCTGGTGGCAAGGTTGACTTTGAGGGAGGATTGTATACCAATCTTTGGACAGCACACCCACCCTTCCAAATTGATGCAAATTTTGGATTCACAGCTGCAATTGCTGAAATGCTGCTCCAGAGCACCCATGGTGATGCTGATCTCTACTTGCTACCAGCACTGCCGCGCGAAAAGTGGCCCAAAGGCTACGTGAAGGGATTGAGGGCTCGCGGCAATGTGACTGTGAACATCAGCTGGGAGAAAGGGGAGCTGCAAGAAGCAACGGTGTGGTCTAGCAACCCAAAATGCACCCTGAGGCTGCACTACGGTGAACAAGTTGCTATGGTGACAGTTTTAGGGGGCAATGTTTACAGGTTCAATGGGGGTTTGCAGTGCGTGGAGACATACATGGCCCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MDGDGWVWVRRPADDDEEERPLKVVFDSPAEHFTDAAPIGNGSLGAMVWGSVASEKLQLNHDTLWTGVPGNYTDPNAPYALAVVRKLVDGEKFVDATEAASGLFGGPTEVYQPLGDINLEFDSSSLGYTSYKRELDLRTATVCISYNIGEVQYSREHFCSNPHQVFATKISANKSGHVSFTLSLNSQLNHNVRITNANEMIMQGTCPGRRPALHHNGANDAIGIKFATAVGLQIGGTSAKVTIIDDQKLRIDAADWVVLLVAAASSFDGPFVNPSESKLNPEVAALNTLNISRNATFSQLKAAHLEDYQGLFHRVTLQLSQASMLEKDILEEVDHDVKTTAERINSFRSDEDPSLVELLFQYGRYLLISSSRPGTQVSNLQGIWNQDFAPAWEASPHLNINLEMNYWPTLPCNLSECQEPLFDLIGSLAVNGTKTAKVNYQASGWVTHHVTDIWAKSSAYYVDAMYALWPMGGAWLCTHLWENYQYSLDKEFLEKRAYPLLEGCAMFLIDWLIKGPGDYLETNPSTSPEHPFIAPGTGGHLASVSYSTTMDISIIREVFLAVISSAEVLGKSDTNLVERIKKALPMLPPVKISKDGTIMEWAQDFEDPEVHHRHLSHLFGLYPGHTITMQKNPEVCKAVANSLHKRGEDGPGWSTTWKMALWARLLNSENAYRMILKLITLVPPGGKVDFEGGLYTNLWTAHPPFQIDANFGFTAAIAEMLLQSTHGDADLYLLPALPREKWPKGYVKGLRARGNVTVNISWEKGELQEATVWSSNPKCTLRLHYGEQVAMVTVLGGNVYRFNGGLQCVETYMAP</aaseq>

Gene Sequence

<dnaseqindica>1..181#339..484#1088..1938#3210..3342#3845..4003#4292..4522#4666..4767#4867..5002#5670..5865#6044..6356#ATGGACGGCGACGGCTGGGTCTGGGTGCGGCGGCCGGCCGACGACGACGAGGAGGAGCGGCCGCTGAAGGTGGTGTTCGACTCCCCGGCCGAGCACTTCACGGACGCGGCGCCCATCGGGAACGGCAGCCTCGGAGCCATGGTCTGGGGCAGCGTCGCCTCCGAGAAGCTCCAGCTCAACCGTACGTTGCCGCTTGCCGTTATTTCTCGGTTTCTTGGCCCTGTTGATGCTGCTCGCAAGGCGTTCGACGAAATGCCCCAGCTGGACTATGCTCATGATAGCGACAGTCTTCTCCTTTTTTTCTTTCTTATGTGTCTCACAGCTGAATGATCTTGTAGATGATACCCTTTGGACCGGCGTGCCTGGGAACTACACTGACCCAAATGCGCCATACGCACTCGCTGTTGTGAGGAAGCTCGTTGATGGAGAGAAGTTTGTTGATGCTACAGAGGCTGCCTCTGGCCTTTTCGGTGGTCCAACAGAGGTATGTGTTTGTGTATGCTAGCCTTGGTATTCTGACTTATGAGTTGCAAATGAGAATATATTTTTCATTTTCTTCTTCTGGTTGATGTGCTAGTTGCATAGAGGATAGATCCTTTATTAGTTAACGAATATGCATATTTTAGCCCTTACATGATCTAGCCTTAAATATAAATGTTCTATATGACTGTACCTCACCAAAATACTCCTGCTCTATGAATTTATACAACGGAAAGATTTGCCTTCGTTTGAAAGAAAAATAAAACTCACCAAAACAATGTTGAAGAAAGCCATAATTTTGTTTCCCTTGTTGCTTATGCATTAAGTAGAACTCCAGAAATTATTTTGTTTGATCTACTTTCTTGAATGTGGAATGATGGCATGCTTATTCAAGAAAACATATGATAGTTTTGAAGAGCTCATACCACAACTGCCATTAAATTAAATTTTTGAATAGATGGTTATTTTATCACGCCACTAGGGATAATGGGTTCCATAAGTTTATAAGGATGGCATGAATCACTGTATGTGCAACATTACAATCAAGTGCAAAGAAATTCATTTAAATGTGAATGAAAAGCTATTTTTACCTTTATTTTCTATGAAGGTTTACCAACCTCTTGGAGACATAAATCTGGAGTTTGACTCATCTAGTCTGGGGTATACTTCTTACAAAAGAGAGCTAGATCTACGTACTGCAACTGTTTGCATCAGCTATAATATTGGGGAAGTTCAGTACAGTAGAGAGCACTTCTGCTCAAATCCACACCAGGTTTTTGCCACCAAGATCTCTGCTAACAAATCAGGACATGTTTCTTTCACTTTATCCTTAAACAGTCAACTAAACCACAATGTTCGGATAACAAATGCAAATGAGATGATTATGCAAGGTACATGTCCAGGACGAAGACCTGCACTGCATCACAATGGGGCCAACGATGCTATTGGCATCAAGTTTGCAACTGCTGTTGGGCTGCAGATTGGTGGCACTTCCGCAAAAGTCACAATTATTGATGATCAAAAGTTAAGAATTGATGCTGCAGATTGGGTTGTTTTGCTGGTTGCAGCTGCTTCCTCATTCGATGGGCCTTTCGTGAATCCTTCAGAGTCAAAATTAAACCCTGAAGTAGCTGCTCTAAATACATTGAATATCAGCAGGAATGCTACATTTTCTCAGCTCAAAGCTGCTCATTTGGAAGATTATCAGGGTCTTTTTCACCGTGTAACTCTGCAACTATCGCAAGCATCAATGCTTGAGAAAGATATCTTGGAAGAAGTTGATCATGACGTAAAGACTACAGCAGAAAGAATTAATTCCTTTAGAAGCGATGAGGATCCTTCTTTGGTCGAATTGTTATTTCAGTATGGTCGCTACCTGCTCATTTCCTCCTCTCGGCCTGGGACACAGGTATCTAATCTGCAAGGAATATGGAACCAAGATTTTGCACCTGCTTGGGAGTAAGTCTTTCAATAAAAGCTTTTGCTTCAGTTATTTGTTGCTGCTTATTCATTTTCTGCTTGTTTTATATCCAGGCAAGGACCGCCTATACTTTCCAAACACAAATATTAAGCTTAAAACATGTACTATTAGTTTGATTAAATTTGAACAGTACCTGGTAACTTTTATTCATATTCATTTTAGTGGTTGTAAACACACATATGAACAGAATGCTTGTTACATGTATGAAGACATTCTTTAGAGTTATGTTTGTTCAGTTGCTTTTCAGTCTTGTATCAAATCATACATGACAAGGATCCTGTATACCATCAGTCATACAGTTGGAGTTTTCAAAATTTTATTGATACCATAGCAATCCTGTGTATTGCAATTGGATTCATTTCATAGTGCCAGTACCAAAAAATCTGTTAATTATGTTTTGTTGCCTGGTTAGATTTTGTAATACATTTCATAAATTGTGTCGGTTGCATAACTCTAACACCTGTTTGTTGTATATATTTTTATAATATGTGGGTAGCATACGCTTACAGTACGCCAATGAGAAATGCAATTTTAATATTTGGAATAAAATGTGTAACTTGTAGTTTGAATATAATTGTTACTGGCTTATGGGCCCCAGATCTAGTGTAGTCACTGTTCATCCGGTTCTACTGCAGCATGGGGATTACTTTCGGTTTGGGAGAAGATTAGTTTATTAGTACCATCTATTTCCACAATACTAGAGATAAGTTTATCTCAGTTTAAGTTAAATATCTAGGTAAGGATGGAGTTGCATTTGCTTTCATTAAGCAATGAGAAATCAAGAGTAAAGTCCCAGAGTCTCTTATGACAGGGTGAAACCCTGCAGCAGATAGAAGAGGGAGAGTACCCCTGATCCAAGTCCTTGTAACCATACCCAGCATGTGCCATAACATAATATAAAGAAAGAGTAGTCATAGATAGTTTTTGTCCACCACTCACATTCTTTTTTTTTTAACAAAATTGAATAGTTGCATTGTTTCTACGATTTATCTGATACATGTAGATCCTTCTCTTTCTTCTCTCAATTGTGGGAATCTCTGGGAATGTATTTTGCATTTTTGGGTCAATTTTTAGATTTCTGCATCTTTGAGGGAGGCACCTTTAAACTTATCTGTTGATTATATAGATGTCCTGAGAAGCCCCTTGCCTTTACAGTAAAAAGTTACCTTAGCTGAGTTGCCTGATATCATATTTTCTACTTCGTTTGTGATCTGTTTATGAATCAAGTCTCATGCTGTTTAATTTTCAGGGCTTCTCCTCACCTGAACATAAATCTTGAGATGAATTACTGGCCAACACTTCCTTGTAACCTTAGTGAATGCCAAGAACCACTATTTGACTTGATAGGATCTCTTGCGGTTAATGGAACAAAAACAGCAAAAGTAAGTTATGGACTATACTCCTTTCTTGTTTGGTTTCAGTGAAAAGTAAGGTTACTTCAAATATAAGTAGCATGAGAAAAAGGTGAAGATTTGATTGTTTTAGATTCGACTCAAAAGCAATAGTGAAATTTCTTCATTTGCATCATCATATAATGTTTGCTTGATAATGAGCTGACATTTACTACATAAACAGTTAAACATAGTCACCAAACTTCCTACTATAGTGTCAAACTTCATTCTATAGTGTCATTGTTAACATAAAAGAGAAAAAAACGGTATTCGATTGCTAACATATTATATAATTCTTATGTTTTTATGATGTGCTTAGGTAATGTTGCAAGAAAACTATGAATGTAAGTTACATAGCGCCTAGAGGAGAACAGTGGATTTTGTTCCCATTATAAAGCATCATTCATGTTTATAACAGATAAAACAAAGAATAGTTATAAACATGGTTGATCTCTCTTCTCACCATGGTTGGAATTACACTGTTTTGTCATAGGTCAATTACCAAGCGAGTGGCTGGGTAACTCATCACGTCACGGACATATGGGCAAAATCATCTGCATATTACGTAGATGCGATGTATGCATTGTGGCCAATGGGGGGTGCCTGGCTGTGTACACATCTTTGGGAAAACTACCAGTATTCACTGGACAAAGTAAGGACTAGCTGTGCTAATTGCTATCATTTGTACTTTATTGACTTCCCCGTCTTATTTTGCATGGATCATCTCTGGTTACAAGCTCATTTTTTAATTAATATTATTTTAGTACATCATTTTTATGTTTATAGTGTGCAAGTTTTAGCTCATATATTTTGGATATTCCCACAAATATTTATTGCCCAGATCTGTAATTTATTGTGTTCAGGAATACTTGAGTTATCCAATTTAAATAGTGAATAAATTCCTTCAAAAATATATCTGTCAATGTTGTTTGTCTTCTAGGAATTTTTGGAGAAAAGAGCATATCCATTACTGGAGGGATGTGCAATGTTTTTAATTGATTGGTTGATCAAGGGACCAGGAGACTATTTGGAAACAAATCCATCTACTTCTCCAGAGCATCCTTTCATAGCTCCTGGTACTGGTGGTCACCTTGCTAGTGTGAGCTATTCAACTACAATGGACATCTCTATTATCCGTGAAGTTTTCCTGGCTGTCATTTCGTCTGCAGAGGTAATTCCATCCTTGCTAGTTTCTGTGCTGTAATTAGAGATATGGATTGAATCTGACATTCCTCTTGAGGAAAAGAAAGATCAATGTTGGTATATTTGGGAACTTCTATTCTGTAAACCGAGTGTTGATTCAATGATCAATAGGTCTTGGGAAAATCTGATACTAATCTGGTTGAAAGGATCAAGAAGGCACTCCCAATGCTCCCTCCAGTTAAAATTTCTAAAGATGGCACGATCATGGAATGGGTAAAAGTTCAAATCTGCAGGAAGCTAATCTATAGTTTCTGTTAAAAAAAAGTGATTTACTAATACATATTGGCCATCTACAATGTGTTTTGAATGCAGGCACAAGATTTCGAGGACCCAGAAGTCCATCATAGACACCTGTCACATCTGTTTGGTCTTTACCCTGGTCATACTATAACCATGCAGAAAAATCCTGAGGTTTGCAAAGCTGTTGCCAATAGTCTCCACAAACGAGGTTTGCAGAACTCAATGAGCAACTTCATGGTCTTTAATATGGAAAAGTTATGGATATTGGTGCTCTACTAATCACATTTTCAGATGATGTCTAAGGTTTTCCAAAAACTTCTAATGAGCTTACACAGAATAACCAGTTAGGAACCTGGTGGTTTTGCTTATAACATATCAAATAAATACTACCATAAAGATATATAGTACATTCTTTATTCTGTGCTTGATGTGTTGCGATCATGGTTGCAAATTCCATATCTAGGATCTCCTAAACCCTATGCGCTACTAATTTCTGGTTACAGCCAGAACCAAGAGATCTACCACCCTTGTGATTGTTTAATGTCAATTTATTTTAACCAAGCACGTGGACTAATCATGTGGGATTGGTCAAATGATGGCAACAAATTCCATAGCAGGGTAAATGAACAGAAAATAACTAAGAGTATATGTAGAAAAAATAAATAAACTATTAGACTTCAAATTTGTTATGATTCCCTCATGAGTATTGACTACCAAGGAATATATTTGTGGAATATAAATTTTGGCAAGAAAGAGGATGAACATGATTTGCCTTAAAAAATATTTTCATGAACAATGGTTGATTACATTAAGGAAAATTAGAAGAATAATTTTACCCAGGGCAAGTAAGTTAATCATGGCTGCTTGCTTATCAGGGGAAGATGGCCCTGGATGGTCGACCACATGGAAGATGGCACTGTGGGCACGCCTTCTGAATAGTGAGAATGCATACAGGATGATCCTAAAGTTGATCACCTTGGTTCCTCCTGGTGGCAAGGTTGACTTTGAGGGAGGATTGTATACCAATCTTTGGACAGCACACCCACCCTTCCAAATTGATGCAAATTTTGGGTACAAATTTCTCACCTTTTTAGTTACTTTATTTTGGTCAATGACTATCATTTATTTCTTGCTCTTCCTAGTAAGTTCCACTTGCTTGTAAATTTAACGAGTATTGATCCATGTTCCTGGAGCAAATACTTGTAACTAACTTGTGCTTATTGGTATGTCCCCAATTCTTCACTTACAGATTCACAGCTGCAATTGCTGAAATGCTGCTCCAGAGCACCCATGGTGATGCTGATCTCTACTTGCTACCAGCACTGCCGCGCGAAAAGTGGCCCAAAGGCTACGTGAAGGGATTGAGGGCTCGCGGCAATGTGACTGTGAACATCAGCTGGGAGAAAGGGGAGCTGCAAGAAGCAACGGTGTGGTCTAGCAACCCAAAATGCACCCTGAGGCTGCACTACGGTGAACAAGTTGCTATGGTGACAGTTTTAGGGGGCAATGTTTACAGGTTCAATGGGGGTTTGCAGTGCGTGGAGACATACATGGCCCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017531