Os07g0617800

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0617800| Description = Similar to Alanine aminotransferase| Version = NM_001066819.1 GI:115473370 GeneID:4343916| Length = 2315 bp| Defini...")
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Gene Name

Os07g0617800

Description

Similar to Alanine aminotransferase

Version

NM_001066819.1 GI:115473370 GeneID:4343916

Length

2315 bp

Definition

Oryza sativa Japonica Group Os07g0617800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26153146..26155460

Sequence Coding Region

26153371..26153487,26153605..26153808,26154065..26154139,26154214..26154368,26154441..26154561
,26154683..26154757,26154953..26155090,26155354..26155458

Expression

GEO Profiles:Os07g0617800

Genome Context

<gbrowseImage1> name=NC_008400:26153146..26155460 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26153146..26155460 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgatgcaattattgataagatctgagaatgatggcattctctgccctattccgcaatacccgctctactccgcgtcaattgctctccatggtggttctcttgttccttatttccttgatgaagagacaggttggggactggaggttgatgagcttaagaaacaattggaggaggctcagtctaagggtatcactgttagagcacttgttgttataaatccagggaacccaactgggcaggttcttgctgaggaaaatcaaaagaaaattgtcgaattctgcaaaaatgaaggacttgttcttcttgcagatgaggtgtaccaagaaaacatatatgtagaagacaagaaattccattctttcaaaaagatcgcacgatcaatgggatacacagatgatgatcttcctttagtatcattccaatcagtttcgaaaggttactacggagaatgtggaaaacgaggaggctatatggaagtaactggatttagcgctgatgtaagggaacaaatttacaaggtggcatcagtaaacctgtgttccaacgtgtctggccaaatactcgctagcctcataatgaacccaccgaaggctggggatgaatcctatgaatccttcatggtagagaaagacgggatcctctcctctctggctcgacgtgcaaaggctttggaagaagccttcaacagcttagaaggcataacatgcaacaaggccgagggtgcgatgtatctcttccctcgcatctatttgccccagaaggcaattggagctgcccaagcagctggtactgccccagatgcgtattatgcccgccgccttcttgaagctactggaattgttgttgttcctggttctggatttgggcaggttcctggaacgtggcattttagatgcacaattttgccacaggaggacaaaataccagcgatcatatccaagttcaaggagttccacgagaagttcatggatgaattccgggattaa</cdnaseq>

Protein Sequence

<aaseq>MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEET GWGLEVDELKKQLEEAQSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVL LADEVYQENIYVEDKKFHSFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYME VTGFSADVREQIYKVASVNLCSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSL ARRAKALEEAFNSLEGITCNKAEGAMYLFPRIYLPQKAIGAAQAAGTAPDAYYARRLL EATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIISKFKEFHEKFMDEFRD</aaseq>

Gene Sequence

<dnaseqindica>1974..2090#1653..1856#1322..1396#1093..1247#900..1020#704..778#371..508#3..107#acatgatgatgcaattattgataagatctgagaatgatggcattctctgccctattccgcaatacccgctctactccgcgtcaattgctctccatggtggttctcttgtatgtactatgacaatgcttataacgctatacaattatgtttttcttgtttagagcaacaaatccaggcaatgctttgaattatatcctttgtcgaattttgggttcaactcaatttaaatttacaatgaagtgataatcacccattggttttgctttgtacataatgtggttttggcattatattattaggaatccttcaaacttgcagcgatgcatgcccatgtctgatgacttaatatacagaacatatccaatttcaggttccttatttccttgatgaagagacaggttggggactggaggttgatgagcttaagaaacaattggaggaggctcagtctaagggtatcactgttagagcacttgttgttataaatccagggaacccaactgggcaggtggttatgatttattaacttatcatacatttacagaaggccaataccttgcataaaaaaatctacttcataagatatcaattctgtctattggaacatggtgaatagatactttagaagaaaccttcacttcctttttaccatcaagaatcatggtcttggagtggttacttatcccgtttctactttcatcaggttcttgctgaggaaaatcaaaagaaaattgtcgaattctgcaaaaatgaaggacttgttcttcttgcagatgaggtgagttcagcactttttgtatgcgagagcttgaaacatttgagttttgatgagctatttgaacacttcctgtgagttgggtaggtcttgtaagctcacttgttgattcattccttgaaaggtgtaccaagaaaacatatatgtagaagacaagaaattccattctttcaaaaagatcgcacgatcaatgggatacacagatgatgatcttcctttagtatcattccaatcagtttcgaaaggtaattatattcttcagttatttgtatttgcatctccaagcatatggtaaatcttactgtttatacaattaggttactacggagaatgtggaaaacgaggaggctatatggaagtaactggatttagcgctgatgtaagggaacaaatttacaaggtggcatcagtaaacctgtgttccaacgtgtctggccaaatactcgctagcctcataatgaacccaccgaaggtctgatagcttgttcgcaaagcaattattaagttaaattatggcagtaatttacaaggttgcttcttccacaggctggggatgaatcctatgaatccttcatggtagagaaagacgggatcctctcctctctggctcgacgtgcaaaggtttgtctcacttgttgtaatggtggtaaacaatattcactgctggaactgtgaatttagaactgctgctgcttcacctgtgtattatgccaaaacatggaaaaaaaatccagaatactgttactggcgtttagtgctaataaagtaacactcagatacacaaacatagcttgtggaaataactttcttctaatctaagctactgtttgaagtatcaagcaccttctcattgtttggtcctctccattttacacaggctttggaagaagccttcaacagcttagaaggcataacatgcaacaaggccgagggtgcgatgtatctcttccctcgcatctatttgccccagaaggcaattggagctgcccaagcagctggtactgccccagatgcgtattatgcccgccgccttcttgaagctactggaattgttgttgttcctggttctggatttgggcaggtaggtttatctcaaatgcatggcatttccgaaaacaattaggctcttgttggttcaaaacactgttgagttcttactgatattattctgttgacttatcttgtgatgtgaattcaggttcctggaacgtggcattttagatgcacaattttgccacaggaggacaaaataccagcgatcatatccaagttcaaggagttccacgagaagttcatggatgaattccgggattaagaatctcgtaaactgaaaaattgctggcattggatgtacttctaaaacttggcttttctgccttctgtcaaaggcaatgccatcaacttcaaatcaaaataataagaccatccattcgcaccaccctggattggtcagtgtaactcctcctcagctcttgttaggtcgaatgaaaacctgcaaaatcctggagaattgcttacttgcaaaaagaagttaaaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0617800, RefSeq:Os07g0617800