BGIOSGA017563

From RiceWiki
Revision as of 16:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017563

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017563, complete gene.

LocusTag

OsI_20982

Ensembl Transcript ID

BGIOSGA017563-TA

Ensembl Protein ID

BGIOSGA017563-PA

Length

2126

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29316439..29318564

Sequence Coding Region

29318493..29318564,29318133..29318243,29317897..29318007,29317451..29317590,29316663..29316745
,29316439..29316587

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29316439..29318564 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29316439..29318564 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGTGAAGCAGCTTGAGGCGGCGGCGCTGGAACTGGTTGCTTCGTGCGAAGATTGCACGTGCTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGATGACGGATTTCGAAAAGCTGATCGAGGCTGAGGTTAACAAGGTCAAGGGGAACTCATCAACATCAGTAGAGAACCATCTGCTCATTCGGCAGTTCAGAGAGGCAGTTTGGAATGTTCACCATGCTGGCCAACCAATGCCTGGTGATGAACAAGAGGATGTTCTTATGACCAGTACCCAAACTAGCATCTTAAATGTCACGTGCCCATTAACTGGGAAGCCTGTAATTCAATTGACAGAACCAGTTCGATGTGCGGATTGTAGGCACATATATGAAAAAGTTCCAATTATGCATTACATAAGAAATCAAAAACCTCCGAAGTGCCCTATCGCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAAGATTTAACTGACGACGAGGATGACAGCAATGAATGA</cdnaseq>

Protein Sequence

<aaseq>MSSVVNKLTNAAERESSEAETLIAVKQLEAAALELVASCEDCTCYADAIRKVPGAYQPSNQMTDFEKLIEAEVNKVKGNSSTSVENHLLIRQFREAVWNVHHAGQPMPGDEQEDVLMTSTQTSILNVTCPLTGKPVIQLTEPVRCADCRHIYEKVPIMHYIRNQKPPKCPIAGCPRVLQVGRVTCDSLLQVEIDELRSSGPSAPDAENIEDLTDDEDDSNE</aaseq>

Gene Sequence

<dnaseqindica>1..72#322..432#558..668#975..1114#1820..1902#1978..2126#ATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGTAAGAATCCCCACTCGGCTGCCCGCTCTCCGCTAAACCCCCAAAACCCTAGCAATCTCATCGAATCCCCCCCCCAAAACCCACAGGAGATTCGCAAGGCGATCGGCGAAATGAAGTCCATCGCCATCGATTACGAGAGGGAGAACAAGTCCGACAAGGCACGCGGCCTCTCCCCCCACATTAACCTCACGCGGCGTTGTGCCGCGGAAACCCTAAACCCATAACCACCATCGTTATCCTCTTTTGCAGGTGAAGCAGCTTGAGGCGGCGGCGCTGGAACTGGTTGCTTCGTGCGAAGATTGCACGTGCTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGGTGCGGACTCTGGTAGCCGCGATGATTATTTTTTTGGTTTCAGGGGCTTATTCGAATTGTATTGGAGGAATTTAGGCTAAATGGTTATTTGTTGTTTTGGTATTGATCACTGAATTTGTGTCAAGATGACGGATTTCGAAAAGCTGATCGAGGCTGAGGTTAACAAGGTCAAGGGGAACTCATCAACATCAGTAGAGAACCATCTGCTCATTCGGCAGTTCAGAGAGGCAGTTTGGGTATGTTCCGTGGACCCTTTGTGTTTTGAGAGACTTGGCAATTTTCTATGCGGTAGATCAGGAATTAGAGGAATTTACAAATGTTAATTCTCCCTTAGTGCTAATGGCTGTTGAGAACGGTATGGATTATGTACTTTTTTGCCTATATATTCACTGAGTTAGCTCGGTGCTGAACTATTGCTGAAAATGTTACATTAAAGATGGATTGAAATGACTGCAATTTTTAGGTCATGTTTGGAGAAAGTAAAAGGTTTGTGCATTACTTCTAATTATTTTCTCTCTCTGTAATTGTGTTGTCTTCTACAGAATGTTCACCATGCTGGCCAACCAATGCCTGGTGATGAACAAGAGGATGTTCTTATGACCAGTACCCAAACTAGCATCTTAAATGTCACGTGCCCATTAACTGGGAAGCCTGTAATTCAATTGACAGAACCAGTTCGATGGTAAGTGTTAAGCAGTTAAACTGTTAAGGCATGGTTTTGTTTTGTAACTCTAGGAAATTTTTATTATGATATGTTACATATGCTAGATAGTTTCCTTCATGGTTGTTCAAAGAACACATACTCTCATTTTGTTTTTAAGCACAACTTAATGTCCCAAAAAATATCCATCATTAATCTGATTTCACCTGCTAAAGACCAAGTTTTTGTTGGCACAAATAACATGTCGCAAAGCCTTAGGATTATGTTTCTCCAATTTTCTTTTGCTGCCCAAGTTGAAATCATCAGGATCTGTTTCCTTCTCCATATGGTTTGCATCTTGCGGTAACAATGGCTTGTCTTTCTGTGAAAATTCCATGCAGTAGAACAAGTTTGCTGTTGTCACTGAATAATCATCATTGTGTTCAAAGTATAATAGCGTATAGCTTTCTGGGGGCAGAAATAGTGCGGTTTCTACCAGTACAATCCTTTCAGCCAATTTGACTATTAGGCATGATTCAAACTAATCATTCCCCTGTATGTAAGGTCTTTCTACAGTTTTACTATTCACATAATTGAATTCAAATCGGAAACTCCTACTACTTAATTTGCTTATTTTTCTCAGTCAAATGGATTTCTCCTAAGTTGTTGCATGTAGAAAGCAGTGTGAACATATATTTGCAGATATTCAGTTTTTGCGTTGAACTCAAGGCTATTTGTGTTGTTCAGTGCGGATTGTAGGCACATATATGAAAAAGTTCCAATTATGCATTACATAAGAAATCAAAAACCTCCGAAGTGCCCTATCGCAGGTAGGCCATTTGTTCGCTGCCTCATTGTTTATTTTCTTTTCACGGATGCTCATTTCAGATTGTATGTTCAACCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAAGATTTAACTGACGACGAGGATGACAGCAATGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017563