BGIOSGA017667

From RiceWiki
Revision as of 16:16, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017667

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017667, complete gene.

LocusTag

OJ1741_B01.1

Ensembl Transcript ID

BGIOSGA017667-TA

Ensembl Protein ID

BGIOSGA017667-PA

Length

2901

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27944824..27947724

Sequence Coding Region

27947366..27947724,27944990..27945926,27944824..27944856

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27944824..27947724 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27944824..27947724 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCCGCGGCGGCGGTCGGCGTCGTCGCCTTGCTGTTGTTGCTGCCGCTCGCCGCGTCGGCGTACGGCGACGGGCTGGGCCGCGCGGCCGTGGGGGTCAACTGGGGCACGATGACGTCCCACCCCATACTCCCGTGCGAGGTGGTGCGGATGCTGGCGGCCAACGGCGTCGCCCGGGTGAAGATGTTCGACGCCGACCCCTGGACGGCCGCGCCGCTCGCCCACACCGGCATCCAGGTCATGCTCGCCGTCCCCAACGACCAGCTCGCGCGCCTCGCCGGCGACCCGCGCCGCGCCTACCGCTGGGCCGAGCAGAACGTCTCCGCCTACCTCGAGGCCGGCGTCGACGTCAGGTATGTGGCTGTTGGCAATGAGCCTTTTCTAAAGAGCTACAATGGCAGCCTAATCAATGTAACCTTTCCTGCGCTCAAGAACATGCAAAGAGCTCTAGACAAACTTGGTTTAGGTGATCATGTAAAGGCAGTTGTCCCACTCAATGCTGATGTCTACAACTCCCCTGAGAATAAACCAGTGCCATCAGCTGGGAGCTTCCGCAAGGATATCAATGCCCTCATGGTTGACATTGTCAATTTCCTCAATATGAATAATGCACCCTTTGTTGTTAACATCTACCCATTTCTCAGCCTATACCAAAATCCAAACTTCCCACTCAATTTTTCCTTCTTTGATGGTGGTAGCAAGCCAGTTTATGACAAAGGTATGGTCTACACCAATGTGTTTGATGCCAACTTTGACACCCTTGTTTGGTCACTAAGGAAGGCTGGTGTGCCTGACATGAAAATCATTGTTGGTGAGGTTGGTTGGCCAACTGATGGTGATAAACACGCAAATGTGAGATATGCACAGAAGTTCTATGATGGTTTTCTGAAGAAGATGGTCAGAAACATTGGGACACCTCTCAGACCTGGTTGGATGGAAGTTTACCTATTTGCACTGATTGATGAGAACCAGAAGAGTGTACTGCCTGGGCGCTTTGAACGTCACTGGGGACTACTCACATATGATGGAAAACCAAAGTTCTCTATGGATCTCAGTGGAGATGGCCTAGACAATCTGGTTGGAGTTGAAGTGGAATATTTGCCAGCACAGTGGTGTGTTTTCAACAAGGATGCAAAGGATAAGTACAAAGACTTGCCAGCCGCTGTAAACTACGCATGCTCAAATGCAGATTGTACACCACTGGGCTATGGATCCTCCTGCAATAATCTTAGCCATGACGGCAACATATCATATGCATTCAACATCTATTTCCAAACAATGGACCAGGATAGTCAGAGACAATGGAGGACCGGTAAGTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAVGVVALLLLLPLAASAYGDGLGRAAVGVNWGTMTSHPILPCEVVRMLAANGVARVKMFDADPWTAAPLAHTGIQVMLAVPNDQLARLAGDPRRAYRWAEQNVSAYLEAGVDVRYVAVGNEPFLKSYNGSLINVTFPALKNMQRALDKLGLGDHVKAVVPLNADVYNSPENKPVPSAGSFRKDINALMVDIVNFLNMNNAPFVVNIYPFLSLYQNPNFPLNFSFFDGGSKPVYDKGMVYTNVFDANFDTLVWSLRKAGVPDMKIIVGEVGWPTDGDKHANVRYAQKFYDGFLKKMVRNIGTPLRPGWMEVYLFALIDENQKSVLPGRFERHWGLLTYDGKPKFSMDLSGDGLDNLVGVEVEYLPAQWCVFNKDAKDKYKDLPAAVNYACSNADCTPLGYGSSCNNLSHDGNISYAFNIYFQTMDQDSQRQWRTGKC</aaseq>

Gene Sequence

<dnaseqindica>1..359#1799..2735#2869..2901#ATGGCGGCCGCCGCGGCGGCGGTCGGCGTCGTCGCCTTGCTGTTGTTGCTGCCGCTCGCCGCGTCGGCGTACGGCGACGGGCTGGGCCGCGCGGCCGTGGGGGTCAACTGGGGCACGATGACGTCCCACCCCATACTCCCGTGCGAGGTGGTGCGGATGCTGGCGGCCAACGGCGTCGCCCGGGTGAAGATGTTCGACGCCGACCCCTGGACGGCCGCGCCGCTCGCCCACACCGGCATCCAGGTCATGCTCGCCGTCCCCAACGACCAGCTCGCGCGCCTCGCCGGCGACCCGCGCCGCGCCTACCGCTGGGCCGAGCAGAACGTCTCCGCCTACCTCGAGGCCGGCGTCGACGTCAGGTACGTACGCGCCCCCACTGCTGCTCTCGCTCGCTCTACGGGTGGTGTGCTATGGTTTGCCTCGGCCGCCGGCGCGGTGTCGCGTGTGCTTCTAGTTTGCGGCTGCATGCCAAGTGTTCGGTGTTGCGTGCGGTGAGACGATGCGGCTCTTACTCTGAGCGCGGGCGTGCGAGCTAGGTGAGGGTATGGAATGTCTGTTCGGGCGCGTCGAAAGTGTTCGACGGAATTCCACCGTTGGACATGCAGTTTCGTGTAACCGTGATGTCCGTGATCGATTGATCGTGTAGTGCCTGTCTGTTTGATCGGATGGTGCTGTGAGTGTGAGATGCACATGCATGCTTGCATTTGTGGTTCATGCAGAATGGATAGTTTTCTGTTGTTGCAGTGCTTCCTGGGTGGCTGGGTTAAGGTTCCCCTGTCGCCTGAAAGACATGAGTGTTAATTAGACATCACTTACAATCGTGTCACTTAGATAAATACAGTAATGTATCCTGCATCATGCAATTAGTTTCATACTTCATGCATATATTGCATATGGGTGTGTAGCAGTAGCCGTACTGAGGGGATGTTTGGTTGATGCCTAACCTTGCCATAACTAAGTTTAGACTAGTTGTGGCATGGTGGCATAAATGTGGCTTAGAAATAGTTGGCCACAAGTGTGGCATGCTTAGCTCTAAATTTGAGAGCATGACATGTGGGTCCCAAAGTTAAGAAAGTGTGGCATAACACAATTGCGGCAGCGAACCAAACACATGCCTAAAAAACTGTGGCATGGCTAAAGTGTGGCGTGGCAAAGTGTGGCAACCAACCAAACAGCCCCTCAAATCTGTTTTGTGTATGATACCTCAGGGTCGAGAGTTAACGTTGTAAATGTTGGAGAAACATGCTTTGATTGGTTTATGGAATACAGTGTGTTTAGATCATGTTCCCTCTGTTGATGGTGTTTATATGGTTCCATGGATGTTGACTGAACTAGTTCATTGAGGAAACCTATTCAAAATGTGGAGTAAGTAAACGCAGGAATGAGCCGACAATTGGATTACCATTTCTAGGCTTCTAATTGTAGATGCCAACGGAAGCCAGAATGAACTTGTATTTATGATATTTAGAGCATTTTAATCCTTAATTGTGCTGAATTTACTGTGGAAATTTAGGTGTGTTTTTATTGGTGAAGAACAGTAGGAATTCAGTGGATTTCATTGACTTAATTCCTACTGGATTTCAGTGACTCCACTTTCTAGCAATTCCTTTTGTAATTACTGTGCTACTTAAGTTTATCATGCATGATGTGCCAAACTGAGCATATCTCTATGAATCCGATGGGCGATGGTGTGTTGCATATAAAATGTATGTACTTGCCTAGTTACTTATTTCTGAATATTCACATTGTCTTTGGTGATACTCTCCTGTTATATTCACTGGTTATGTTAATTGCTCAGGTATGTGGCTGTTGGCAATGAGCCTTTTCTAAAGAGCTACAATGGCAGCCTAATCAATGTAACCTTTCCTGCGCTCAAGAACATGCAAAGAGCTCTAGACAAACTTGGTTTAGGTGATCATGTAAAGGCAGTTGTCCCACTCAATGCTGATGTCTACAACTCCCCTGAGAATAAACCAGTGCCATCAGCTGGGAGCTTCCGCAAGGATATCAATGCCCTCATGGTTGACATTGTCAATTTCCTCAATATGAATAATGCACCCTTTGTTGTTAACATCTACCCATTTCTCAGCCTATACCAAAATCCAAACTTCCCACTCAATTTTTCCTTCTTTGATGGTGGTAGCAAGCCAGTTTATGACAAAGGTATGGTCTACACCAATGTGTTTGATGCCAACTTTGACACCCTTGTTTGGTCACTAAGGAAGGCTGGTGTGCCTGACATGAAAATCATTGTTGGTGAGGTTGGTTGGCCAACTGATGGTGATAAACACGCAAATGTGAGATATGCACAGAAGTTCTATGATGGTTTTCTGAAGAAGATGGTCAGAAACATTGGGACACCTCTCAGACCTGGTTGGATGGAAGTTTACCTATTTGCACTGATTGATGAGAACCAGAAGAGTGTACTGCCTGGGCGCTTTGAACGTCACTGGGGACTACTCACATATGATGGAAAACCAAAGTTCTCTATGGATCTCAGTGGAGATGGCCTAGACAATCTGGTTGGAGTTGAAGTGGAATATTTGCCAGCACAGTGGTGTGTTTTCAACAAGGATGCAAAGGATAAGTACAAAGACTTGCCAGCCGCTGTAAACTACGCATGCTCAAATGCAGATTGTACACCACTGGGCTATGGATCCTCCTGCAATAATCTTAGCCATGACGGCAACATATCATATGCATTCAACATCTATTTCCAAACAATGGACCAGGATGTTAGGGCATGCTCTTTTGAAGGCCTCGCAAAGATCACAACGATAAACGCATCGCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGTTGTGTCCATTCTTACATAGAGTCAGAGACAATGGAGGACCGGTAAGTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017667