BGIOSGA017832

From RiceWiki
Revision as of 16:16, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017832

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017832, complete gene.

LocusTag

OsI_20402

Ensembl Transcript ID

BGIOSGA017832-TA

Ensembl Protein ID

BGIOSGA017832-PA

Length

6191

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25388083..25394273

Sequence Coding Region

25393932..25394273,25392819..25392884,25391386..25391640,25391191..25391297,25390295..25390481
,25390081..25390187,25389862..25389954,25389665..25389751,25389420..25389555
,25389075..25389240,25388767..25388891,25388083..25388451

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25388083..25394273 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25388083..25394273 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCACTGCGAGCTTGGCGCACCCTTTAGCGAGCTCGAGCTCGAGCTCTACTCGTGTGGAGGTGGAGGTCATGGGCGATGTTTTTGTCAGCAGCGACGACATCGCACGGAACCTCATCATTGACTATGGCTCCGGCAAGATCGCGCTCACCGCCGCCTGCATCCACTTCCGTATCCCTGGCGCTGCCCTCAACTCCCCCTTCCACCACTGCGTCGCTTCGGTCCTCCCAACAATTGCTTTGCTGTCACTACCACCGAAGAAGAAGCCACTTCCGCCGCTGTCACCGATGGCGGTTGCTAAGAGGAGCCCACAACCCCCTCAGCCTTTCGTGCTTCGGCCAGGTTCTCACCATAGTTTATTTCCAACGGTTTTCCCTGAGGAGAAAGGAGAAGACTTGGAATATACAAATAAGACAGCATTGGCTGCAGAGGGTTCAAATGAGAAAGCTGCGATAGATGCAAATGAAGTTTCATTGCCTCTTTCTAATCTAAGCAACACTCGACAACATTCTGATAGAGAAAACAACATGCCTGGAAAACATGGCAACGATGGCATGTCAAAAGACATGGGACGTGCTACTAGATTGAAGAGACTGCAAACGCCAATCAACTTATTTGAAGATGAATGCGTTTTCTGCCATTCATTTAGAACACCTCCTCAGTTTCATGGTCCAATGGCGCATTATCAAAAGGGAAAGCTTGTGTCCAGTGACAATGGCAGTCCATGCCCAACAGATATCATTTATGTTCATAAGAAATGCCTGGAGTGGGCCCCGCAAGTATTTTACGAAGGTGATACCATTGTGAACTTGGAGTTGGAAATAAAACGTGCCGCGAAATTGAAGTGCAAAAGATGCAAGCTTCCTGGAGCAGCTCTTGGGTGTTATTATACAAAGTGCAATAGGAGCTATCATGTTCCATGTGCAATGATGACTTTGAATTGCCGCTGGGATGTTGATAACGGTTGTGTTATGTGCCCTGAACATGCAACGATGCCACTACCATGTGATAAGATAAGCTCGCCAAGAAATGAGAGTGGCAATTCTTCTTCCTTCCCTCAGAGCCAATCGTCAATTGAACAAAGCGATTCCGCTGATTGCGAATGGGAATATCCTATAATAGATCAATGGAACACATCAAGTTCTTTGTCTCAAGGACAAAGTTCAGCCAAAGAAGGAATTTCTGCTGTTCCTAAAAGGGAAATAGATCAACTTAACACTTCATGTTCTTCCTTTCCTGAGGGCCAATACTTGGACAAAGAAGGAATTTCCACTGACGAATACAGGAAAGAAAAGCAAACAGATCACCTTTACACAGAAAGAGATTGCCCCTCGGATCTGTGGGTTTTGCTTGGTTCAGCTTTAAGTGAATCCGAGAAGGATTCCTTGCAAGAGTTTGCGTCTTGGACAGATGCAACTGTGGTCAACGAATGGACTGAAAATGTGACCCATGTTATCGTTGGAAAAAGTGCTGGTAGTGCATGGAGCCGATCTTATGAGGTCCTGATGGCTCTACTGTTTGGGAAATGGGTTGTCACGGTTGGATGGATTATGGATTGCTTGGTAAAGTTTATTCCAAGTCCAGAAGCTTCCTTTGAGTTAAGATTTAGCCATGACTCACGTGCATCAATTGGTGGAAACAAGAAAAGAAGAAATCAAGCTTCTGAAGGGGCACAGAAGTTGTTCTCGGGACTGAACTTTTGCCTCAGTGTCTACATAAACCCTGACGACAGACAACACATACAGAGCCTGATTGCAGCTGCTGGAGGGCAGATACTGGAGACAAACGGCGGCTCGCATTCGCTGCGCGAAAACCTGGAGAAAGTTGCTGTGAAGCCATGCTACTTCGTCTACGACGGGGGCGCTCCAAGGGTTTTCACCCAAGGATTGCTTGATGATCTCCCTAAGGAGATGGAAGAGGGCAGAGAGTATGCTGCCTGTGGAGCTCAGGTGATCAGCCATTTGAGGGTGTTTGATGCCATTGCGGCTTATGATGCACAGATTCTCAGCCACAAGGATCACTTCACCCCGGATGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MTTASLAHPLASSSSSSTRVEVEVMGDVFVSSDDIARNLIIDYGSGKIALTAACIHFRIPGAALNSPFHHCVASVLPTIALLSLPPKKKPLPPLSPMAVAKRSPQPPQPFVLRPGSHHSLFPTVFPEEKGEDLEYTNKTALAAEGSNEKAAIDANEVSLPLSNLSNTRQHSDRENNMPGKHGNDGMSKDMGRATRLKRLQTPINLFEDECVFCHSFRTPPQFHGPMAHYQKGKLVSSDNGSPCPTDIIYVHKKCLEWAPQVFYEGDTIVNLELEIKRAAKLKCKRCKLPGAALGCYYTKCNRSYHVPCAMMTLNCRWDVDNGCVMCPEHATMPLPCDKISSPRNESGNSSSFPQSQSSIEQSDSADCEWEYPIIDQWNTSSSLSQGQSSAKEGISAVPKREIDQLNTSCSSFPEGQYLDKEGISTDEYRKEKQTDHLYTERDCPSDLWVLLGSALSESEKDSLQEFASWTDATVVNEWTENVTHVIVGKSAGSAWSRSYEVLMALLFGKWVVTVGWIMDCLVKFIPSPEASFELRFSHDSRASIGGNKKRRNQASEGAQKLFSGLNFCLSVYINPDDRQHIQSLIAAAGGQILETNGGSHSLRENLEKVAVKPCYFVYDGGAPRVFTQGLLDDLPKEMEEGREYAACGAQVISHLRVFDAIAAYDAQILSHKDHFTPDV</aaseq>

Gene Sequence

<dnaseqindica>1..342#1390..1455#2634..2888#2977..3083#3793..3979#4087..4193#4320..4412#4523..4609#4719..4854#5034..5199#5383..5507#5823..6191#ATGACCACTGCGAGCTTGGCGCACCCTTTAGCGAGCTCGAGCTCGAGCTCTACTCGTGTGGAGGTGGAGGTCATGGGCGATGTTTTTGTCAGCAGCGACGACATCGCACGGAACCTCATCATTGACTATGGCTCCGGCAAGATCGCGCTCACCGCCGCCTGCATCCACTTCCGTATCCCTGGCGCTGCCCTCAACTCCCCCTTCCACCACTGCGTCGCTTCGGTCCTCCCAACAATTGCTTTGCTGTCACTACCACCGAAGAAGAAGCCACTTCCGCCGCTGTCACCGATGGCGGTTGCTAAGAGGAGCCCACAACCCCCTCAGCCTTTCGTGCTTCGGCCAGTGTGGCGGTGTGGCCCCTCCTAGCCAACGGAGGGAGGCGCAAGAAGCAGCCGGCGGCGGTGAGGGCGTGAGGCCTTTTTTTTTTTTTTGAGAAATGCTCGATCCCCTTTCACTTGCGAGATGAAGAAAAGGCAAGCCGGAGGGGTATTTTCGTCAGATCACCACGTGAACAGCAAAAAAACATTTCGGAAATCATGAAAAGGCGAAAATGGCAATGCGACGAGTAGCGCGCGCTCGAGATTAGTATTATATCGAATTACGTTTTAAGGATGACATAATAGCGAAATCCAGTTTTGAAGATAGCTAAACGTTTATTTTCTCATTTTTCAGGGGACGGAAGGCGTAAACAATAAACCTCTACAATAATGCCCAGGATTCGGATCTCATTGGATGTGAGAAGAGAGAGACAGCGAGCAAAGCGAAGTGAACTGACTGTGAAGTGACCGCACTCCGGCTGCATTAACTGCATCGTCTCGGCTAGGCTAGGGCTAAACACGTCCAGAGACCAAAACGAGTCGACTCCTCGTCGTCGTCGACACTCGAGAGGCACCTGCACTACTCCACTCAGCTCACACGCAAAACGTCCGCTTCGTCTCGTCTCCCTCCTCTCAAACCGCCTCGTCTCTCGCGCCCTCCTCCTCTCCTCTCCTCGTCTCGTCTCGCACGCGGGTGGTGCGCGCCACCGCCTCACTCGCTCACTCGCTCGCCGACGCTGCCCGAGGCGGAGGCGGCGGCGGCGGCGGCGAAGAGGCCGTAGCCCGCTTCGCTCGGCGGATCGCGCGCGCGAACCGGGCGGTGGAGGAAGGGGGAGGGGGAGGGAGAGGGGCGGAGAGCGCCATCGCCGACCAGGTGAGCGCTTTGATTCCCCTCCTTTTCCCCCTCTATTTCTGACCCTCCGGCTCGCACGTGTCTCCCCCTCCCACCCACCATCTCCGGTGTGGCCGGCCGGCAGATGGTCGGCGGCGACGACGACGGTAGTGTAGTGCTGCGGGTACCTACGCTTCCCCGAATTTAAATTTTGTAACCTAATTTTGGTGTTGATTTTAGGGTTCTCACCATAGTTTATTTCCAACGGTTTTCCCTGAGGAGAAAGGAGAAGACTTGGAATATACAGTACGTAAAACAAGCTGAACGCCTGAACTAGTACATGATTAATTAGATATTAACTATTTTAAATTTGAAAAATATATTAATATAATTTCTTAAAGCAACTTTTCTATAGTAAATATTTTTCAAACACGCAATGTTTAGCAGCTCGGGAAATGCGCGCGCGAAAAACGAAGGAACCCTTCTCCCTATCTGCCACTCTTACAAAAGAACACAGCAAAACATTTCATTGCTAAGAACAGATATAAAAGTTTTACCCACAAATTATTTTGAGTCTATTCAACACGCTGCATTCATTTCATTAGCTGCATATATATTTGTGTACTATTGCTACAATGATCAACAGAATTAGCAGTGCTATACGTTTTGCCCCCTTTCGAAGTCCAAAATTTGGCACTCTTCTGCCTCCCAGGAACCCCTCCTCGCTTGATTGCTTCGACAACTTTAAGCAGTGATCATTGGAATATAACTCCACTGTGAATGGTGCGAGATGGTTACTAGTTTTTTTGTCAGTAAGAGATGCATGATTACTCCTGTCCTGCCCCTGAATCAGGGTTGCATTGTAACAACGGACATATAAACGCAAATTGAATTTCCTAGTAAAGTGCTAAAGGCAGGGATGTGTTTGCCAATGAATTTTCTTTGCAAATGGTCTAGAGTTTGGATTTTAATAATGCGACGAGTTTTGTAATTCCAACTTGAATTGATCTCGTTTTTACAAACAAGACTATTGAAAAAGTTAGGGATATGCTACTTATGATTTGATTAATCAATTAATCTGGGGGAGCTATTTAAATAATGATGGGACTAATATTGTCCAGCTGCTGCTCTCAGCTTCACCCTACTCTCATGCTGCCTTATAGATCATGAGCACAATGGCTGACAGCGTATTTGGAGAAAGGGACAGCAGTAATTTCGAGATTCTTCAACGAAGTCATATGAACAGCAATTAGTTGACTAGGCAAAGCATCTTTCTGAGTAAATCACGTCTTGTTAGGGTACTTCAGTTGTCTTTCCCAGATCTCTTGTAAAATTCTTTCCCTCAGTCCTGCAGATTTGCATGCTCAAGGACAAGGACCTACACATTATGTGGTGGTTCATGCAAAAAAGAAAAATCAATAGTTTTTCTATAATATCTACACATATACTCAACAGTTTGACTGTATACATTTTTTCTATTATAGAATAAGACAGCATTGGCTGCAGAGGGTTCAAATGAGAAAGCTGCGATAGATGCAAATGAAGTTTCATTGCCTCTTTCTAATCTAAGCAACACTCGACAACATTCTGATAGAGAAAACAACATGCCTGGAAAACATGGCAACGATGGCATGTCAAAAGACATGGGACGTGCTACTAGATTGAAGAGACTGCAAACGCCAATCAACTTATTTGAAGATGAATGCGTTTTCTGCCATTCATTTAGAACACCTCCTCAGGTGAACTATGATCTATTAACCAGAGGTTATGTTTTGAGGTCTTCTTAACCATTTCTGACACTAAAGGTTCTCACTTCTCCTATTTCAGTTTCATGGTCCAATGGCGCATTATCAAAAGGGAAAGCTTGTGTCCAGTGACAATGGCAGTCCATGCCCAACAGATATCATTTATGTTCATAAGAAATGCCTGGAGTGGTAAGTTCCTAAATATATTTCAACTCTTGATGCTTATTCACCACAATTTAGATTTATCATCATGCGCTTCCAATGCAGGTTTAAGATACAAGGATGCTGGACAATTTTTATTTTTATTTGTTGAGATCTGGACCCTTGTATAATTTTTTAGTTTAATACCTTATTGGTTTGCTTTATAAGACAACCATTCCATTTGTTTAATTATGTCCAAATATTAGTCAGTATGATATATAGTTTTAGTGGCATGCAAGAATTACCATTTTGATTCCTATTTCAAAGTAAATTCACATGATATTTTTTTTAGCCATTAAACAGCCTATTCAATGTTTGAGACGTGCTAAGTCTAACCATACCTAATAAAAATAACCAGTGGCTGGAGTGGTATTAAAGTGGGTAGTTGAGGGGTGATGGTGCGTTCTACATCCCCCTCCCTCCGTCCCCCATCATAATTTTGTTGTTTGCATGATATATTCTTCTGCAAAAAGTTGATTTGTTTGCACATGTGTATGTGTAGATGGTTGATTGATCTCATGTAGTAATTTTTCAATTTTCTAGATTTGGAGACAATTCTTATTTTTAGTATATTTAGCTTTACATTATAAACTATATTTACTTCATCCAGTGCAACAGTTGGCACTAGCTAGTTACTCTCAAAGGACTATTTCTTGGGTAAATTGTTTGTCTTTCCCTACTTTTTTCTTTTGCGAAGGGCCCCGCAAGTATTTTACGAAGGTGATACCATTGTGAACTTGGAGTTGGAAATAAAACGTGCCGCGAAATTGAAGTGCAAAAGATGCAAGCTTCCTGGAGCAGCTCTTGGGTGTTATTATACAAAGTGCAATAGGAGCTATCATGTTCCATGTGCAATGATGACTTTGAATTGCCGCTGGGATGTTGTAAGCTCTTGAGAATATTGTGTAATCGATCCTTTTGTTTGTGATATTCGTCACCACTCTAATAGTCTAATGTTCTAAGCTCCGAGATGCTAATTTTCATTTTGCAGGATAACGGTTGTGTTATGTGCCCTGAACATGCAACGATGCCACTACCATGTGATAAGATAAGCTCGCCAAGAAATGAGAGTGGCAATTCTTCTTCCTTCCCTCAGAGGTTTTTCCATGAATAAGAAATTGTTATTCAAGCTTATTGCTTTCTTGGAAGGTTATACAAAGGCTCTGGTATTTGATTAATCATTGATCCTTCATTTGTATTTTTCTCCTTGATTCTGTGTTCCAGCCAATCGTCAATTGAACAAAGCGATTCCGCTGATTGCGAATGGGAATATCCTATAATAGATCAATGGAACACATCAAGTTCTTTGTCTCAAGGGTATATGACCTTTATTCACCTGCCTTTTGAGTTACTTTGTAATCATTTTATGAATTAGCTAATACGGAGTAAATACCTACAACATTCTCTTTTGCCTTTTGTTGCTCCAGACAAAGTTCAGCCAAAGAAGGAATTTCTGCTGTTCCTAAAAGGGAAATAGATCAACTTAACACTTCATGTTCTTCCTTTCCTGAGGGGTACACAATCTTTCCTAACCTTTCTTGTTAGATGTCTTTAAGGTTCCTGATTCTTTGATCAATTGTAGTCTTGCATTCCATAAATTTGTGTTGTATTTAATCATTGCAGCCAATACTTGGACAAAGAAGGAATTTCCACTGACGAATACAGGAAAGAAAAGCAAACAGATCACCTTTACACAGAAAGAGATTGCCCCTCGGATCTGTGGGTTTTGCTTGGTTCAGCTTTAAGTGAATCCGAGAAGGTAGGATAAGTGAGAAGTAGCAAACATTACTCTTTTTTTGTGGTGAACAAGTATACGGACAAACAATGCTGAATCCTACTTCATGGATAATTCAACATAGTGGATGATTTGCTACATTTATGAAGTTAACTCTTCCATTCCAGCTTTTGTGGTAAACATGATTTATGTTTTTCAAGCAGGATTCCTTGCAAGAGTTTGCGTCTTGGACAGATGCAACTGTGGTCAACGAATGGACTGAAAATGTGACCCATGTTATCGTTGGAAAAAGTGCTGGTAGTGCATGGAGCCGATCTTATGAGGTCCTGATGGCTCTACTGTTTGGGAAATGGGTTGTCACGGTTGGATGTCAGTATTGAGCTATCTTCTCTACAGTTCTCTATTTCTTTTAGGACCCCAATTTGAGTATTCTTTCCTTTACGTTTATATTGTTTGATATACCTAAGTATCCCTAAGGCCATTCAAGGTTTATCATAAATCTGCAAAGTATTATCTATTCCTAAGCTGAAGTGCTCCGCCTTGCTCTTTTAGGGATTATGGATTGCTTGGTAAAGTTTATTCCAAGTCCAGAAGCTTCCTTTGAGTTAAGATTTAGCCATGACTCACGTGCATCAATTGGTGGAAACAAGAAAAGAAGAAATCAAGCTTCTGAAGGGGTACATATACATCGCTGGCTATAAGATTAGACTTATTTTATGTAGTGAAAACTATCGTAGGCTGTCACTTGTATAAGCTTAGGAATTTGATTTGCAAATCTTTCCCAGTAATATTTTCTTACAGGCCTAGCTGCAACTGGGTACAACAATGCATAAAAATACTTTTTACATATCGCTGTTCAAAGTCAAGGTGTATATATCTAGTGCATAACTCCATATATTCCACCTGCTTTGTGTTGCAACTTACGACATTTCATTCTTTAGAGCAAATTTTCTGCCGCAACAATCTCCATGATGATAATGCGATGCTTGCAGGCACAGAAGTTGTTCTCGGGACTGAACTTTTGCCTCAGTGTCTACATAAACCCTGACGACAGACAACACATACAGAGCCTGATTGCAGCTGCTGGAGGGCAGATACTGGAGACAAACGGCGGCTCGCATTCGCTGCGCGAAAACCTGGAGAAAGTTGCTGTGAAGCCATGCTACTTCGTCTACGACGGGGGCGCTCCAAGGGTTTTCACCCAAGGATTGCTTGATGATCTCCCTAAGGAGATGGAAGAGGGCAGAGAGTATGCTGCCTGTGGAGCTCAGGTGATCAGCCATTTGAGGGTGTTTGATGCCATTGCGGCTTATGATGCACAGATTCTCAGCCACAAGGATCACTTCACCCCGGATGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017832