Os07g0624100

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0624100| Description = Similar to Transposase (Fragment)| Version = NM_001066860.2 GI:297607641 GeneID:4343958| Length = 3883 bp| Definiti...")
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Gene Name

Os07g0624100

Description

Similar to Transposase (Fragment)

Version

NM_001066860.2 GI:297607641 GeneID:4343958

Length

3883 bp

Definition

Oryza sativa Japonica Group Os07g0624100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26500147..26504029

Sequence Coding Region

26500962..26501012,26501250..26501305,26501386..26503352,26503806..26504020

Expression

GEO Profiles:Os07g0624100

Genome Context

<gbrowseImage1> name=NC_008400:26500147..26504029 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26500147..26504029 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcatttgacttattctttggttcctcttctatgcagttccgtctttcggcggcggatggaggcaccggcgggcggcggctacctacttggtggccaaccggcgaggtgcttcggaggacactccatcggcagcaacggcgagggtttcggaggacacccggccacatcgccaccttcgtccagctgggtttctctccctcgtgagcacagtgaggaaatgcggacacccaacgcattttttggacttggcactaacagtggtgaagatattgagatgggtgatgatgatagtgactctgaacaagttggtcctgtagatgagcatgtgaatccagtaatacaagctttaacaaggaaattcagatatgaggcttggaaagagtttgtgccgatactcattgataatgaagttggtgcaggaaaatgtaagcactgtgatacagagatccgtgcaaagcgtggagcgggaacaagttcattgaggaagcatttgacaagatgcaagaagcgaattagtgctcttaagattgtggggaatcttgactttacacttatgtctcctaatagtgtaaggttaaagaattggagctttgatcctgaagtttctagaaaagagctcatgcgaatgattgtattacatgagttgcccttccagtttgtggagtatgatggatttagaagttttgctgctagtcttaacccctacttcaagattatttcgagaacaactataaggaatgattgcatcgctgcttttaaagagcaaaagttagcaatgaaggacatgttcaagggtgcaaattgtaggttctcattgactgcagatatgtggacttcgaaccaaacaatgggatacatgtgtgtgacatgtcatttcattgacacagattggagagtacagaagaggattataaagttctttggagtaaagacacctcatactggagtgcagatgttcaatgctatgctcagctgcattcaagattggaatatcgcagacaagatattcagtgttactttggataatgcttcagccaatgattcaatggctaagttgttaaagtgcaatttgaaagctaagaaaactataccagcaggagggaagctacttcacaaccgatgtgtagcacatgtcatcaatctcatagccaaagatgggttgaaggttattgattctattgtttgcaacatccgtgaaagtgtgaagtacatggataattccccatctcgcaaagaaaagtttgaggagatcattgcccaagaagggatcacatgtgagttgcatcccactgtggatgtatgtactcattggaactccacatatctaatgctcaatgcagccttccctttcatgagggcttatgcttcattggttgttcaagaaaaaaattacaaatatgcaccatctcctgatcagtgggaaagagcaaccatagtctctggaattttgaaggtgctttatgatgcaactatggtggtgtctggatctttatatccaacatcaaacctttatttccatgagatgtggaaaatcaaattggtcttggacaaggaacgctctaacaatgacactgaagtggcaagtatggttaaaaagatgaaggacaaatttgacaagtattggcttaagtcttacaaatatctgtgtattcctgtcatttttgacccaagattcaaattcaagtttgtggaatttcggcttgggcaagcctttggtgaaaatgctaaagagaggattgacaaagttaagaagagaatgaacatgttgtttaaggagtactctgataaactcaaggatagcaatgctaacccactgcgccaagctgaacatgtgatgtctatctctgaaaatgatcctatggctgattgggttcaacacatctctgaacaattaagtgagcaagttgatactgaattggatatctacctcaaagagaatcctattcaggaatttgggaacaaatttgacattctaaattggtggaagaccaatcgctcaaagtatccaactctcgcttgcatagcacaggatgtggtagcatggcctgcttcaacagttgcatctgagtccgcattcagcacaagatctagagtgatcagcgatttcagatgtagccttacaatggattcagttgaggcgcttatctgcctccaagattggtttcgagcttctgccggtcctaacataaatgtgagctcagtaaatgaaatcaactacagtgataattttgtgaacctggacctggaggattccatggatggacaggatggtggaagcttgtga</cdnaseq>

Protein Sequence

<aaseq>MAHLTYSLVPLLCSSVFRRRMEAPAGGGYLLGGQPARCFGGHSI GSNGEGFGGHPATSPPSSSWVSLPREHSEEMRTPNAFFGLGTNSGEDIEMGDDDSDSE QVGPVDEHVNPVIQALTRKFRYEAWKEFVPILIDNEVGAGKCKHCDTEIRAKRGAGTS SLRKHLTRCKKRISALKIVGNLDFTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELP FQFVEYDGFRSFAASLNPYFKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTA DMWTSNQTMGYMCVTCHFIDTDWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIA DKIFSVTLDNASANDSMAKLLKCNLKAKKTIPAGGKLLHNRCVAHVINLIAKDGLKVI DSIVCNIRESVKYMDNSPSRKEKFEEIIAQEGITCELHPTVDVCTHWNSTYLMLNAAF PFMRAYASLVVQEKNYKYAPSPDQWERATIVSGILKVLYDATMVVSGSLYPTSNLYFH EMWKIKLVLDKERSNNDTEVASMVKKMKDKFDKYWLKSYKYLCIPVIFDPRFKFKFVE FRLGQAFGENAKERIDKVKKRMNMLFKEYSDKLKDSNANPLRQAEHVMSISENDPMAD WVQHISEQLSEQVDTELDIYLKENPIQEFGNKFDILNWWKTNRSKYPTLACIAQDVVA WPASTVASESAFSTRSRVISDFRCSLTMDSVEALICLQDWFRASAGPNINVSSVNEIN YSDNFVNLDLEDSMDGQDGGSL</aaseq>

Gene Sequence

<dnaseqindica>3018..3068#2725..2780#678..2644#10..224#ggcgcttacatggctcatttgacttattctttggttcctcttctatgcagttccgtctttcggcggcggatggaggcaccggcgggcggcggctacctacttggtggccaaccggcgaggtgcttcggaggacactccatcggcagcaacggcgagggtttcggaggacacccggccacatcgccaccttcgtccagctgggtttctctccctcgtgagcacaggtatgatttcctccatgaaccctgtcttgttcatctgtcttgctcggttttggtttgatttgtatatatagtgtctcattcaggaaaaagtttcagtgactgttatagctaggctttcatgccattttgctaggcccagatttgtatgccaggagaaagtttaattttgttttcatgccattcaggagaaagtttcagttactgctaatttaaagtttcctactgccttgcgtaaaatagatggtcttttactttgtctttgtataacctggattttctcaatattcaggatatactgaacgaaacactgaataagtagcatttttgcatgctgctgacaacatgctgttgtgtagatttttacaccaaaatttcctttccatacattatgtgatagaaaattattttagatggcaaatgatacatttgtgttgttcgttgctttgtttcaagtgaggaaatgcggacacccaacgcattttttggacttggcactaacagtggtgaagatattgagatgggtgatgatgatagtgactctgaacaagttggtcctgtagatgagcatgtgaatccagtaatacaagctttaacaaggaaattcagatatgaggcttggaaagagtttgtgccgatactcattgataatgaagttggtgcaggaaaatgtaagcactgtgatacagagatccgtgcaaagcgtggagcgggaacaagttcattgaggaagcatttgacaagatgcaagaagcgaattagtgctcttaagattgtggggaatcttgactttacacttatgtctcctaatagtgtaaggttaaagaattggagctttgatcctgaagtttctagaaaagagctcatgcgaatgattgtattacatgagttgcccttccagtttgtggagtatgatggatttagaagttttgctgctagtcttaacccctacttcaagattatttcgagaacaactataaggaatgattgcatcgctgcttttaaagagcaaaagttagcaatgaaggacatgttcaagggtgcaaattgtaggttctcattgactgcagatatgtggacttcgaaccaaacaatgggatacatgtgtgtgacatgtcatttcattgacacagattggagagtacagaagaggattataaagttctttggagtaaagacacctcatactggagtgcagatgttcaatgctatgctcagctgcattcaagattggaatatcgcagacaagatattcagtgttactttggataatgcttcagccaatgattcaatggctaagttgttaaagtgcaatttgaaagctaagaaaactataccagcaggagggaagctacttcacaaccgatgtgtagcacatgtcatcaatctcatagccaaagatgggttgaaggttattgattctattgtttgcaacatccgtgaaagtgtgaagtacatggataattccccatctcgcaaagaaaagtttgaggagatcattgcccaagaagggatcacatgtgagttgcatcccactgtggatgtatgtactcattggaactccacatatctaatgctcaatgcagccttccctttcatgagggcttatgcttcattggttgttcaagaaaaaaattacaaatatgcaccatctcctgatcagtgggaaagagcaaccatagtctctggaattttgaaggtgctttatgatgcaactatggtggtgtctggatctttatatccaacatcaaacctttatttccatgagatgtggaaaatcaaattggtcttggacaaggaacgctctaacaatgacactgaagtggcaagtatggttaaaaagatgaaggacaaatttgacaagtattggcttaagtcttacaaatatctgtgtattcctgtcatttttgacccaagattcaaattcaagtttgtggaatttcggcttgggcaagcctttggtgaaaatgctaaagagaggattgacaaagttaagaagagaatgaacatgttgtttaaggagtactctgataaactcaaggatagcaatgctaacccactgcgccaagctgaacatgtgatgtctatctctgaaaatgatcctatggctgattgggttcaacacatctctgaacaattaagtgagcaagttgatactgaattggatatctacctcaaagagaatcctattcaggaatttgggaacaaatttgacattctaaattggtggaagaccaatcgctcaaagtatccaactctcgcttgcatagcacaggatgtggtagcatggcctgcttcaacagttgcatctgagtccgcattcagcacaagatctagagtgatcagcgatttcagatgtagccttacaatggattcagttgaggcgcttatctgcctccaagattggtttcgagcttctgccggtatacacgactaccctcgttcatttacttctagtatttatcttgctaaaactaatttatttttatgttttgattgctaggtcctaacataaatgtgagctcagtaaatgaaatcaactacagtgataattttgtggttagtaaattgcttgtgctcttcttatcatctgtctatttaattttctgaaagagaaaaatgtctatttattcagtatttgcttgattgcttgcaagatctcttccagcttttctctttctatttatccagtattgagcaatgcctatatgggtttgctgtcctacttgctagctttctgtaaaattggaatatgaagtttcaatgtctctatcatgtattcatctttatctatagaacctggacctggaggattccatggatggacaggatggtggaagcttgtgaatgcccaaacaaagggtctggatattgatggttagtaatctatcatgaacttgtattatactatttataatctgagctagttcaactcttttacaacatatgagaagctctagatgtacaaaaggaataagcctcatttctggtattgcaatgctctgctttctgaaataaaacaatagcctaaaaatagactgtactacactactgctagataaatgaagaaaattagtaaaatctgcaaatttgtgtagcacctgttagatgattcttgtattccttaatctctgattgtgaatactattgggtgactgcatattacttctgtttttcaagcatgttttatatgtcaaatactcaaatgcttagaacacctactgccttgattcctctgtctgtctgcatatgctcatgtcttgattcagttgttgcccataaaacataaatgcaccatttctttttctgagagatattgcaggttattacctttttaaaaaaattattgtatattttcttcctgtcattataccatgatcattcgatctctccatcatgttaacctgcagaatctggacctgggtgattcaatgaacagtgcaagctagggaatgccaaatgatgcccactttgatcttggaaggctgcattttgtttgatctcaatgtaatgaacctgatatttgggttgttcaaatcgatttttgtgaatgatatgagtacatgcatgtacttagttttaattgaactgggtgccagtacccagtgattgatgtttgtacttttgaatgcaaaagattaagtcatttcggaatgtttgca</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0624100, RefSeq:Os07g0624100