Os07g0626500

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0626500| Description = Protein kinase-like domain containing protein| Version = NM_001066872.1 GI:115473476 GeneID:4343970| Length = 4582 b...")
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Gene Name

Os07g0626500

Description

Protein kinase-like domain containing protein

Version

NM_001066872.1 GI:115473476 GeneID:4343970

Length

4582 bp

Definition

Oryza sativa Japonica Group Os07g0626500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26606138..26610719

Sequence Coding Region

26606292..26606872,26607079..26608749,26609555..26610482

Expression

GEO Profiles:Os07g0626500

Genome Context

<gbrowseImage1> name=NC_008400:26606138..26610719 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26606138..26610719 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgctcctcgtgctggtggttttggtggtgttgggaggcggcggcgcggcgggcgacgacgtggcggcgctgctggagttcaagaaggggatttcggacagggggagggaccccgtgctgggatcctggtcgccgccggcgacgcccgacgccggcgggggaggcggcgggtgcccgtctgggtggagaggggtcgtgtgcgacggcggcgcggtggtcggcgtcgcgctcgacgggctcggcctcgccggggagctcaagctggtgacgctctccggcatgcgcgcgctccagaacctgtccctcgccgggaacgcgttctccggccgcctcccccccggcatcggctacctctcctcgctccgccacctcgacctctccgggaaccgcttctacggccccatccccggccgcctcgccgacctctccggcctcgtccacctcaacctctcccacaacaacttctcctcgggcttccccaccgacgggatccggcagctgcagaacctccgccgcatcgacctccgcagcaactccttctggggcaatgccggcgatctgctcgccgagctccgcaacgccgagtacattgacctcagcgacaacctcttcaccggcgccgtcgatttggagctcgagagcttgtccagcatcgggaacaccgtcaagtacctcaacctcagccacaacaagctgcagggcgggttcttccggaacgagacggtgggggccttcaagaacctggaggttcttgatttgagcaacagtgggattgctgggatggtgccgcagatcgacgcgtggttctctctggcggttttcagggtcgccggcaatgcgctttccggtgtgatgccggaggcgatgctgcagaactcgatgcggcttgtcgaggttgatctcagcaggaatggcttctcaggatcggttccagttgtgaactcgacgactttgaagctgctgaatctctcttcaaatacgttctcaggttccttaccatccactgttggcaagtgtagctcagttgatctgagtgggaaccagctttctggggagctagctatattgcgtgcttgggatggtaccgtggagacgattgacttgagttcaaacaaactggagggaagctacccaaatgatgcttcacagtttcagaacttagtctccctgaagctgcggaacaatttgttatcaggatctattccttccgtgttgggaacctatcagaagttacaattcctcgatctcagtctaaatgctcttggcggacctgttttgcctttcttctttctgtcgcccactttgacagtgttaaatctttccggaaacaacttcactgggactattccatttcagagcacacattcaacagagtcgattgcactaattcagcctgttctcaggatcgttgatctgtcaagtaattctttgtccggtccgttgccaccagatatttctaacttgcaaagagttgagttccttactctcgcaatgaatgagttgtctggggagattccaagtgagataagcaaacttcaaggattggagtatcttgatctatcacataatcactttactggcagaattcctgatatgccccaggctagtttgaagatattcaatgtgtcctacaatgatctacaaggaactgttcctaaaagtgttgaaaaattccccataacctgctttagacctggaaatgacctattagtttttccagatggccttcctgctggaaattatgatgatactggagtcgctcagagtcaatcgtctcatggacataaggctggcgttcgagttgctcttattgttggctgcattggagctgcattgcttgtgatcttcatagcattggcaatctatgtggtcaggtctcaagagctttgcggaagaaatggatttagaggtcagattactattagagatctaaaactggggaggttaagccgaccaaatcttttcaagcctccgaaagataatgttataccaactaaaacaagtttctcaaatgaccatctcttaacagctgcagctagatcaatgtctgctcagaaagagctattagctgaagctgctgttgagtacggctatgctgatccaaaagaagtcactgaaccctcgagttcaggtatggctgagacctctgctgcagtccctgctatggagccctctccacgggttgtgctaccaacatcaccacattttattgatagtagattccatgaggaacctgtggcatttgaagtgtactcacccgatcggttggtcggagaattgattttcctagacagcactttggttttcacagctgaagacctgtcccgagcaccagcagaggttcttggaaggagcagtcatggcacgacatacaaagctgcactacaaagcggccatgtcctgacagtgaagtggctgcgtgttggcctcgtaaagcataaaaaggacttcactaaggagataaagaggattgggaccatcaggcatccaaatataatttcgtggagagctttctactggggtcctaaggagcaagaaagactcattatttctgactacgtcaatggcgacagcttggctctttatctttatgagtcaactccaagaagatactcccgcttgtcagtttctcaacggctcaaaattgccatcgacctggcacgctgcctccagttcttgcaccatgagaagggtctgcctcatggcaacctaaagccaaccaatatattcttgacgggtcctgatctctccccgaagctagtcgattatggcctgcatcggttcatgactccaagtggcactgctgagcaaatacttaacttaggggcattggggtacagagccccagaactggcaaacacagccaagccaatgccatcatttaaagctgacgtttacgcgtttggggtgattgttatggagatgttgacgcggaagagtgccggggacataatttcgggtcaatctggggccgttgatctgaccgactgggttcaaatgtgcaacagggaaggacggggaactgattgtttcgatcgagacatcacgggcttggaagaatctccaagggtgatggacgagctgcttgcgatctctcttaggtgtattcttcctgtaaatgagaggcctaacatgaagacggtctgtgacgatctgtgttccataaccgtgtga</cdnaseq>

Protein Sequence

<aaseq>MAALLVLVVLVVLGGGGAAGDDVAALLEFKKGISDRGRDPVLGS WSPPATPDAGGGGGGCPSGWRGVVCDGGAVVGVALDGLGLAGELKLVTLSGMRALQNL SLAGNAFSGRLPPGIGYLSSLRHLDLSGNRFYGPIPGRLADLSGLVHLNLSHNNFSSG FPTDGIRQLQNLRRIDLRSNSFWGNAGDLLAELRNAEYIDLSDNLFTGAVDLELESLS SIGNTVKYLNLSHNKLQGGFFRNETVGAFKNLEVLDLSNSGIAGMVPQIDAWFSLAVF RVAGNALSGVMPEAMLQNSMRLVEVDLSRNGFSGSVPVVNSTTLKLLNLSSNTFSGSL PSTVGKCSSVDLSGNQLSGELAILRAWDGTVETIDLSSNKLEGSYPNDASQFQNLVSL KLRNNLLSGSIPSVLGTYQKLQFLDLSLNALGGPVLPFFFLSPTLTVLNLSGNNFTGT IPFQSTHSTESIALIQPVLRIVDLSSNSLSGPLPPDISNLQRVEFLTLAMNELSGEIP SEISKLQGLEYLDLSHNHFTGRIPDMPQASLKIFNVSYNDLQGTVPKSVEKFPITCFR PGNDLLVFPDGLPAGNYDDTGVAQSQSSHGHKAGVRVALIVGCIGAALLVIFIALAIY VVRSQELCGRNGFRGQITIRDLKLGRLSRPNLFKPPKDNVIPTKTSFSNDHLLTAAAR SMSAQKELLAEAAVEYGYADPKEVTEPSSSGMAETSAAVPAMEPSPRVVLPTSPHFID SRFHEEPVAFEVYSPDRLVGELIFLDSTLVFTAEDLSRAPAEVLGRSSHGTTYKAALQ SGHVLTVKWLRVGLVKHKKDFTKEIKRIGTIRHPNIISWRAFYWGPKEQERLIISDYV NGDSLALYLYESTPRRYSRLSVSQRLKIAIDLARCLQFLHHEKGLPHGNLKPTNIFLT GPDLSPKLVDYGLHRFMTPSGTAEQILNLGALGYRAPELANTAKPMPSFKADVYAFGV IVMEMLTRKSAGDIISGQSGAVDLTDWVQMCNREGRGTDCFDRDITGLEESPRVMDEL LAISLRCILPVNERPNMKTVCDDLCSITV</aaseq>

Gene Sequence

<dnaseqindica>3848..4428#1971..3641#238..1165#actggcatacactactctctctctctctctctctctcttccccagctggtgcttgctattattacactccacccctcgcatttccaaaaatttgcatttctttctctcacacatctcttccccttctctctctctcagctaagcttctcacccccctccaatggcagccgccgccgccgccgccaccacctgctcccacgccgaaacctagctgtggccacccccgcacccgcatccatggccgcgctcctcgtgctggtggttttggtggtgttgggaggcggcggcgcggcgggcgacgacgtggcggcgctgctggagttcaagaaggggatttcggacagggggagggaccccgtgctgggatcctggtcgccgccggcgacgcccgacgccggcgggggaggcggcgggtgcccgtctgggtggagaggggtcgtgtgcgacggcggcgcggtggtcggcgtcgcgctcgacgggctcggcctcgccggggagctcaagctggtgacgctctccggcatgcgcgcgctccagaacctgtccctcgccgggaacgcgttctccggccgcctcccccccggcatcggctacctctcctcgctccgccacctcgacctctccgggaaccgcttctacggccccatccccggccgcctcgccgacctctccggcctcgtccacctcaacctctcccacaacaacttctcctcgggcttccccaccgacgggatccggcagctgcagaacctccgccgcatcgacctccgcagcaactccttctggggcaatgccggcgatctgctcgccgagctccgcaacgccgagtacattgacctcagcgacaacctcttcaccggcgccgtcgatttggagctcgagagcttgtccagcatcgggaacaccgtcaagtacctcaacctcagccacaacaagctgcagggcgggttcttccggaacgagacggtgggggccttcaagaacctggaggttcttgatttgagcaacagtgggattgctgggatggtgccgcagatcgacgcgtggttctctctggcggttttcagggtcgccggcaatgcgctttccggtgtgatgccggaggcgatgctgcagaactcgatgcggcttgtcgaggttgatctcagcaggaatggcttctcaggtatatatcttccttttgctagtcaaatggttctgctatctttgtcaaaaatgccttgatctgtcactaggaaccccccagcgtaagctgaagtggttgattttgttcttgtgattgattgttgttgtgcttggacgcgttggcaaatgtggagtggcgatgcctaaattacaacctgcgaatcaaatgagattcgtaacatttgcgacacgaatatttctagacttcgttggcaaaaatatattcaatgcatcttgaatctggttgagttcatttgcattgaggatttgatgagcatatggaacaattgactcttcttgcatagttgtctcttgtgactcgtggtgaagctgcattgttggcttataactgattttagcatctttctttgtaattcatgtttgttgcttctgtaatagtttgtataaacgatagttatttatttatagacctaaacatagtcttaagtagttaacatttttggtgctcattgataaactcagtcaaataaaccttttattctgaaccagctgtcatgttgccacatatttcttctaccatagaacttgctgatggatccttgccatctaacatgacttttacacagaaattattcaattaagactgtaacaaactattcctatgctaatatgctatggcatgagatctactattgaaaaatatatgtatctgtttatagtttgctgccttgctatgtctactctcttcttgtacagttattcataaatgtcattttcatttgtctacagctctaaatgattcgtgcacgcttgtaattttgcaggatcggttccagttgtgaactcgacgactttgaagctgctgaatctctcttcaaatacgttctcaggttccttaccatccactgttggcaagtgtagctcagttgatctgagtgggaaccagctttctggggagctagctatattgcgtgcttgggatggtaccgtggagacgattgacttgagttcaaacaaactggagggaagctacccaaatgatgcttcacagtttcagaacttagtctccctgaagctgcggaacaatttgttatcaggatctattccttccgtgttgggaacctatcagaagttacaattcctcgatctcagtctaaatgctcttggcggacctgttttgcctttcttctttctgtcgcccactttgacagtgttaaatctttccggaaacaacttcactgggactattccatttcagagcacacattcaacagagtcgattgcactaattcagcctgttctcaggatcgttgatctgtcaagtaattctttgtccggtccgttgccaccagatatttctaacttgcaaagagttgagttccttactctcgcaatgaatgagttgtctggggagattccaagtgagataagcaaacttcaaggattggagtatcttgatctatcacataatcactttactggcagaattcctgatatgccccaggctagtttgaagatattcaatgtgtcctacaatgatctacaaggaactgttcctaaaagtgttgaaaaattccccataacctgctttagacctggaaatgacctattagtttttccagatggccttcctgctggaaattatgatgatactggagtcgctcagagtcaatcgtctcatggacataaggctggcgttcgagttgctcttattgttggctgcattggagctgcattgcttgtgatcttcatagcattggcaatctatgtggtcaggtctcaagagctttgcggaagaaatggatttagaggtcagattactattagagatctaaaactggggaggttaagccgaccaaatcttttcaagcctccgaaagataatgttataccaactaaaacaagtttctcaaatgaccatctcttaacagctgcagctagatcaatgtctgctcagaaagagctattagctgaagctgctgttgagtacggctatgctgatccaaaagaagtcactgaaccctcgagttcaggtatggctgagacctctgctgcagtccctgctatggagccctctccacgggttgtgctaccaacatcaccacattttattgatagtagattccatgaggaacctgtggcatttgaagtgtactcacccgatcggttggtcggagaattgattttcctagacagcactttggttttcacagctgaagacctgtcccgagcaccagcagaggttcttggaaggagcagtcatggcacgacatacaaagctgcactacaaagcggccatgtcctgacagtgaagtggctgcgtgttggcctcgtaaagcataaaaaggacttcactaaggagataaagaggattgggaccatcaggcatccaaatataatttcgtggagagctttctactggggtcctaaggagcaagaaagactcattatttctgactacgtcaatggcgacagcttggctctttatctttatggtaactatcccatgctcacttgaatcggcaatggattttttccttgtttggttgacatgcattcctaatttacaatggaatacctaatatttacattgtctgcttgattattactatcttatttgttccatatatttgctgggtcattcatgtcaacatttgtttcttccattgctgaaattttgatctcctcgcatgtgctgcagagtcaactccaagaagatactcccgcttgtcagtttctcaacggctcaaaattgccatcgacctggcacgctgcctccagttcttgcaccatgagaagggtctgcctcatggcaacctaaagccaaccaatatattcttgacgggtcctgatctctccccgaagctagtcgattatggcctgcatcggttcatgactccaagtggcactgctgagcaaatacttaacttaggggcattggggtacagagccccagaactggcaaacacagccaagccaatgccatcatttaaagctgacgtttacgcgtttggggtgattgttatggagatgttgacgcggaagagtgccggggacataatttcgggtcaatctggggccgttgatctgaccgactgggttcaaatgtgcaacagggaaggacggggaactgattgtttcgatcgagacatcacgggcttggaagaatctccaagggtgatggacgagctgcttgcgatctctcttaggtgtattcttcctgtaaatgagaggcctaacatgaagacggtctgtgacgatctgtgttccataaccgtgtgagtttcgttttaatttcccgtgtacatgtaaccgatttttcgttcatcccaattttttctgtgggttttccagagccttgtagccagggtttgtttggttggtaactcgagtagtgtaaagaggatttgatcccatccatcccattgattgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0626500, RefSeq:Os07g0626500