Os07g0626600

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0626600| Description = Similar to Embryogenic callus protein-like| Version = NM_001066873.1 GI:115473478 GeneID:4343971| Length = 4589 bp| ...")
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Gene Name

Os07g0626600

Description

Similar to Embryogenic callus protein-like

Version

NM_001066873.1 GI:115473478 GeneID:4343971

Length

4589 bp

Definition

Oryza sativa Japonica Group Os07g0626600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26619212..26623800

Sequence Coding Region

26619212..26619415,26620762..26620904,26621010..26621103,26621263..26621424,26621621..26621689
,26622368..26622580,26622791..26622850,26623031..26623119,26623482..26623800

Expression

GEO Profiles:Os07g0626600

Genome Context

<gbrowseImage1> name=NC_008400:26619212..26623800 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26619212..26623800 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctcgatggaggcgtccaccgcgccggagaacggcaccgccgccgccgcggcggccgcggcctcgacggcgtgcaacggcgcgggcggcggcggcggcgccgccgccgcctcgaacggcggcggggtagagaggaggctgaggtcctccgccgcgtccgcgtcgtgggcgtcgcatctgccgctggaggtgggcacgcgcgtgatgtgccggtggcgcgaccagaagctccatcccgtcaaggtcatcgagcgccggaagtcctccacctcctcctcccccgccgattacgagtactacgtccactacaccgagttcaataggaggctcgatgagtgggttaaacttgaacaacttgatcttgagactgttgagaccgatgttgatgagaaggtagaagataaggcaacaagcttgaagatgacacggcaccagaagcgtaaaattgatgaaacccatgtggagcaaggtcatgaggagcttgatgctgctagtttgcgggaacatgaagagttcacaaaggtgaaaaatatagcgaagatagaacttgggagatatgagatagatacatggtatttctctcctttcccaccggagtataatgactctccaaagctgttcttctgtgagttttgcctcaacttcatgaagcgcaaggaacagcttcagaggcacatgaaaaaatgtgatcttaaacatccccctggtgatgaaatatacagaagtggaaccctgtctatgtttgaggttgatggcaagaagaacaaagtttatgggcagaacctttgttatcttgccaaactatttcttgatcacaagacactttattacgatgttgatttgtttttgttctacgtcctgtgtgaatgtgatgatcgggggtgtcatatggtggggtatttctccaaggagaaacactctgaggaatcttacaatttggcttgcatcctcactctccctccatatcaaagaaaaggatatgggaagttcctgattgccttctcctatgagctttctaagaaggaaggtaaagtagggacaccggagcgccctctttctgatcttggtctgctcagttatagaggttattggactagagtgcttctagagattttaaagaaacataagagcaacatatccattaaggagcttagcgatatgacggcaataaaagcggacgacatcttgagcacgcttcagagtctggacctgatccagtaccggaaaggtcagcacgtcatctgcgctgaccccaaggttctcgaccgccacctcaaggccgccggccggggtggcctcgaggtcgacgttagcaagctgatctggacaccctacaaggaacaaggctaa</cdnaseq>

Protein Sequence

<aaseq>MGSMEASTAPENGTAAAAAAAASTACNGAGGGGGAAAASNGGGV ERRLRSSAASASWASHLPLEVGTRVMCRWRDQKLHPVKVIERRKSSTSSSPADYEYYV HYTEFNRRLDEWVKLEQLDLETVETDVDEKVEDKATSLKMTRHQKRKIDETHVEQGHE ELDAASLREHEEFTKVKNIAKIELGRYEIDTWYFSPFPPEYNDSPKLFFCEFCLNFMK RKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTL YYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIA FSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLEILKKHKSNISIKELSDMTAIK ADDILSTLQSLDLIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG </aaseq>

Gene Sequence

<dnaseqindica>4386..4589#2897..3039#2698..2791#2377..2538#2112..2180#1221..1433#951..1010#682..770#1..319#atgggctcgatggaggcgtccaccgcgccggagaacggcaccgccgccgccgcggcggccgcggcctcgacggcgtgcaacggcgcgggcggcggcggcggcgccgccgccgcctcgaacggcggcggggtagagaggaggctgaggtcctccgccgcgtccgcgtcgtgggcgtcgcatctgccgctggaggtgggcacgcgcgtgatgtgccggtggcgcgaccagaagctccatcccgtcaaggtcatcgagcgccggaagtcctccacctcctcctcccccgccgattacgagtactacgtccactacaccgagtgtaagcgacctcgcccccaacaggatgcttcgtttctagggttaggtttagggtgcttcagattgagggaatctggggcttaaatggtcaattagtttaggggttatgaaattcgaggtgatatagtgatgaatttgtatatgggaatataggattgcttttcgctggggccggaaatggccgttctagtctcgtgtctcaatagtttcagtacaatcacaaacttttacccgatttcgttagctgaaataggagttagtgcttcataacagctgcagcgtattctgttgtgggtttgtggagttctgtcatgttgacatatttatgcttaccaatcgtatttaaatgtaatgaacttgcagtcaataggaggctcgatgagtgggttaaacttgaacaacttgatcttgagactgttgagaccgatgttgatgagaaggtagaagataaggtaacataaattcatgttgttcaattgtcaatcataccagtagaatttgctttttccttatattggccgctatactgtccaggtgacggttgaaaacctgagatgatcatcctaagacataaatagccctctgttatttcaaaagaatactcatacaactccattttaatatgtactcaggcaacaagcttgaagatgacacggcaccagaagcgtaaaattgatgaaacccatgtggaggtatggaatagattgtatcactgtggataatttgattatcatttgttcttgaagatttattatctgtaaggatgttagtttgctatgcaatggctacaaaaattgatgaaacacatgttggttccttcttcacgttgtactgtaattgtggtttcccttttgaattagtatcctgaaactaatctagctttgtgtccatttccattatagcaaggtcatgaggagcttgatgctgctagtttgcgggaacatgaagagttcacaaaggtgaaaaatatagcgaagatagaacttgggagatatgagatagatacatggtatttctctcctttcccaccggagtataatgactctccaaagctgttcttctgtgagttttgcctcaacttcatgaagcgcaaggaacagcttcagaggcacatggtgagatttagttatttgttcccatatggagggttactatcttttcagccaggctctgctaatgcaaatttgggagtatgagctcaaatctgcctgcacttgtttagctcctcctgtgctttttcggcccatctatcttaactttttgttcattgtaccattaggtgccaaacatgttctcttaatctttatttttttaaaaggccctgtttgtattgcaggaatttcctcataaagctgcagtaattatactgtttactgtgaattttgtgggttctaaaaaatgcctgttttgccattctagtggtccctagctctgaattgattgcaactgttgtgtgtcgccagccatttaataattagtacaacgaacttcataagtaaaatgcaacccctctgccccactacttatgtttctggcatctcagaaaaatctccttaaatgtcctcaagtcatggctggtacttattgacattacaaataccataaatcagatcaacctcgctgcatgtgcagcatattccgttcctgagttgatcacttgatctatgatcatctttgaatgcattttatatcttgtttgttgtgcacatgtttcatttatagcgttctgatattccatgttaaattatcataagtcataatcaatgattaattccattctctttactatacagaaaaaatgtgatcttaaacatccccctggtgatgaaatatacagaagtggaaccctgtctatgtttgaggttagttcgatatccattttagcttcctgtaatggcagcttgcatgctatgttgatcaagtttctgaaaccagttctctgctgttggcataatgccttaaaaagttttaagaaaagcagaatggaaatcatgcaacttctccttttcatttagttatcttaatattttaataagaaaaatgtttgcataattgcaggttgatggcaagaagaacaaagtttatgggcagaacctttgttatcttgccaaactatttcttgatcacaagacactttattacgatgttgatttgtttttgttctacgtcctgtgtgaatgtgatgatcgggggtgtcatatggtggggtatttctccaaggtaaagttcacaatgcttctctgtaatgaatattacttatttctttgttttaatgaactgaaatttatatttgtggcgctgtttctgtttgcaagatgtatttcttattagtagtagtgaatcatttgatgtttcatattggttgttatcattatccaggagaaacactctgaggaatcttacaatttggcttgcatcctcactctccctccatatcaaagaaaaggatatgggaagttcctgattgccttctgtaagatcttatgctctgtattatgcctgataaaatttagttcccatgcacaccgaatcataactgtatcgtagcattttgttcaagatttttttttaattgcagcctatgagctttctaagaaggaaggtaaagtagggacaccggagcgccctctttctgatcttggtctgctcagttatagaggttattggactagagtgcttctagagattttaaagaaacataagagcaacatatccattaaggtaatcaccacattccttctcctctatctaacactatagtttttttctctctccattttatcatttgaataaatcatgataaaaacaggcgtcattttcttttttggcattgcatcaaatactacttttttttatccctatctgatcctgttcattgatgatctcagccaatctattacttacaatcatatgtaggataaagtgtcatcaggttaatttctagtgtgtaaatggtcagattaatataggctaaaatggtcaggtcaggagtagccagttgagtgaacagtaagatcatgcttgcccacacaaggacattggtttgcatattaataggcttttcaccttacatcttcctgttcgtttgccctggggcctgaaaacttttggattatgtgaaacagaccatttgatgctacacttcacagtttggatgtttgtggatatccatgagatcttgattaccaactcaaatctaatgtgctacttttcatggatacagtagatatgtgcagttcagtagtctgaagggaggctgtagattcttacacccagtttacttcttacaaattacaataaaatattaaatccaacaaaccaagctgaaattcatgtgtcatcagtcaatatttgtccacatctaaataatcattcatgtagatatagcccactgcagtttcatggacagctataataactaataaaaatcttcactcaacttacttctggcattagaaccattgttctagctcttaaagattgcatgaaagaataaatcaacaattagattctccaagctgcattatatccttaaaccattctgaagaagaggtgtatatccttttcttttgaactcaaatatatgtagacaggatcacatgcaactagtgtaatctgcagaaacttcctctacggaaggacatatatccatgtgttctctggcttgtcagcctgtgccttcctgttcatcttgccccggccctctaaaacttttggatgtatgcaaatcaaaccttttgacgacacacaagaacaattggattctgaaagataattgttcctgcatccttgctccctgatgcactagtacagtcactggtgcaaacagatctgtaggaaaagtcaataggctgtgttgtactaactactgtataattttactttccatactaattttttttttcaaatcatgaagaaacacacacattgagttcctctgtagctgaatccatagcccataactccaccacagatccatcattttctatcatcaattagcttcgatttgcattatccaattacgcagccctaaactgttcctaacaggttgtcgcgcttgaatgcaggagcttagcgatatgacggcaataaaagcggacgacatcttgagcacgcttcagagtctggacctgatccagtaccggaaaggtcagcacgtcatctgcgctgaccccaaggttctcgaccgccacctcaaggccgccggccggggtggcctcgaggtcgacgttagcaagctgatctggacaccctacaaggaacaaggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0626600, RefSeq:Os07g0626600