Os09g0479100

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0479100| Description = Cyclin-like F-box domain containing protein| Version = NM_001070011.1 GI:115479764 GeneID:4347377| Length = 3602 bp|...")
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Gene Name

Os09g0479100

Description

Cyclin-like F-box domain containing protein

Version

NM_001070011.1 GI:115479764 GeneID:4347377

Length

3602 bp

Definition

Oryza sativa Japonica Group Os09g0479100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19018303..19021904

Sequence Coding Region

19019057..19020319,19020412..19020471,19020594..19020686,19021037..19021093,19021683..19021721

Expression

GEO Profiles:Os09g0479100

Genome Context

<gbrowseImage1> name=NC_008402:19018303..19021904 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19018303..19021904 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttctaagaaagccttggcaatgcagccaagcaagaaaatttgcatgaccttgttgccgcaagacattgttgaactgatacttctgaggcttccggtaagcactctgctgaggtgccgtggtgtctgcaagcaatgggatggcattattcgggatcctcagtttgccatggtgcacatccagcgtgcgccgcgtcgccccctatttttctttcaacgagagaatttagtccatctcctctaccctagtgaagcaatcctctttgatgaagcatggtcaccatcaaaatgggttgtacctgtgatcgagcctgatgattttttatgtgcttcatgcaatggacttatttgtttacactcggataaatcaacaatcaagatagccaaccttgcaactggtgaatgtatgcatctagtaaaacctgtcaggaactcaaagactgatcacttctcttattacagctttgggtttcacccagtgacaaaacaatacaaggtaatgcactttcttcgtgacgagcacctccatgttggtactagcttcagcataattcaagtttacacactcggtgatgagaaatggagagatgttagaactccacaggctttaagcttgagatgtgtggaaagatctggagttgtcaatgttggtggggcaatgtattggctgactgaagatgaggaaagtgtttggaaacatgcagttgtgacctttgatctcagtgaagaacttttccagtggttacagctcccagcagttgatcctgcaaactatgtgcttggtgatcctgaccagtggctgattacagaggttgatagcaatgtgtctgtaagctattacgagacagggaagctgcatatctggacaattgacagcaagatagagcaaagctggagtcagaagtacaacattcgcttatcaatgcttgaagttccaggaccacattggatctgcggtgataagattatcttgcatgattttaataagaacctatatttctatgagttgatggggaagaattctgagattgagtcgagcaagttagtgaagcaattgagattcagcccccgcaacaacatgcaatgctttatgtttgtgaagtcgcttgtacggttggatgcattcagaaaggctggtgttgtgcgtaggccaaagcgacaggagggttggaaattgaagaagtgggaagtgtggatggataggctccatcgactagagaatcattgcagaagtatccatgatatgaaacacaagatttatgaaaatgcagataaaatgggcatggagatcaaactagatttgcagcagacaccagatttggatagttccctgcggctgatcaactggttggagtataggcgggtactagagatattgtgtgttaatctcgacaacatgcatgaagtattaacggtcatgaacaacacaactggtgctgcccataataaggaaagccatgtggcagatcagggtacttcgagttcagctgttggcatatctggctcatga</cdnaseq>

Protein Sequence

<aaseq>MASKKALAMQPSKKICMTLLPQDIVELILLRLPVSTLLRCRGVC KQWDGIIRDPQFAMVHIQRAPRRPLFFFQRENLVHLLYPSEAILFDEAWSPSKWVVPV IEPDDFLCASCNGLICLHSDKSTIKIANLATGECMHLVKPVRNSKTDHFSYYSFGFHP VTKQYKVMHFLRDEHLHVGTSFSIIQVYTLGDEKWRDVRTPQALSLRCVERSGVVNVG GAMYWLTEDEESVWKHAVVTFDLSEELFQWLQLPAVDPANYVLGDPDQWLITEVDSNV SVSYYETGKLHIWTIDSKIEQSWSQKYNIRLSMLEVPGPHWICGDKIILHDFNKNLYF YELMGKNSEIESSKLVKQLRFSPRNNMQCFMFVKSLVRLDAFRKAGVVRRPKRQEGWK LKKWEVWMDRLHRLENHCRSIHDMKHKIYENADKMGMEIKLDLQQTPDLDSSLRLINW LEYRRVLEILCVNLDNMHEVLTVMNNTTGAAHNKESHVADQGTSSSAVGISGS</aaseq>

Gene Sequence

<dnaseqindica>755..2017#2110..2169#2292..2384#2735..2791#3381..3419#ctctttccctttcgaaaccaccgaaacccaccagcggcgaggggagcggacgccgaggcggcggcggggttcgtcgatgcgttcgtaagtggcaaagtttcgcaaaatttcgccttctctggagtgggtgttacttcggcattggtttctgttggttccttggcgacaggatgagatgtggttagggttcttcgtgtggttactgtggattccgggagaattttctgtcttggagtgggggagaattttgtgtgaattttaggttgataaatgaatagtgatggctttccttgagttgaggggtgtttgatcttgaattttcttgattgatcccacctgaattagattcagaagtaggagcatgcttatcctggaaattggctaacagaggagtgacactatgacagggaagaaagcgaaggaatgcaggagtggatgatattgtcagagtagaaaaaaaaagtttttcccccctcttttatgggcaaagatatgttagtaccatgaagcttttgggcagtcataaggaggagaaaggggtaatcttgatatggtggtgattagtttcttcagttccattgttcctctgtgatagttcattatctaaaaaacctctgtgatagttaaaattgacttgaattatattgcttaaatgtattaaatgcatggtttatacgttcctcgattaggtttgttctgaaattttgtgaaattattgctttcaggaagatctggtagatcctaggagcaaaccatggcttctaagaaagccttggcaatgcagccaagcaagaaaatttgcatgaccttgttgccgcaagacattgttgaactgatacttctgaggcttccggtaagcactctgctgaggtgccgtggtgtctgcaagcaatgggatggcattattcgggatcctcagtttgccatggtgcacatccagcgtgcgccgcgtcgccccctatttttctttcaacgagagaatttagtccatctcctctaccctagtgaagcaatcctctttgatgaagcatggtcaccatcaaaatgggttgtacctgtgatcgagcctgatgattttttatgtgcttcatgcaatggacttatttgtttacactcggataaatcaacaatcaagatagccaaccttgcaactggtgaatgtatgcatctagtaaaacctgtcaggaactcaaagactgatcacttctcttattacagctttgggtttcacccagtgacaaaacaatacaaggtaatgcactttcttcgtgacgagcacctccatgttggtactagcttcagcataattcaagtttacacactcggtgatgagaaatggagagatgttagaactccacaggctttaagcttgagatgtgtggaaagatctggagttgtcaatgttggtggggcaatgtattggctgactgaagatgaggaaagtgtttggaaacatgcagttgtgacctttgatctcagtgaagaacttttccagtggttacagctcccagcagttgatcctgcaaactatgtgcttggtgatcctgaccagtggctgattacagaggttgatagcaatgtgtctgtaagctattacgagacagggaagctgcatatctggacaattgacagcaagatagagcaaagctggagtcagaagtacaacattcgcttatcaatgcttgaagttccaggaccacattggatctgcggtgataagattatcttgcatgattttaataagaacctatatttctatgagttgatggggaagaattctgagattgagtcgagcaagttagtgaagcaattgagattcagcccccgcaacaacatgcaatgctttatgtttgtgaagtcgcttgtacggttggatgcattcagaaaggctggtgttgtgcgtaggccaaagcgacaggagggttggaaattgaagaagtgggaagtgtggatggataggctccatcgactagagaatcattgcagaagtatccatgatatgaaacacaagatttatgtatatagctagactttctttacataataggattcacgaatttttcttgatggtttgacaaattcctaactcatagttactcttttctgtaggaaaatgcagataaaatgggcatggagatcaaactagatttgcagcagacaccagatttggtaaacttactgcttctgcatcgaattggaagttgtgcagcttttcatatttctggtaaaaaatagctgtgaatatattgtaattaaaactattgcaattatcttgtgtgtgaatgctgcaggatagttccctgcggctgatcaactggttggagtataggcgggtactagagatattgtgtgttaatctcgacaacatgcatgaagtattaacggtatgtgggtgggctgatgtgtttacttcttagggtctctttgtttaggcttagttttttaagtcagcttttggcttatataatttataagccgatggatttaaagtcctaaatttaaggatgaaattatacctctatctcacataagccaaaaaaaaaaaacttctccaacctagcttttagcttaatagtgtaatactggcttatggctttaaaaaagccaaacgaaaaaactgcttatttttttagacttacactttttagctcataaaaacaaagagggcctaattataactatttgtggtttgtttttgtgtcttgtaaaactgacaaaatttacctatatttaggtcatgaacaacacaactggtgctgcccataataaggaaagccatgtggcagatcaggtagctttttttataaagatatgatatatgttcactgaaataggcgcctgtgggttcttgttatttattcctgttctgaccgttttctttcagtaagaaacaaatgaaataatgaccttctattttcatatattggtatgacagtgttccctacttccctttacgtagctgtgtcttgtaatcatatttttattattgacaccaaatttattgatgttttgcaccccagactacacacacataaacacaattgacatgctgactgaaaatgttgaataaataatgctgaggacaaaacctttatttgtgcaatcttaccttatgctatgaacagccatagtgcactgtttcattcatcataaagacaaaaggtaagataacaagtgcaccgcaaataatcgtcacagtttacatggttttagatcatttaggccagcagcatatcctttacccataagaaaaaagaaagaaatataagaaatactgctacctttttgtcttgcagtgggttaataagtattgcactttgcatttcctggcatgcaatgactaactcttgtatttgatcccaactcccacaatttcacagggtacttcgagttcagctgttggcatatctggctcatgacaacgacgacaatgttaacctcatgatattttggtgatccttaagtttgtagcagcacaaaactgagctgacacttttagcttttgtctgttcaaccatggcatctgcctatcatctttgacgccattatgtctgtcatcttttcttaaaatgttactgctaatgtcagttattgtttaccgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0479100, RefSeq:Os09g0479100