Os07g0627300

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Revision as of 08:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0627300| Description = Similar to Myb-related protein B (B-Myb)| Version = NM_001066879.1 GI:115473490 GeneID:4343977| Length = 4589 bp| D...")
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Gene Name

Os07g0627300

Description

Similar to Myb-related protein B (B-Myb)

Version

NM_001066879.1 GI:115473490 GeneID:4343977

Length

4589 bp

Definition

Oryza sativa Japonica Group Os07g0627300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26658942..26663530

Sequence Coding Region

26659181..26659288,26660148..26660194,26660288..26660344,26660469..26660541,26661147..26661202
,26661296..26661475,26661550..26661743,26661832..26661971,26662061..26662203
,26662286..26662434,26662521..26662885,26663001..26663105

Expression

GEO Profiles:Os07g0627300

Genome Context

<gbrowseImage1> name=NC_008400:26658942..26663530 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26658942..26663530 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccggacccgatctgaccccacccgccgccgccgcctccgccgaagcgccgtcggcgtcggcggccaagaaggaccgccacatcgtgagttggagcaccgaggaggatgatgtgcttcgtactcaaattgcgcttcatggaactgataactggacaattatagcggcacaattcaaggacaagacggccagacagtgcaggagaagatggtacaattatttgaactcggagtgcaagaaaggagggtggtccagagaagaggacttgctattgtgtgaggctcaaaaagttcttgggaacaaatggactgaaatagcaaaggttgtctcaggcagaactgataatgcagtgaagaatcggttttctactctatgcaaaaggcgggccaaggatgacgagctattcaaggaaaatggatcattatgttccagtacaagttcaaagagggcattggtacaaactgggtgtctcacatctggtgcaagtggctctgcaccacctattaagcagatgaggccatgtaattctgatttcaaagagaatatgacaccaaatatgagattagttggacaagacaagagcacacaagattctcgacagcctcttgcaattgtttatcaaaacaatcaagataatatgaatacaatggatacccaaaatcttgttgctaaaactgcagcaaaacaattatttgcgggggaacagaattgcgttaagcatgagggtaattttttgaacaaggatgatccaaaaattgctactttattgcagcgagccgacttgctttgctccctagcaacgaaaataaatactgaaaatacaagccaaagcatggacgaagcctggcagcaactacagcatcatttggataagaaagatgataatgacatgtcagagagcagtatgtcgggaatggcttcactcctagaggatcttgacgatttaattgtagacccctatgagaatgaagaggaagaagaccaggatttaagggagcagaccgaacagattgatgtggagaacaagcaaaattcttcacaaactagcatggaagttacatcacaaatggttcctgacaataaaatggaggactgcccaaatgataagagcacagaagacaataatatggaaccgtgccctggtgaagacataccaacatctgaaaacttgactgaggctgctatcgaagatagcttgcttcaatgtgtggaatacagctctcctgtacacacagttattcaagctaaaacagatgcagaaatagcagcatcggagaatcttagcgaggttctcgaacataacaggcttcagtgtattcaattagcctcccctgctcagacaactaccccagttgaagcaaatgcagaaacaccagcttctgagaagttacgcgaggttgtcaaatgtaacaatccttcatgtatcgaattcacttcgcctgctcatacagtcccaacattcctgccgtacgcagatgacatgccgactccaaaatttactgctagtgagaggaattttttgctgtctgtgcttgagttgacctcgccagggtcgaggccagacacttctcagcagccttcttgcaaaagggctctccttaatagcctatga</cdnaseq>

Protein Sequence

<aaseq>MATGPDLTPPAAAASAEAPSASAAKKDRHIVSWSTEEDDVLRTQ IALHGTDNWTIIAAQFKDKTARQCRRRWYNYLNSECKKGGWSREEDLLLCEAQKVLGN KWTEIAKVVSGRTDNAVKNRFSTLCKRRAKDDELFKENGSLCSSTSSKRALVQTGCLT SGASGSAPPIKQMRPCNSDFKENMTPNMRLVGQDKSTQDSRQPLAIVYQNNQDNMNTM DTQNLVAKTAAKQLFAGEQNCVKHEGNFLNKDDPKIATLLQRADLLCSLATKINTENT SQSMDEAWQQLQHHLDKKDDNDMSESSMSGMASLLEDLDDLIVDPYENEEEEDQDLRE QTEQIDVENKQNSSQTSMEVTSQMVPDNKMEDCPNDKSTEDNNMEPCPGEDIPTSENL TEAAIEDSLLQCVEYSSPVHTVIQAKTDAEIAASENLSEVLEHNRLQCIQLASPAQTT TPVEANAETPASEKLREVVKCNNPSCIEFTSPAHTVPTFLPYADDMPTPKFTASERNF LLSVLELTSPGSRPDTSQQPSCKRALLNSL</aaseq>

Gene Sequence

<dnaseqindica>240..347#1207..1253#1347..1403#1528..1600#2206..2261#2355..2534#2609..2802#2891..3030#3120..3262#3345..3493#3580..3944#4060..4164#ccctttacccccatctcacactccaccccccctctctctcgtttcctcctctccacccaacccaacccaactcggtcgtcgtcgtcgtcttcctctcgaatccacggttcaaaaattccctccactcgcgcccatttccccaaaccctagccggccccggctcgccgccgcccgccgcccgccggctgcctacctcggcctgccgggatccgtgcgcggaacatgcgggatcccggaccatggcgaccggacccgatctgaccccacccgccgccgccgcctccgccgaagcgccgtcggcgtcggcggccaagaaggaccgccacatcgtgagttggagcaccgaggtgcgtacgagttgtcgtggtctatcgagtcgtgtgtttctggattttgggagttttttttttgggtgcgtttgcgctttcctgctcgatttggttgcctgaaattttggggttccactcctgtagcaatcattccccttctttatttttttgggggctaatatgcagtggatttttcacgtaattaggcatgacctatcgaaatggactttggttgggctcctcgcgcctaatttttgtggttttaggcgatattcgtgaggattgagaataattggagtttgaatttgtgtctacttttcaagattttggttgggttcctctcacctaattctatggtttaaggcaatattcttcgtgagcattgaggataattgaaatttgaatctgtgtaccttttagataatggaaaagtgcatcacacttcctggaatttgtgcctttcccgctcgatttcgatgcctagaacatgggggtcgaattagttctcgacgcctctagcaattattccccttctttttgcctaacgaacagtagatttttcacatagttaggcataatctatctaaatggactttggtttgattcgactcctgcctattttttttggtctaaggtgatatttgtgagcatcgagaatagtcgaagtttgaatatgtgtccctttcttctttttgaaaagtgtattgcatttccaagaacttgtgcctacataattataattaattataattataatataattataattgttagcttcagatgctgtcgaacctttccttgggagtgcgtctgcgattttttgtttaacttttagaccaaattgtttttctgatgtttgcacctttcttcctgttaggaggatgatgtgcttcgtactcaaattgcgcttcatggaactgataagtatgaattcttcccacttcccatctcaattgactttttttttctagatttaatcaccatattttacactgtttttccttttcctttcggtagctggacaattatagcggcacaattcaaggacaagacggccagacagtgcaggagaaggtgtgtacagtgtacctcgccatcctctgactaaaagagtggttttattggaatttcgttcgaattttttacgaaatatgcatgccgccctgttcattttttctttgcttggttactgctgcagatggtacaattatttgaactcggagtgcaagaaaggagggtggtccagagaagaggacttgctattgtgtgaggtgggatattgatattgtgacattttaattatttggtccagacactgaatttccctgaagttaggaattgctgcataaaacacttagatttctgatttggcaaatatgcgtcagtttcatgaatttgggaattttggcagacactttgattttattattaggaaccatttgtgatgtaacttttgggccaaactttagatttctgaattggcaaatatgcggtcggttacttcctcagtgagacaacaggccaggcatattgctatgcccatggaattgagcatgtacgtatgcagcttttcagatttttgggaaaagaatgggattcttttgtaaatagcaggagataggatttatatttttgtatatataagagaagtctagatgggcttgcgcattgattagttttgcaatgtcatatttttcttcttattattttggctgcaagttttatgctctgacagacttggaactccgcatactggaaaccctaaaccacctgttctgcatagatttgtggttgttttcataattatttgtttctaccatggattccttaacaagattgaatcatgtattcttctctacttggaattgtcatgcaggctcaaaaagttcttgggaacaaatggactgaaatagcaaaggttgtctcaggcaggtgggtttcttgtattatgcagtttactgcaagatgaaaaaaatacatgtaataaaatatctgacatgttttttgtttgtttgtccacaacagaactgataatgcagtgaagaatcggttttctactctatgcaaaaggcgggccaaggatgacgagctattcaaggaaaatggatcattatgttccagtacaagttcaaagagggcattggtacaaactgggtgtctcacatctggtgcaagtggctctgcaccacctattaagcagatgaggtacacataacactagcatcactattttctattaagcatgcgaagcaacttacatttttctcttctgcaactaggccatgtaattctgatttcaaagagaatatgacaccaaatatgagattagttggacaagacaagagcacacaagattctcgacagcctcttgcaattgtttatcaaaacaatcaagataatatgaatacaatggatacccaaaatcttgttgctaaaactgcagcaaaacaattatttgcgggggaacagaattgtaagcctgttttcctctataatgtgcatttgagtttgatgtatttgtcttgtcccagctttaatcacagctatgtgcataattgcaggcgttaagcatgagggtaattttttgaacaaggatgatccaaaaattgctactttattgcagcgagccgacttgctttgctccctagcaacgaaaataaatactgaaaatacaagccaaagcatggacgaagcctggcaggtatgacagcaccaacttgttctaaatttggaacttaggcttgcagccttgtactctatttgaaataaactgtgctatgcctgtttcagcaactacagcatcatttggataagaaagatgataatgacatgtcagagagcagtatgtcgggaatggcttcactcctagaggatcttgacgatttaattgtagacccctatgagaatgaagaggaagaagaccaggatttaaggtaataatcatcatctggtcatcattttggttaaatctattttctcagttgttgacactatctaccattactgtgcaaacagggagcagaccgaacagattgatgtggagaacaagcaaaattcttcacaaactagcatggaagttacatcacaaatggttcctgacaataaaatggaggactgcccaaatgataagagcacagaagacaataatatggaaccgtgccctggtaacctatgctcttaattattactttggtaaaatgctctttaaaccacatatagaaaatgaactaaattctttaagctaaaccaggtgaagacataccaacatctgaaaacttgactgaggctgctatcgaagatagcttgcttcaatgtgtggaatacagctctcctgtacacacagttattcaagctaaaacagatgcagaaatagcagcatcggagaatcttagcgaggttctcgaacataacaggcttcagtgtattcaattagcctcccctgctcagacaactaccccagttgaagcaaatgcagaaacaccagcttctgagaagttacgcgaggttgtcaaatgtaacaatccttcatgtatcgaattcacttcgcctgctcatacagtcccaacattcctgccgtacgcagatgacatgccgactccaaaatttactgctagtgtaagctttcaactgcttgacatatgatatggccggttcatatcgaacatataatacttacctgaaaaaaccatatgacaaatatatttacatttatatttatttgaatttccaggagaggaattttttgctgtctgtgcttgagttgacctcgccagggtcgaggccagacacttctcagcagccttcttgcaaaagggctctccttaatagcctatgaaactgttataagtatatttcagttttttttcctgcattattggtgtgcctgggatctaaacccaagcctgccatgcatgccccctcagcatgcctactattcagcgtgtgttaggaggttctttgacatactcctatttgcatcaagtttggatatctcatatccaagtttagctgtttgtatatgagatctcaattgttttaagagtctcatagtttgtttggttgtacatattgcattggcggtgttgtagtagcatcatacaggaattaaaaggggcgatggtgtaccaaagagtttacagcttgtatccaaaatatagaataagtactattctttgtgtaattaactcttgtaacctttctatgttgtacggaatatattggtttggtgtgtagtgtgatttaacagtttccttctgactg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0627300, RefSeq:Os07g0627300