Os07g0633200

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Revision as of 08:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0633200| Description = Similar to SC35-like splicing factor SCL30a, 30a kD| Version = NM_001066907.1 GI:115473546 GeneID:4344009| Length = ...")
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Gene Name

Os07g0633200

Description

Similar to SC35-like splicing factor SCL30a, 30a kD

Version

NM_001066907.1 GI:115473546 GeneID:4344009

Length

3128 bp

Definition

Oryza sativa Japonica Group Os07g0633200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26925702..26928829

Sequence Coding Region

26926464..26926612,26927139..26927216,26927948..26928112,26928190..26928291,26928398..26928545

Expression

GEO Profiles:Os07g0633200

Genome Context

<gbrowseImage1> name=NC_008400:26925702..26928829 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26925702..26928829 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagaggctacagttacagcccatcaccacctccaagaagctatcggagaagggccagcagcccaattccccgtgaccgttatggtggacgtggtagagatctcccgaccagtcttctagtcaggaatcttcgtcgggactgccggccagaggaccttcgtcggccattcggacaatttggtcgtctcaaagacatatatattccaagagattactatagcggtgaaccgcgtggatttggatttgtccagtactacgatcctgatgatgctgccgatgcaaaatactacatggacgggcaggttattctgggcagggaagtagctgttgtatttgcagaggagaacagaaagaagccttctgagatgagatctcgcgacagaataagtggcagcagaggtcgttcctatgaccaaaggtactctaggtcaccgcgatactctcctcctccaaggggccgctcgccttaccgcagcccgagctactcaaggtctccttcgcctcggtatgcaaggcgcaggatgagggagaggtcctactcaccagttgagagcagatcaaggagcaggagcccggtcgaggaaggatacggtggtggatccacacggagagagaggtcgctctctgtcagtgaatga</cdnaseq>

Protein Sequence

<aaseq>MGRGYSYSPSPPPRSYRRRASSPIPRDRYGGRGRDLPTSLLVRN LRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQ VILGREVAVVFAEENRKKPSEMRSRDRISGSRGRSYDQRYSRSPRYSPPPRGRSPYRS PSYSRSPSPRYARRRMRERSYSPVESRSRSRSPVEEGYGGGSTRRERSLSVSE</aaseq>

Gene Sequence

<dnaseqindica>763..911#1438..1515#2247..2411#2489..2590#2697..2844#agaatccaaaactccagaggcgaacgcgatgcgacgagacgagacgaaccgaagaagcattccctccctccgctcgagcccctccgttttgatccgattcgctcgcggtaagcgtgattccatcgctgtaatcgcctgctaggtcggttgtgatggtgagattgtttcctgtttgatctccgggatgaagcctaaaccctaggagaggtgtgtttatgagcagtaacataattcgttgggtgattttggttatataatgatccggatcgatgctgtagttgattatgtggtggctctaggggcgtctttaatctactagttcgttaggtgcggttggatggggtttgggatgatttggtcgtgatgcttggtgaatttgtggtctcgcactgtgatgctgcgtacttacacactgaaattctcgttttcaaaaaacaaacgctgaaattctatgcggaaactagtgttgttagttggcgccttggtagtatagacttgtatagttctctgcaattattcggctgtgtggtgattgtactctgaagcgctcgattaatttctacctttttactttctgtaaatagtttaagccatggacttaatttcgattagagggaatatgcttgcgctatgctcttgagacaattgattacttcctgtttattattattgctagtgtattaacgctattacatttgtttactgctagttttattttcttttctttttctaatcttatgctgtttgttgttctagattgatatggggagaggctacagttacagcccatcaccacctccaagaagctatcggagaagggccagcagcccaattccccgtgaccgttatggtggacgtggtagagatctcccgaccagtcttctagtcaggaatcttcgtcgggactgccggtaaaatttcttgaaatttcctgtggctagtaattgcgagcgcacaacttgtagatgtgccatgtatgaaatttatactttgttgttgaactcgacatatttacaaaatattgtacggttacgcatctgtggcattctcaagttctttcttttgtgacgctctgcttattgagctaagatggttttgtgagcctatatgtgttctttaattatcacttggtgctactacattggtaattggagtgataaatttcaatatttataaaattccagttccagtcttaagccggttatagcggccaaaagaataggtatgtctttgagctgcatgctgcatgcttttctgtgtgcccgtggaaatttggcgcgaataattggcatcaaatttaaatgcattcctgaagaggaaatcagacatttagttgaagcttcattatgttcttggttatgattcttgtatgtactgcaactggaattccatctttcctctttagcccttttaactcacagtacattatgtatgcaggccagaggaccttcgtcggccattcggacaatttggtcgtctcaaagacatatatattccaagagattactatagcgggtaaggcaccgtatgtagactagtactccctccgtttcaccatgtaagactttctagcattgcccacatatatatagatgttaatgaatataaacacatatatatatgtttagattcattgacatctaaatgaacgtaggcaatgctagaaagtcttacattgtgaaacggatgaagtattaattagcatttacaccagcagagactacttaaaatttatagctgggatttatacattgacataaaaagtgcactctgcgaactctccttttttttaaaaaaaaagtgtgttctagttttactagcagacattaaaatacttctgtcatccacttgggattaacagtgaaaacaagtttgtgaagacacaagtctttagtgattcaagtctgttgaagagaagggaagagactgagagttgcaagttaagagatgtgcaacataaatattacagatgaagagaagaaatgtaattacgggtttaagagatagttcaaagtcatgaagtgtttgaagtctatatttataatctgacaggtgcaaggtcagaagcagagtgcacactcttgttttacttaatttgtattcaatgctgtacaaccatgaaaagcttcataagtgaatttgtttgtttgctgggtgtcgcatagctgaaaacagaaccactgccatttttaagtaagactgttttaaaccttttattcagacatccatttctttgtccttttcagtgaaccgcgtggatttggatttgtccagtactacgatcctgatgatgctgccgatgcaaaatactacatggacgggcaggttattctgggcagggaagtagctgttgtatttgcagaggagaacagaaagaagccttctgagatgagatctcgcgacagaataaggttcgttgtcccatcctccctagcgcaaatgcataaactcgctgctctattcacttatctgcttgcacaatctgcagtggcagcagaggtcgttcctatgaccaaaggtactctaggtcaccgcgatactctcctcctccaaggggccgctcgccttaccgcagcccgagctactcaaggtatatatgcgcacacgctctttctgtcttcatgcttcagcctaccagcttcaaactactgttgcatttcacaatgacacgcttgaaaacatgtctgtcttggcaggtctccttcgcctcggtatgcaaggcgcaggatgagggagaggtcctactcaccagttgagagcagatcaaggagcaggagcccggtcgaggaaggatacggtggtggatccacacggagagagaggtcgctctctgtcagtgaatgaggtctagagcgctaccggtaatcttcaactagtagtcgctatggctttgcgaaccatatgttactgtcgtgctgtagtggtatcaataacttggcaaatgttgcgtcattacgcctttcctggaagatcgcaaacatattaagttacaacgccggtgaattctgctcactttggagttgttcttgctttgtgcttattttgctgtggattctgtagaaaacgttttgatatggttgcccggtggatggggatctggcacgatggtcgaaccttggagcatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0633200, RefSeq:Os07g0633200