BGIOSGA018404

From RiceWiki
Revision as of 16:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018404

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018404, complete gene.

LocusTag

OsI_19237

Ensembl Transcript ID

BGIOSGA018404-TA

Ensembl Protein ID

BGIOSGA018404-PA

Length

5045

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12255292..12260336

Sequence Coding Region

12260163..12260336,12255292..12256113

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12255292..12260336 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12255292..12260336 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTGGCGCTGCGAACGGCGGGGTGGCTGGACCGCAAGCTGGTGAACCTGCTGTCCGCCGAGCTGCTGGAGGCGCTGGACAACAGCTACAACCTGGGCGCCAACGCGCACGCCATCAAGGCTGAGCTCCTCTACACGCAGGGCCTGCTGCACAGGGCGCAGGGCCGGAACATTCTTGGGGTAATTGTTTGGAGGCAATTTCAGGCTTTTCCTGGGCAACAGAAATGCTCAATGCCAAATCTGCGTGAACTTGTTCAGAACTGTCCGCGGTTGTCTCTACCTCCCATGCCTTATACACATATGTTACAATTGGTGGAAGTGGCAACTCGGCAATATATACTTCTGTACAACAAATACACATTGGAAATCGGAGGAGTAGATAAAAATTTGTGTGCCTTCAGTAAACTGGATAATTTGTTGGCATTCCATGACGTGCAACGGTTAGTTCGTGTCACCATCAAGGTATGCTCGTCTGTGCCATTAGCTACCCTGCAGAAGCTAACCTCGCTAGAAGCATTGGTTTTCGAGGATTGCAGCAGCCTATCATCTGGAAGAAGAGAGAATGGTGTCATCCAGATATCAATAAAGCATCTTGTTCTCAGAAACTGCAACATCACAGGGAAGGAGCTGTCGGAGATTCTTGCTTGCTATACTTGTCTTTCTCATTTAGAAATGGAAGATTGCAATGGCATAACAGGGCTGAGCATGCAACAGAGCGACCATGAAATGGACGGTGATGGCAATGATGTTGATATGTTGCAATTCCCATCCAAGCTCACCAGCACATTAAGCAGATTAGGTATCTTCTCCAAGAATCACCTAACCCTCAATGTGAACAGTGAAGTGCTGGGGAAGCTCATGTCCCTCCAGTGGTTGCAACTTGGAGGATGTGTCCTCTCTTGTGCAGCAATGCAGGCTGTTGATGACGACCTTCTTCCCCTGGCAAACAATCTCAAGGTGTTAAGGGTTTACGGTTATGACAAGCCTGACTAG</cdnaseq>

Protein Sequence

<aaseq>MDVALRTAGWLDRKLVNLLSAELLEALDNSYNLGANAHAIKAELLYTQGLLHRAQGRNILGVIVWRQFQAFPGQQKCSMPNLRELVQNCPRLSLPPMPYTHMLQLVEVATRQYILLYNKYTLEIGGVDKNLCAFSKLDNLLAFHDVQRLVRVTIKVCSSVPLATLQKLTSLEALVFEDCSSLSSGRRENGVIQISIKHLVLRNCNITGKELSEILACYTCLSHLEMEDCNGITGLSMQQSDHEMDGDGNDVDMLQFPSKLTSTLSRLGIFSKNHLTLNVNSEVLGKLMSLQWLQLGGCVLSCAAMQAVDDDLLPLANNLKVLRVYGYDKPD</aaseq>

Gene Sequence

<dnaseqindica>1..174#4224..5045#ATGGATGTGGCGCTGCGAACGGCGGGGTGGCTGGACCGCAAGCTGGTGAACCTGCTGTCCGCCGAGCTGCTGGAGGCGCTGGACAACAGCTACAACCTGGGCGCCAACGCGCACGCCATCAAGGCTGAGCTCCTCTACACGCAGGGCCTGCTGCACAGGGCGCAGGGCCGGAACGTCACCCACAGCCCGGAGCTGGCCGGCCTTTCTCCTGCACCTCACCCACCTTGCCGAGGACGCCGACAACGTCCTCGACAAGGTGGACTACTACCGCATCCGCGACGATGCCAAAGGCACCTCCCGCGGGCTCATCCGTCGGTTCTCCACCCACGCCCGCCACTCCCTCGGTAAATACCACCGCTCCCTGACCTCCTCCTTGTCGTGCTCCGCCACCGTCGAAGCGGAATTCTTCGATAGATCCACCGAGTCCGAGAGAATCAAGTCGCTCATGGCGCATATGCAGCCATTGTGCGCCAAGATCTCCAACTTCCTCAAGCTAGAGGTCATGGACGCCAAGCACCGCACCACTGCACTCAACAACACCGCAGCTGCTTTCAACGAGCATGTCGCCACCACCACCTCGACCAGCCTCGAGGCCAAGCTCCACGGGAGGTTCGTGGAGTTCTATGCCACTAGTAAGGAGATGACCTGTGGCCGTGACGGCCTCACTGTTCTACCGGTACTAGGACCGGGGGGGATCGGCAAGACAACCTTCACACAACACCTGTTCCATGACCAAAGGGTTAAGAAGCACTTCCACGTTAGGATCTGGGCACATGTGTCTCTCAATTTCGATGTGCTTCGCCTCACCAAGGAGATCTTCGACAGCATAGTCGCCGGTGAGGTGAGTTGGGGACGAAGACCAAGCAATGAGAAGGAGCCACGTAACCTTGAAAAACTCCACAAAGGGCTCCAGCAAATGCTGCAGTTCAAGAGGTTCTTGCTCGTCTTGGATGATATGTGGTCATGTGACAACAAGTACAAGTGGGACAAATTCTTGAACCCGTTCAGGAAAACAAGGGTCAAGGGTAGCACGGTCATAGTCACAAATCGATCTCAAGAGACTGCAGACATGGTTAAATCTGAAACCGACGTGCTCATACGTCTAGATGGCCTCGATCTTGAGGCGTTCTGGGCGTTCTTCTTATCATGCGCATTCGGCGACGAGAAACCAGAGCACCACAAGGAATTGCTTGATTTAGGACGGGAGATCGTGAAGAAGCCCGGGTACTCCCCACTCGCGGCGAAAACCGTGGGTCAGTTACTGAAGAAGGATCTTACCAGGCGGCACTGGAGTAGGGTTCTTGGTAGCAAAGAATGGAAGCACGGAAATAGTGTCAACGATAATAACTATCCATATATTACGCTTACCCTGGATTCTTGTCTTGCTTAGGTTTACTTGAAAGCATGTCCATCGTAATGCACCCCATGTTGCCTTACTCGATCCAACTATCGTCAATGAGACAAATCTGAAAACCGATCGAGCCAACATGGTGGAATATATCAAGGACTGCTTATTCGTCCGTCAAGACAAGAATTTTATTATGTGTGCCTACAATCAACAGTAAGCGTGTACCCTACTTAGAATCAAATGCGCGACGCATATAGCTTTAGTATTTCACTTGCAATTTATTAATATCGTAGGAGTCATTGGATTCTTCTAGTAATAACGCCAAAGTACAGTTTGGTACACTACCTTAACTCCAATATCAATCCAAAAATATATAAATGATCAGGCATTGAAGCTGCCTTGAATGAGGCATGGGACCAATATGTGGCAAAAGGCGGGAGGCATAAGGAAGGGCATCCCACACTCGGTCACAAAAAAGACTTCCCAATACGTCAACAAATTGGCGACCAGTGTGGGTTCCACGTCTGCCATAACATGAGGAGCTTCACAGACAAGGTGACATTGCTCGACCTTGAGGTGTGTGCTTCAATGCTACATATAGATAGGATGACAACTTTCCAAGTATATACACCAACTTGGCGCCTCACATGCAGGAAAAACTTTCTAGGATCCCGGAGAACAACTTTGATATCATTAGAGAGAAGATAGCACGATTCATACTAGATGATATCTTGTCCCAGAATGGAATGTTTAGAGTCAAGTGCTAGCTAGCTCGTCTCTGAATGGTTGAACATTTGCAATGTTTGCGACAGACATTTGATTTATGTAAATATTCTTTGTAATACAATTCTGCACGATGTTTCTGTATATACTTGCATTTCTAATTACATATAAAATTGTTCCAATTTATAACTTAGTTTTGTAGGTTTTGATGCATGTCAGCGGTTTGGAGAGCAAAAATGGATGTGAATGACATATATATGTGAATGGGTTGTAGATGTGAATGTATATGTATTTGATTTTGTGGATGTGAATTGGCTGTGGCTATGATTGAATATGTGAATGGACTGAATTTCTGAATGGATGCTAGGAATGGGGTTGCTGAGAATAGGACTATACATATATACTTCTGTCATTTTTGCAGCGGGCATGGCTAGTAAAGGTCTGAGGCTAGCCAAAAAAACATTTTTTTTGTTACATACTCATCCCTGACGGGTAATTAGCTAATACCCGAAAGTCATCTGTGACGGGCCCTAAACAAAGACCGATAGAGATATAGCCATCCGTGACGGGCTCTTAGTGTAAGTCCGTTAGAGATAAATCATCCGAACTGGGACTAGTTTGACTCAACAGGTGATTCAAACCTATCGGTGACGGGCTGTTCCTTAAGGCCCAATTGAGATAATTACTCATTCGTGACGGGCTTTGTAGTGTGCCCGATTGAGATTATTCATCCGTGATGGGCTCCTACCTTACCTTGTTTGACTCGTACTGCTTGGTCAATCTTATCTGTGACGGGCTTTGCTGTCGGCCCGATTGAGATAACATCCATCCGTAACTAGAGGTGGCCAAACGGGCCGGGCCAAAACGGGCGGCCCGAGGCACGGCGGAACCTGTAGCCGGCACAGCCCGGCACGGCCTGCTACAGTAACGGGCCGTGCCGGCACGGCACGAGTAGCCGTGCCGTGCTTGGGCCGCCGGCCGAGCCCGCGGGCCGGCACGGCTACTGTAGTAAGTCCGCATCTCATCCTTCCGCAAGTCCGTATCTCATCCCTCCCAACTGACGGCCCAGCCCGCTAGCCGCCTCCGCAAGTCCGTTGAGCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCGGCCATCCACGGCCGTGCTTGGGCCGGCGGCTCGGCACGTGGGTCGGGACGGCACGGCCCGTTTCATGAGCCGTGCCTAACGGGCCGTGCCGAAACGGGCCGTGCCGGACCCGTGCCCGTGCCGTGCCGGGCCAGGCCGCCCGTTTGGCCACCTCTATCCGTAACGGTCTTTTGCCCGATTGAGATATTTTCTCACATCAGTGATCTTTGCTTAGTGACAGGGGCTCTACCTTAAAGTGATAAGGCTTGAAGCCCGTTAGAGATAAGCGATCCCATTCTAGTGTTCATGCTACCAAAAAAAACTCCAATCTAGTGTTGCTGAGGTCGGAAAGCTAAAGTTATTGCAGGAGTTGACCATGTTCCAGGTTAGAAGGGAAGATCGTGATGGATTTGAGCTTCAACAGTTGGGGGAGTTGAGACATCTTGGAGGAGCACTCACCATCTCCAATCTACACAAGTCAAAACAAGGGCAGAAGCTGAGAAAGCTAAGCTCAAGCTGAAAAGGAATCTAGTCAGATTAAAACTTGTTTGGGACGAAGCTGGTAGCGAACAAACTGAGGAAGAAGCAAATAGCATTGAGGGTCTCCAACCACCTGCAAATATCAGGGAGCTGTGCATTAAGAATCATAAGGGTATCACTTGTCCTTCTTGGTTTCACAGCGCCAACTCCTTCAAAGCGTTAGAGATTCTACACTTACATGGTGTGTCCTGGAACACATTTCCCCCTTTTGGACAAATTCCATACCTCAGGAAGCTTAAGCTGGAGAACATTGCAATAGAAAACTTCGAAGTAAGGGACGAAAGCTTAGAGAATCTGAGGAGCATTGAGTTTATTGGTATTCTGAGCATGAAAACATGGGTGAGCACAAATTTGATCACTCAGCTTGAGCAATTAAAAGTTTTGAATTGCCCTGTTCTTAGAGAGTTGTCGTTCTCACAAAACATGCAGCTGTTGCAAACTCTGACATAGCACAGTTCCCGTCCTGACTTGCAGATTCTTGGGGTAATTGTTTGGAGGCAATTTCAGGCTTTTCCTGGGCAACAGAAATGCTCAATGCCAAATCTGCGTGAACTTGTTCAGAACTGTCCGCGGTTGTCTCTACCTCCCATGCCTTATACACATATGTTACAATTGGTGGAAGTGGCAACTCGGCAATATATACTTCTGTACAACAAATACACATTGGAAATCGGAGGAGTAGATAAAAATTTGTGTGCCTTCAGTAAACTGGATAATTTGTTGGCATTCCATGACGTGCAACGGTTAGTTCGTGTCACCATCAAGGTATGCTCGTCTGTGCCATTAGCTACCCTGCAGAAGCTAACCTCGCTAGAAGCATTGGTTTTCGAGGATTGCAGCAGCCTATCATCTGGAAGAAGAGAGAATGGTGTCATCCAGATATCAATAAAGCATCTTGTTCTCAGAAACTGCAACATCACAGGGAAGGAGCTGTCGGAGATTCTTGCTTGCTATACTTGTCTTTCTCATTTAGAAATGGAAGATTGCAATGGCATAACAGGGCTGAGCATGCAACAGAGCGACCATGAAATGGACGGTGATGGCAATGATGTTGATATGTTGCAATTCCCATCCAAGCTCACCAGCACATTAAGCAGATTAGGTATCTTCTCCAAGAATCACCTAACCCTCAATGTGAACAGTGAAGTGCTGGGGAAGCTCATGTCCCTCCAGTGGTTGCAACTTGGAGGATGTGTCCTCTCTTGTGCAGCAATGCAGGCTGTTGATGACGACCTTCTTCCCCTGGCAAACAATCTCAAGGTGTTAAGGGTTTACGGTTATGACAAGCCTGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018404