Os07g0634600

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Revision as of 08:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0634600| Description = Similar to Pectin acetylesterase (Fragment)| Version = NM_001066917.1 GI:115473566 GeneID:4344020| Length = 3764 bp|...")
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Gene Name

Os07g0634600

Description

Similar to Pectin acetylesterase (Fragment)

Version

NM_001066917.1 GI:115473566 GeneID:4344020

Length

3764 bp

Definition

Oryza sativa Japonica Group Os07g0634600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27000739..27004502

Sequence Coding Region

27000861..27001035,27001662..27001744,27001878..27002007,27002106..27002179,27002534..27002620
,27002713..27002837,27002969..27003029,27003204..27003257,27003343..27003420
,27003522..27003627,27003715..27003860,27004001..27004117

Expression

GEO Profiles:Os07g0634600

Genome Context

<gbrowseImage1> name=NC_008400:27000739..27004502 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27000739..27004502 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgttcttgggctcttgctgctctggttcttggcttcttggtggtggcagtccatggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagccgtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggcaaacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatgagatatgctaaccaggcacttctttctggatgctctgctggtggtgtttcaaccatacttcactgtgacgagttccgtggattgtttagcggcagtacaaacgtgaagtgccttgctgatgctggaatgtttctggactttgttgatgtttctgggcaacgagaaatgagggacttcttcaatggtattgtgagattgcagggttccggaagaagcctgcctaggtcttgtacctcccgcatggataaaacttcgtgctttttcccccagaatgtggtgccaaacattcaaactccaacttttattttgaacactgcttatgatgtgtggcagcttcaacaaagtgtggcccccaaaagggctgatccgcaaggtctatggcgaggatgtaggatgaatcatgcctcctgtaatagcaaccaactgcaatttttacaaggtttcaggaatcaaatgctcgatgcggtgaggggtttctccggcgcaaggcagaacggtctttttatcaactcctgtttcgcacattgccaaagtgagagacaggacacatggtacgcaggggattctcctcgtctcggtaacaagagaattgctgaagcagtaggcgactggtttttcgatagggcagacgcgaagtacacagactgtgcatacccttgtgatggtacctgccatcatcttacattcaggggagattactaa</cdnaseq>

Protein Sequence

<aaseq>MGCSWALAALVLGFLVVAVHGSEPWLNQTQVYSTNANSGSNGVF VGITLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVKSCVFRKS SRRGSSNHMESQLQFTGIMSNRPEENPDFYNWNRVKVRYCDGGSFTGDGADASAGLYF RGQRIWQAAMDDLMAQGMRYANQALLSGCSAGGVSTILHCDEFRGLFSGSTNVKCLAD AGMFLDFVDVSGQREMRDFFNGIVRLQGSGRSLPRSCTSRMDKTSCFFPQNVVPNIQT PTFILNTAYDVWQLQQSVAPKRADPQGLWRGCRMNHASCNSNQLQFLQGFRNQMLDAV RGFSGARQNGLFINSCFAHCQSERQDTWYAGDSPRLGNKRIAEAVGDWFFDRADAKYT DCAYPCDGTCHHLTFRGDY</aaseq>

Gene Sequence

<dnaseqindica>123..297#924..1006#1140..1269#1368..1441#1796..1882#1975..2099#2231..2291#2466..2519#2605..2682#2784..2889#2977..3122#3263..3379#gctcctccattcttccctcctcctcttccccttcttccagatccattcctcaggaagaaggcagaggctgggagtgggaggaaggcccaagaaccagcaaagaaagaagagaaccatcaaccatgggttgttcttgggctcttgctgctctggttcttggcttcttggtggtggcagtccatggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagccggtatatatgtttccttgttccctgaattgttcgttcattccttgattctagtattttttttccggctgcaaagattgcttttttattggccttgccttgcccccatgtgagctcttggaattgggtcaatggggtcttgggttttccactgattgagtcattgagtggtgtgatactgtgatccggtccttgttgagttgaccctggttggacagagggttcagagcacctgtaaattaggaggagtgtgattgctcatgttttctttttttggtgcccctctttttgtttaggtgctccttgattgagtgatcatgcagtgttaacctttttgttggttggttgtagcatgccatgcatcatgtgtggatcttgatagatatatgcatgtggatctagagccttggaatgtttggtggttgtcatgatgaaaatttccttgctacctagttgggggaaaaggggactcaatgctatctgttttctgttaacttaagttgacattcttgattgtctagcgagtagtgtatcataaattctgaataatttggacccaagtttccatttgcttatagcagggttggttggcaaatctcgatgacagctttctttgtttatcatggcagtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggcaaacagttggcttgtcaatttggaggtgagaaatacaccccaattcccatatatgtgaaccgagagataagtttgagcaaatggcactttgtggcactagagattgttgtatatcgttcaggctttagtagctgatggtgattcgtttggaattccagggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctgaagaaaatcctggtattctttcgatcaattctgtcttgatatagttcatgcgaatattgctattaattattggtggctgacaaattatgactgtgctctcttcttcttagatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactggtgatggggctgatgcggtgagtgcaaattttgtttctgcattttagtgcgttggtttcctgatatttaactgggctgaagggtttcagaagataatcaagataactgatcacctaagtttaatgtttcccaaaggaaaatgtttttcaatttaagtttaagttctcttagatagtagtaatatttagcgtacacgtttcttcctagtgacctatattccatattgcacacagtgtacattccattcaaacaaatattctgaagaaatacatacttcacatccccccaaaaaaattactacataatatacatgtttatgtttttttctactgaactacatgggttcatttatcagagttttctttctccagtctgcaggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatgagatatgctaaccaggtactgatccttccacagctaatcatgttttctttagccttttggattttggaaataatttatgtttccttgccacaactcaattctaccaggcacttctttctggatgctctgctggtggtgtttcaaccatacttcactgtgacgagttccgtggattgtttagcggcagtacaaacgtgaagtgccttgctgatgctggaatgtttctggacttgtaagttcacatatagaaatgagacttgctttgatgcagtttttcttgcccattctttgctatggatgaatactggtagagtaaaagctaatcatctgatattacgttatggatttaattaccatttgcagtgttgatgtttctgggcaacgagaaatgagggacttcttcaatggtattgtgagattgcaggtatctgccactgtccaccatgttatgatacttctgttcgtcatgactgtaacacttcttctacatgttatgctactattaatttatgtcagaatatacgatacctttgaaaaaaaatattttctcaatatctttttttcgcttatgttctcatgaaaattcgaccaaaaacagggttccggaagaagcctgcctaggtcttgtacctcccgcatggataaaacttcggtaaggaaaacatcaagaagtatctaacaaagatatacacagttagtttttcacaatttctttttctaattggtgctctctacagtgctttttcccccagaatgtggtgccaaacattcaaactccaacttttattttgaacactgcttatgatgtgtggcaggtatttgtcagttgttttgcatgttaacggtatgataaagttggtccacaaatataaactataaaatgttcaaggacatgattttattttatattttccagcttcaacaaagtgtggcccccaaaagggctgatccgcaaggtctatggcgaggatgtaggatgaatcatgcctcctgtaatagcaaccaactgcaatttttacaaggtactgggctgttctcccagatccgtgaattataaactgtcaattcaagtctagattggctgaccccctgtgtatgtatgatggcaggtttcaggaatcaaatgctcgatgcggtgaggggtttctccggcgcaaggcagaacggtctttttatcaactcctgtttcgcacattgccaaagtgagagacaggacacatggtacgcaggggattctcctcgtctcggtaacaaggtacgcaaactctgcggtgatgccatgaaaaacattctcgcttcgaaagatttcctgactgtctgaactctgagctcctacatgtaaaaccagtagtctcatcagacccatcccatgtactttttttcttggatatgcagagaattgctgaagcagtaggcgactggtttttcgatagggcagacgcgaagtacacagactgtgcatacccttgtgatggtacctgccatcatcttacattcaggggagattactaagattcattcttagaccaccaccaaatgtaggtggcaaaaagaggggaaaaaagggacacccaatgggaatatatacagaataagaggaaggtatagatagaggatgcaaagctagtgacttgcatggacatgttcatcattactcagatatgatcttagggcagggcctggtgtgcttgctaatgtggcatgatcaggcctctgcatttagctccacacaccgattgattcttttccattgcctgaattccctggatgatgtatctctgaacatttggaccccaatggtgtatctgtatcataaatttacatatccatgtactaaacgtgataatatgaatgaaataagtaatgtgcctgcaagaaacccaatcatttgtcaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0634600, RefSeq:Os07g0634600