BGIOSGA018520

From RiceWiki
Revision as of 16:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018520

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018520, complete gene.

LocusTag

OsI_19006

Ensembl Transcript ID

BGIOSGA018520-TA

Ensembl Protein ID

BGIOSGA018520-PA

Length

3468

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8864743..8868210

Sequence Coding Region

8867432..8868210,8866392..8866446),complement(8864743..8865396

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8864743..8868210 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8864743..8868210 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTAAGGTCAACCTTCCCGCTCGTCTCCCACCTCCCATCCCGCAAACCACCCCCAATCCGCCCACGCCCACCACCTGTTCGGCCCTATGCCTCTTCCGCCGCCTCGCCTCCTCCTCCTCCTCCGCCGCCGGCGTCCGCTTACGTCCACCTCCCCTTCTGCCGCAAGCGCTGCCACTACTGCGACTTCCCCATCGTCGCCCTCGGCACCTCCTCGCCCCCGACATCCCCACACGGCGGGGACGGCGACGACCCGAGGATCGCCGACTACGTCCGCCTCCTCCTCCGCGAGGTCGCCGCCACGCGCCCCGTGTCCGACGACGGGGTGCCCCTCGAGACCGTCTTCTTCGGTGGCGGCACGCCGTCGCTGGTCCCGCCGAGGCTCGTCGCCGCGGTGCTCGACGCGCTGCGGGCCAGGTTCGGGCTGTCGGCGTCCCCGGAGGTGTCCATCGAGATGGACCCCGGGACGTTCGACGCCGCCAAGCTGAGGGAGCTGGTGGGGCTGGGCGTCAACCGGGTGTCCCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTCCGTGCGTGCGGCCGCGCGCACGGCCTGCGGGAGGTGCACGACGCGGTCGGCATCGTGACGGCGTGCGAGGGGCTGCAGAACTGGAGCATGGACCTCATCTCGTCGCTGCCCAACCAGACAGAGGAGATGTGGGAGGAGAGCTTGAGGTGCACGGTGGATGCCCGTCCCACGCATGTGTCTGTCTATGACTTGCAGATCGAGCAGGGAACTAAGTTTGGGCAACTGTGGGTCGAACCTATCAGACTTACCCTAAACCCTGTTCTTGACAAAGTAGCAACTCAATCCTTTTTCATAATTAATGCTTGCAGATATACACCTGGTGTTTATCCGCTTCCAAATGAGAAAGATTCTGCAAACTTCTATAAGATAGCTTCGAAACGTCTTTCTGAAGCAGGATATAACCATTATGAAATCAGTAGCTATTGCAAGACTGGGTATGAGTGCAAGCACAATGTAACATATTGGCAAAACCGGTCATTCTATGCATTTGGTCTTGGATCCGCTAGCTACATCAATGGTATCAGGTTCTCCAGGCCCAGAAGAATGAAGGAATATGCAGAGTGGGTTCAGAAATTGGAAAATGGAGTGTGGAGCCATGAGTCTGGCAATTCTGGGATAAAGGACATGGCAATGGACGTGGTGATGCTATCACTGAGAACAGCATGGGGCCTAGATGTGCAAAGTTTCAGTAAAACCTTCGGAAGGAGTCTGACAGAGTCATTGTGCAACACATTTAGGCCTTTTGTGGAGAGTGGGCTTGTAATTGCCATGGATATGGAACGGCGAGCTTTGCAACCAAGTGAATTTGAGTTGGACTTGCAACATGATGGTGAGAATGGAAGCAGAGTTGCCTTCATCCGTCTGAGTGACCCAGATGGTTTTTTGTTGTCCAATGAGTTGATTTCACTTGCATTTGGAATTATTTCACCATAA</cdnaseq>

Protein Sequence

<aaseq>MLRSTFPLVSHLPSRKPPPIRPRPPPVRPYASSAASPPPPPPPPASAYVHLPFCRKRCHYCDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDGVPLETVFFGGGTPSLVPPRLVAAVLDALRARFGLSASPEVSIEMDPGTFDAAKLRELVGLGVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEMWEESLRCTVDARPTHVSVYDLQIEQGTKFGQLWVEPIRLTLNPVLDKVATQSFFIINACRYTPGVYPLPNEKDSANFYKIASKRLSEAGYNHYEISSYCKTGYECKHNVTYWQNRSFYAFGLGSASYINGIRFSRPRRMKEYAEWVQKLENGVWSHESGNSGIKDMAMDVVMLSLRTAWGLDVQSFSKTFGRSLTESLCNTFRPFVESGLVIAMDMERRALQPSEFELDLQHDGENGSRVAFIRLSDPDGFLLSNELISLAFGIISP</aaseq>

Gene Sequence

<dnaseqindica>1..779#1765..1819#2815..3468#ATGCTAAGGTCAACCTTCCCGCTCGTCTCCCACCTCCCATCCCGCAAACCACCCCCAATCCGCCCACGCCCACCACCTGTTCGGCCCTATGCCTCTTCCGCCGCCTCGCCTCCTCCTCCTCCTCCGCCGCCGGCGTCCGCTTACGTCCACCTCCCCTTCTGCCGCAAGCGCTGCCACTACTGCGACTTCCCCATCGTCGCCCTCGGCACCTCCTCGCCCCCGACATCCCCACACGGCGGGGACGGCGACGACCCGAGGATCGCCGACTACGTCCGCCTCCTCCTCCGCGAGGTCGCCGCCACGCGCCCCGTGTCCGACGACGGGGTGCCCCTCGAGACCGTCTTCTTCGGTGGCGGCACGCCGTCGCTGGTCCCGCCGAGGCTCGTCGCCGCGGTGCTCGACGCGCTGCGGGCCAGGTTCGGGCTGTCGGCGTCCCCGGAGGTGTCCATCGAGATGGACCCCGGGACGTTCGACGCCGCCAAGCTGAGGGAGCTGGTGGGGCTGGGCGTCAACCGGGTGTCCCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTCCGTGCGTGCGGCCGCGCGCACGGCCTGCGGGAGGTGCACGACGCGGTCGGCATCGTGACGGCGTGCGAGGGGCTGCAGAACTGGAGCATGGACCTCATCTCGTCGCTGCCCAACCAGACAGAGGAGATGTGGGAGGAGAGCTTGAGGTGCACGGTGGATGCCCGTCCCACGCATGTGTCTGTCTATGACTTGCAGATCGAGCAGGGAACTAAGTTTGGGCAACTGTAAGTGTTTATTGCCAATTCATGAATCTAATCCCATGTTTTTGAGTAACCGATTGGAAATTTCGGATATATTCTGGCCACATTTCTGTTAATCACTTCATGTTCTGATTCTGTTATGGGGTTTGGTTGGTATGGCAATATGGGCTATGAACTAGGAATGGAAATTAAATAATTTAGAATCATTATAATTCTATTGGGAAGAAGTTTGTATTACTATTTTGCACTTGTTTGTGTTGTTTTTAAGTTCAATGCTCTGCTCAGAACTCACTATGATGATAAACAATTATTGTAACTGGAATACGCTAAAAGGTAAAGGTTTAAGCATGAAATTGTTATTGTTGTCTCTGGCCTTGTCTCATCCAATTATGGGAAAAATATGTCTCATTAATTTGTGATATGTTAATTTGCACTGACCTTTTTATGGGAAGGTACTGATTCTCTTATGTCAGATTTGAAACGCCAGATCAGCTTTTGCCTTTACATGACTACAGATTGAGTCAAACCCTCATTTATGATTTTTTAAATTAAACAAAAACTATGATAGTTAAAATCTCTGTTGTTTTAAGTTCGGTGCTCTGCTCAGAACTCACTAGTATGATAAACAATTATTGTAGTCAATACACCAAAAGGTAAAGAGTTTAAGCATGAAATTGTTATGGTCGTCTCTGGTATGTCTCATCTGATTATGGGTAATATCCCAATACAGATTCTCTTATGTTAGATTTGAAACCCCAAGTCAGCCTTCTCCTTTACATGAATACAGATTAAGGAAAACCCTCATTTATGATTTTTATTTAAACAACAACTGTGAAAGTTAAAATCCTACACATCACTAAAACAATATTCCTCAAGTACATTTTCACCATGCTACAGCATTGGCAGGACAATTCATTGAACTTAAATAATGCAGCATGATATTATTAAAAGACTGTAACTTATTTTGAAGTTTAAAGCTGTAACTTCATCCTGTATATGTGCCTGACAGGTGGGTCGAACCTATCAGACTTACCCTAAACCCTGTTCTTGACAAAGTAGCAACTGTAAGTGTTTATTGCCAAATCATGAATCACATCCTATGTTTTTCAGTAACCGATTGGAGATTTGGGATATATTATGGCCACATGCCACATTTGTGTTAATCACTTCATTTTCTGATTCAGTTATTATGGGGTTTGGTTGGTATGGCCATATGGGCTATGAACTAGAGAATGAAGAATAAATAACTAGAATCATTATCATTCTATTGGGCAGAAGTTCGTATTACTATTTTGCACTTGTTTGTGTTGTTTTTTAAGTTCAATGCTCTGCTCAGAACTCACTATGATGGTAAACAATTATTGTAGTTAGATATAACTGCAATATGCTAAAAGGTAAAAGAGTTCAAGCATGAAATTGTTATGGTCGTCTCAGGCATGTCTCATCTAATTATGGGAAAAAAATGACTCACTAATTTGTGATATGTTAATTTGCACTGATCATTTTATGGGAAGGTACTGATTCTCTTATGTTAGATTTGAAACCCTGGGTCAGCCTTTGCCTTTACATGACTACAGATTGAGGCAAAATCTCATTTATGATTTTTAAGTATACAAAAACTAGGATATTTAAAATCTTGCACATCACTAAAACAATATTCCTCAAGTAAAAGTAAATTTTCACCTTGCTACAACATTAGCAGGACAATTCATTGAACTTCAACAATACAACATGATTTTATATAAAAAAAACTGTAAACTTCCTTTTGACATTGAAAGTTGTAACTTGATCCCATATATGTGTGTGACAGGTGTGTCCAACCTATCAAACATACCCTAAACCCTGTTCTTGACAAAGTAGCAACTTTTGATAACATCATCAACTGTTTTTGTAGTTTTCTGAATTGTCCAGCTAATGCTATAACAAGCTGATAATTGACAATATAGTTGTGTTCTTTTGCGAAATTTTACTCATATTCCTCTAATTCTAGCTGTCATTCCAACCAGTAGGAATTCAGCTCCATGTACATGGATGAGTTGATTGAATGATCAATTTACAGCAATCCTTTTTCATAATTAATGCTTGCAGATATACACCTGGTGTTTATCCGCTTCCAAATGAGAAAGATTCTGCAAACTTCTATAAGATAGCTTCGAAACGTCTTTCTGAAGCAGGATATAACCATTATGAAATCAGTAGCTATTGCAAGACTGGGTATGAGTGCAAGCACAATGTAACATATTGGCAAAACCGGTCATTCTATGCATTTGGTCTTGGATCCGCTAGCTACATCAATGGTATCAGGTTCTCCAGGCCCAGAAGAATGAAGGAATATGCAGAGTGGGTTCAGAAATTGGAAAATGGAGTGTGGAGCCATGAGTCTGGCAATTCTGGGATAAAGGACATGGCAATGGACGTGGTGATGCTATCACTGAGAACAGCATGGGGCCTAGATGTGCAAAGTTTCAGTAAAACCTTCGGAAGGAGTCTGACAGAGTCATTGTGCAACACATTTAGGCCTTTTGTGGAGAGTGGGCTTGTAATTGCCATGGATATGGAACGGCGAGCTTTGCAACCAAGTGAATTTGAGTTGGACTTGCAACATGATGGTGAGAATGGAAGCAGAGTTGCCTTCATCCGTCTGAGTGACCCAGATGGTTTTTTGTTGTCCAATGAGTTGATTTCACTTGCATTTGGAATTATTTCACCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018520