Os09g0479500

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0479500| Description = Disease resistance protein family protein| Version = NM_001070015.1 GI:115479772 GeneID:4347381| Length = 5971 bp| ...")
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Gene Name

Os09g0479500

Description

Disease resistance protein family protein

Version

NM_001070015.1 GI:115479772 GeneID:4347381

Length

5971 bp

Definition

Oryza sativa Japonica Group Os09g0479500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19045580..19051550

Sequence Coding Region

19046330..19046439,19046802..19049574

Expression

GEO Profiles:Os09g0479500

Genome Context

<gbrowseImage1> name=NC_008402:19045580..19051550 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19045580..19051550 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagaaattatcgttctttttgtcataaaaaagataggaatagctgtggcaggtgaaacactgaagctagctaaacccttgcttgcaaacaaaaccgagttaaagaaagctgagctagtaacagcacttccagttaacatgaaactgataaaagatgaacttgaggttatcaatgcatttctgaaggaacttggcatgaatggatgcaaaggtgaagttgtagaaacttgggtaaggcaagtacggaggttggcgcatgatatggaagatgttgtggatgagtttatgtatgttattggcaaaaacaaagagagagagtcacgagcttatgtgaagaaaattatcaagaaacctaaacctttattttcacttgatgaaattgctactaaagcagataggataaacagacagcttatggagctttctaaaagactaggacgttggacccaaccgatattgagtgggggtagtattcctgcaacaaaatatgacactgaacaacaacagttgtatctacctggacatgattattcaattactgatgctgagcttgtaggaattgataaaaatagacaaaccttgattgaatcattgtgtttggaagattgttctcttcggatcattgctgtctggggcatgggtggccttgggaaaagcactcttgtcaacaatgtctacaaaaaagaagcaacagtatccaatttcaattaccgtgcatggctttctatctctcagtcatgtagagtacttgatatttggcgaaacatgctgaaagagctctgtggaaaagaaagcagagagtttgatgctgaaaatatgagcagtacagaactaaaagtggaattaactaaaattctggatcaaaagcggtacttgatcatattggatgatgtctggttggctacagattttttaaagattagagaggttcttgttgataatggcctaggaagcagagtaataatcacaacaagaattgaggaagttgcttccatagctgagaatggttgtaagatcagtttagagcctctagataaccatgatgcatggcttctcttctgtaggaaagcatttccaaaaattgaagatcatatatgccctccagaattagagcagtgtggtatggacattatcgataaatgtgacggtttgcctttagctcttgtggcaatagggagtttattgtccttcaaatcaaagaataataaagattggaggcttttctacaatcaacttatttcagaggtacacaataatgagaacttaaaccgggtggagaaaattctaaatctaagctacaagcacctgccaaaccatctgaagtattgtttcttatattgtgctatgttcccagaagattatctgattcacagaaagagattaattagactgtggatcagtgaaggatttatagaacaaaaaggagcatgcagcttagaagatgtcgctgaaggttacctagcagagcttgtccaacgaagcatgcttcaagttgtagcatgtaacagttttgatagggttcagtgtcttcgaatgcatgacattgtgcgtgaattagccattttccaattgaagaaagaaagtttctgtacaatttatgatgacactcatggagtggcacaagtgggattagactctcgtcgtgtctcggtgcttcgatgcaacaatgatattagatcaagcatagatccatccaggcttcacaccttcatagcatttgacaccaccatggcattatcttcatggtcttctttcattttctcagaatctaagtaccttaatgtattagacttgtcaggcttgcctattgagactattccatattcagttggggagctgtttaaccttcggtttttgtgtctcaacgacaccaatgtgaaggaattcccaaaatctgttacgaagcttagcaatttacaaacattgagccttgaacgtacccagttgttgaatttcccacgagggttttcaaatctaaagaaattgcgccatctgcttgtttggaagttagtagatgctacatacaaaagtctgaataactgggaatctatggagccatttgagggcttgtgggacttgaaggaattgcattatttgaatgaggttcgtgcaactaaagcctttgtttcaaatctaggaaatttatcccagctgaggagcctctgcattacttatgtaaggagtagtcactgtgtgcaattgtgcaactctttatcaaagatgcaacatctcacaagattaaacataagagcacgcaatgaagatgagctgctcttgctggatgatttcacattgtcaaaccctctcgaaaagcttgaactggtaggccagttgtcagaaggaaccttggaatctccctttttctctattcatggatataaactcctgcaaattgaactttcatggtgtaagctcacagtgaatccagtggcccgccttgcagagttctcggatttaaccgagttacgtcttacaagggtgtacactgggccttggctgtactttcctgcaaactggttcccgaaattaaagaaagccgtcttgtgggatttgcagcaagtgaagcaaatatttatacaggagggagctctggccaacctgcattatcttcacatcgatagcctcatggaactacgtgacatccctgtcggtattgagtttctcagttcagtgaaagaggcatattttaccaggatgcattctgattttgtaaggaatttacgaacaggaaagataagccatatcccgaaggtccactggtcaacacaaggggtgtccacggatctcactggacttgctaatctgcctggagcatccaacatgaccaacacaaacccagaatggcgcatcttaggtggatcaggctgggttttcatctaa</cdnaseq>

Protein Sequence

<aaseq>MAEIIVLFVIKKIGIAVAGETLKLAKPLLANKTELKKAELVTAL PVNMKLIKDELEVINAFLKELGMNGCKGEVVETWVRQVRRLAHDMEDVVDEFMYVIGK NKERESRAYVKKIIKKPKPLFSLDEIATKADRINRQLMELSKRLGRWTQPILSGGSIP ATKYDTEQQQLYLPGHDYSITDAELVGIDKNRQTLIESLCLEDCSLRIIAVWGMGGLG KSTLVNNVYKKEATVSNFNYRAWLSISQSCRVLDIWRNMLKELCGKESREFDAENMSS TELKVELTKILDQKRYLIILDDVWLATDFLKIREVLVDNGLGSRVIITTRIEEVASIA ENGCKISLEPLDNHDAWLLFCRKAFPKIEDHICPPELEQCGMDIIDKCDGLPLALVAI GSLLSFKSKNNKDWRLFYNQLISEVHNNENLNRVEKILNLSYKHLPNHLKYCFLYCAM FPEDYLIHRKRLIRLWISEGFIEQKGACSLEDVAEGYLAELVQRSMLQVVACNSFDRV QCLRMHDIVRELAIFQLKKESFCTIYDDTHGVAQVGLDSRRVSVLRCNNDIRSSIDPS RLHTFIAFDTTMALSSWSSFIFSESKYLNVLDLSGLPIETIPYSVGELFNLRFLCLND TNVKEFPKSVTKLSNLQTLSLERTQLLNFPRGFSNLKKLRHLLVWKLVDATYKSLNNW ESMEPFEGLWDLKELHYLNEVRATKAFVSNLGNLSQLRSLCITYVRSSHCVQLCNSLS KMQHLTRLNIRARNEDELLLLDDFTLSNPLEKLELVGQLSEGTLESPFFSIHGYKLLQ IELSWCKLTVNPVARLAEFSDLTELRLTRVYTGPWLYFPANWFPKLKKAVLWDLQQVK QIFIQEGALANLHYLHIDSLMELRDIPVGIEFLSSVKEAYFTRMHSDFVRNLRTGKIS HIPKVHWSTQGVSTDLTGLANLPGASNMTNTNPEWRILGGSGWVFI</aaseq>

Gene Sequence

<dnaseqindica>5112..5221#1977..4749#gtccgcaaatatgtcttctcgtctttcccccttctcctgtagcggcgatcaccgcctcaccggcgaacgggaagatgacgcggggggtaccctggccttcgccgtggcagaagctagcggcggcggcggcggcggtggccgccgcaaccgtcgagatgtgggcgccgccgtcaccgggctttccgctctcgtgcgctcaatctccggtgctgcacgtgagctgttcgatgtaatggccgtgtgatgcgccgacaagcaccgtcgccggaggtcacctcctcctcctctttctgatggaatattcgccatcgcgcctgtctagaagaaggtatatctcgatttctttgacttaagcaaacccggtaaaagaaaatccattggatggagaaaatcaagtaaaagggtcaacttgcaagttgcaaacaacacatccttcagcttactgattattcaagctcatttctttcctaacttagttgcttcagtcggtgtatcaatatgtccacattttgactgtttcttcatgccggaagtactcctatgctgcataagagacttcaccatttctttagtgaaaggaaattcagttattaaatcacccccccccccccccccaatggctctgatgccctcctttctatatctatgcgtataattgttgtccctagtgcaagatgcacctactggataacacattaacactgttcatgctacctctataccagtttaaaaaggagaactccaaaaaatattgcttccgtgagaatttatagtaggcctgcaaattggttaatgtacaaccatgatattttgccttcttgaaaactaatagactataaaacgaaaattgtaaactaagccagacaaaaagctgtcatagttcatgtatttgaatggaccaagtcataaatctgtctccacattggctgcgcaatttctttgaaaatatttgagccgcattgggtgtatagttcccattcaaattaatatgagtcacactgaatgtgtaattttcatccaaaaaaaatgattatgtaattatttaacctcatgtgtttaggaaacgtgtatgagtaactaaggaattaggatgacactttctactttctaggagtcaactagtcaagtcaactggacctttggtcttagatttcgtgttgatgaatgatgatgtatctctatagtaatagaagaaaaattctccagcctttgagtttaaaaaggagaaggccactgcctcactagtgcagtagtgcttctgtatttttgccttccctcaaccttcccattctgcacacttgggaactctaaatatttattcacaccagcaggatgatgaagagagtctgatgaaatgtgtaaagttgcaagctctcttcacctttagctccttcacttgtctcggagaaatacgttaaccaatttacaatgtaagtatgatacagttacatgtgatttcttcactagtttgttaagggaaaaaaagataacttggaaatttagtatgttgcttttctttaatatactatcattttcccaatttgaaaaacagttcaattgttttgccggtacttttatctttaactgacacaattcctccatttcccaccccttcgtaaatcactatgacagataaaggagcaacatggctatggataccatccacttcggtctttattaatgatccatctttatctccagcaagttcctttgatccaagcataaggtgcatttaaaaaaaaatcagcaacactgcaggtatttcagcaacaatcttgttagcagatgtgaattgtataaattagccctttaaccactacatatttgctcattagttaggatttcctgtttgataaaagagtttcttttttccccatagatttgatatacaagaattggattggtacagaagatcgatctttgattattacaactatacttcactgaaatactgaagtcaaaccgcacaaagagaaatggcagaaattatcgttctttttgtcataaaaaagataggaatagctgtggcaggtgaaacactgaagctagctaaacccttgcttgcaaacaaaaccgagttaaagaaagctgagctagtaacagcacttccagttaacatgaaactgataaaagatgaacttgaggttatcaatgcatttctgaaggaacttggcatgaatggatgcaaaggtgaagttgtagaaacttgggtaaggcaagtacggaggttggcgcatgatatggaagatgttgtggatgagtttatgtatgttattggcaaaaacaaagagagagagtcacgagcttatgtgaagaaaattatcaagaaacctaaacctttattttcacttgatgaaattgctactaaagcagataggataaacagacagcttatggagctttctaaaagactaggacgttggacccaaccgatattgagtgggggtagtattcctgcaacaaaatatgacactgaacaacaacagttgtatctacctggacatgattattcaattactgatgctgagcttgtaggaattgataaaaatagacaaaccttgattgaatcattgtgtttggaagattgttctcttcggatcattgctgtctggggcatgggtggccttgggaaaagcactcttgtcaacaatgtctacaaaaaagaagcaacagtatccaatttcaattaccgtgcatggctttctatctctcagtcatgtagagtacttgatatttggcgaaacatgctgaaagagctctgtggaaaagaaagcagagagtttgatgctgaaaatatgagcagtacagaactaaaagtggaattaactaaaattctggatcaaaagcggtacttgatcatattggatgatgtctggttggctacagattttttaaagattagagaggttcttgttgataatggcctaggaagcagagtaataatcacaacaagaattgaggaagttgcttccatagctgagaatggttgtaagatcagtttagagcctctagataaccatgatgcatggcttctcttctgtaggaaagcatttccaaaaattgaagatcatatatgccctccagaattagagcagtgtggtatggacattatcgataaatgtgacggtttgcctttagctcttgtggcaatagggagtttattgtccttcaaatcaaagaataataaagattggaggcttttctacaatcaacttatttcagaggtacacaataatgagaacttaaaccgggtggagaaaattctaaatctaagctacaagcacctgccaaaccatctgaagtattgtttcttatattgtgctatgttcccagaagattatctgattcacagaaagagattaattagactgtggatcagtgaaggatttatagaacaaaaaggagcatgcagcttagaagatgtcgctgaaggttacctagcagagcttgtccaacgaagcatgcttcaagttgtagcatgtaacagttttgatagggttcagtgtcttcgaatgcatgacattgtgcgtgaattagccattttccaattgaagaaagaaagtttctgtacaatttatgatgacactcatggagtggcacaagtgggattagactctcgtcgtgtctcggtgcttcgatgcaacaatgatattagatcaagcatagatccatccaggcttcacaccttcatagcatttgacaccaccatggcattatcttcatggtcttctttcattttctcagaatctaagtaccttaatgtattagacttgtcaggcttgcctattgagactattccatattcagttggggagctgtttaaccttcggtttttgtgtctcaacgacaccaatgtgaaggaattcccaaaatctgttacgaagcttagcaatttacaaacattgagccttgaacgtacccagttgttgaatttcccacgagggttttcaaatctaaagaaattgcgccatctgcttgtttggaagttagtagatgctacatacaaaagtctgaataactgggaatctatggagccatttgagggcttgtgggacttgaaggaattgcattatttgaatgaggttcgtgcaactaaagcctttgtttcaaatctaggaaatttatcccagctgaggagcctctgcattacttatgtaaggagtagtcactgtgtgcaattgtgcaactctttatcaaagatgcaacatctcacaagattaaacataagagcacgcaatgaagatgagctgctcttgctggatgatttcacattgtcaaaccctctcgaaaagcttgaactggtaggccagttgtcagaaggaaccttggaatctccctttttctctattcatggatataaactcctgcaaattgaactttcatggtgtaagctcacagtgaatccagtggcccgccttgcagagttctcggatttaaccgagttacgtcttacaagggtgtacactgggccttggctgtactttcctgcaaactggttcccgaaattaaagaaagccgtcttgtgggatttgcagcaagtgaagcaaatatttatacaggagggagctctggccaacctgcattatcttcacatcgatagcctcatggaactacgtgacatccctgtcggtattgagtttctcagttcagtgaaagaggcatattttaccaggatgcattctgattttgtaaggaatttacgaacaggaaagataagccatatcccgaaggtccactggtcaacacaaggtgagttttgatcactctctcaacccatacattgcttagatttcgcatgtcttccacaatgttaaccagttacaaacataacctgtttataactgaaaattactcacctgcaagtagttttgtgcgcaatcatgaattcactttgtaagtaagcataacaaatactccctccgtcccaaaatataaacatttttagctatgaatctggacaactgtgtgtccagattcgtagccaaaagttgttatattttgggacggaggtagtacatttttattgacacgaagtgtacagataccagagttttgcatccaagatcgtgtgcatcttcatagtatgcttcatttttgtacataaattgcaggggtgtccacggatctcactggacttgctaatctgcctggagcatccaacatgaccaacacaaacccagaatggcgcatcttaggtggatcaggctgggttttcatctaatccaatttgcggagctaggttgctggttcgacacttcgacctgacaacagtgcataaccatttccctctgctgcaatgtttgtgtacacctggttcactgaagtaaacactggagctgaatcggtgctgcacttccactctgatttagtatttggaagcaaagctttctggtaagctatgtctccatcaccatcctttctttctcttggcacaacagaacagtgtcagattctctgcaatttttgaagtaacttgaagagccagtggcattttgtcattccgtggccatgtatactgaaagctgctcctccattgtcagagcaactcagaaacttctttctgcgaccacgccttgtttcctccactggatggtagcatcaagaattccagatgattgttgcaagaagagatcacgctacctgctgcatgccgatttacaggaagataactactaaatagaagattgatacattcagaaaattatcgtgttattatcccatatttagcattgcaaataacgttctcgctcttttttttttcgctccgaccattttctggtcaagatgattatgcgagacgaagtgtagcgtccgaaatggactacccatatttgtagatgcatcagtctatcaccattcactcaccaaaatgaactgaaccatttggtgtttatctgaaataatttacgtagctggtcatgtttggactgtacgtcaaatcaaaatattacaatggctgatatttgctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0479500, RefSeq:Os09g0479500