Os09g0479600

From RiceWiki
Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0479600| Description = Conserved hypothetical protein| Version = NM_001070016.1 GI:115479774 GeneID:4347382| Length = 2055 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0479600

Description

Conserved hypothetical protein

Version

NM_001070016.1 GI:115479774 GeneID:4347382

Length

2055 bp

Definition

Oryza sativa Japonica Group Os09g0479600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19055921..19057975

Sequence Coding Region

19056407..19056497,19056801..19057975

Expression

GEO Profiles:Os09g0479600

Genome Context

<gbrowseImage1> name=NC_008402:19055921..19057975 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19055921..19057975 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tatgatgacactcatggggtggtacaagtgggatcagactctcgccgcgtctctgtgctccaatgcaacagtgaaattcgatcaactgtagatccatccaggctacgtaccttcctagcatttgacactagcatggcattatcttcagcttcttatttcattttctcagaatccaagtaccttgctgtgttagaattatccggcttgcctatcgagaccattccatattcagttggggagctatttaaccttcggtatttatgcctcaatgataccaatgtgaaagaattcccaaaatctattacaaagcttctcaatttacaaacattgagtcttgaacgtacacaattgctgaattttccgagagggttttcaaatctgaaaaaattgcgtcatttacttgtttggaaattagttgatgctacatacaaaagtctgaataattgggaatctttggagccatttgagggcttgtggaacttgaaggaattgcaatctttatgtgaagttcgtgcaactagagactttgtttccaaattaggaaatctatcccagctgaggagcctttgcattacttatgtaaggagtagccactgtgcacaactgtgcaactctttatcaaagatgcaacatctcacaagattacatataagagcaatgaatgaagatgaagtgctcctgctggatgatttgatgttgccgaaccctcttgagaagctcgatttgctaggacaattgtcaaaaggaactttagaatctccttttttcactactcatggaaatgaacttctgcaattggaactatcgaggtgtcagcttacagtgaatcttgtagcatggctctctaagttgtcaaatttaacagagttacgtcttacaagggtgtacactggacaacagctaagctttcatgcaaattgcttcccaaatttgaagaaagcactcctgtgggatttgcagcaagtcaatcaaatatatatacaggagggagctttgtccagcctgcagtatctccacattgatagcctcatggaacttcgggatgtgcccaccggcattgaatttctaagatcagtcaaagaggcatattttactatgatgcattctgatttcgtaaggaaccttcgaacaggaaaggtaaatcatatcccgaaggtctactggtcaacacaaggggtgtctgcggaacctgctaacctgcctggagaatccagcaccaacccacaatggcgcatgttaggagggtcaggttgggttttcatctaa</cdnaseq>

Protein Sequence

<aaseq>YDDTHGVVQVGSDSRRVSVLQCNSEIRSTVDPSRLRTFLAFDTS MALSSASYFIFSESKYLAVLELSGLPIETIPYSVGELFNLRYLCLNDTNVKEFPKSIT KLLNLQTLSLERTQLLNFPRGFSNLKKLRHLLVWKLVDATYKSLNNWESLEPFEGLWN LKELQSLCEVRATRDFVSKLGNLSQLRSLCITYVRSSHCAQLCNSLSKMQHLTRLHIR AMNEDEVLLLDDLMLPNPLEKLDLLGQLSKGTLESPFFTTHGNELLQLELSRCQLTVN LVAWLSKLSNLTELRLTRVYTGQQLSFHANCFPNLKKALLWDLQQVNQIYIQEGALSS LQYLHIDSLMELRDVPTGIEFLRSVKEAYFTMMHSDFVRNLRTGKVNHIPKVYWSTQG VSAEPANLPGESSTNPQWRMLGGSGWVFI</aaseq>

Gene Sequence

<dnaseqindica>1479..1569#1..1175#tatgatgacactcatggggtggtacaagtgggatcagactctcgccgcgtctctgtgctccaatgcaacagtgaaattcgatcaactgtagatccatccaggctacgtaccttcctagcatttgacactagcatggcattatcttcagcttcttatttcattttctcagaatccaagtaccttgctgtgttagaattatccggcttgcctatcgagaccattccatattcagttggggagctatttaaccttcggtatttatgcctcaatgataccaatgtgaaagaattcccaaaatctattacaaagcttctcaatttacaaacattgagtcttgaacgtacacaattgctgaattttccgagagggttttcaaatctgaaaaaattgcgtcatttacttgtttggaaattagttgatgctacatacaaaagtctgaataattgggaatctttggagccatttgagggcttgtggaacttgaaggaattgcaatctttatgtgaagttcgtgcaactagagactttgtttccaaattaggaaatctatcccagctgaggagcctttgcattacttatgtaaggagtagccactgtgcacaactgtgcaactctttatcaaagatgcaacatctcacaagattacatataagagcaatgaatgaagatgaagtgctcctgctggatgatttgatgttgccgaaccctcttgagaagctcgatttgctaggacaattgtcaaaaggaactttagaatctccttttttcactactcatggaaatgaacttctgcaattggaactatcgaggtgtcagcttacagtgaatcttgtagcatggctctctaagttgtcaaatttaacagagttacgtcttacaagggtgtacactggacaacagctaagctttcatgcaaattgcttcccaaatttgaagaaagcactcctgtgggatttgcagcaagtcaatcaaatatatatacaggagggagctttgtccagcctgcagtatctccacattgatagcctcatggaacttcgggatgtgcccaccggcattgaatttctaagatcagtcaaagaggcatattttactatgatgcattctgatttcgtaaggaaccttcgaacaggaaaggtaaatcatatcccgaaggtctactggtcaacacaaggcaagtttcaatcacctgtcagtcaatagattatggtcacactttacttttttttcctgcaatgttgtcaatcacctttgtacaagtgaaatttacgtacctgcaaatggattgagtgcaaccatcaatctactttctgacacagtttttgcgcaattttctgtatataagaaaggatcaaaatacttcaccataggccacttcgcattcgagattatgtgcatctctatttataactccttttttacataaaatgcctttgttcgaaaaatgtttcatgcacatgttctacataaaatgcaggggtgtctgcggaacctgctaacctgcctggagaatccagcaccaacccacaatggcgcatgttaggagggtcaggttgggttttcatctaacccagtttgcagaggatcctggttggttcactgtgacaaaaacttcagaatctactcccgttactgaaacggtgttcatctttggctcactgaattggagattgtgaatcgatagtgtacattccctccggtttctttgcgaatggagcttttggcaaggtacttggtcaccatcttttgtttctggtgccacaacaaaatactggcaagtggcaacttctctacattatttcactgggaaggtaactataatgtcaattgggatttatcacggtaaacttcatgaggaacaattttcctccatgggcatcttgaccagaagcagctcccctcagtccccttttgtcagaactctcagaaacaatgttccagcgttcactggatttgcagctgctacctgactagaagtctagaacctgaagatcatactacctccatatggatctagaggaggataactaagcaatatatattctgaaaaatgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0479600, RefSeq:Os09g0479600