BGIOSGA018654

From RiceWiki
Revision as of 16:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018654

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018654, complete gene.

LocusTag

OS05G0194500

Ensembl Transcript ID

BGIOSGA018654-TA

Ensembl Protein ID

BGIOSGA018654-PA

Length

6126

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6001968..6008093

Sequence Coding Region

6007835..6008093,6005424..6005566),complement(6005093..6005273,6003147..6003649),complement(6002645..6002819
,6001968..6002029

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6001968..6008093 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6001968..6008093 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCGCGCGCCTCCAACCTCACCGGCGTGGAGATCTACTCGCTGGTGGAGATGAAGTGGAAGGAGAGGAGCGGCACGGCGAAGACGGCGAAGATGGCGAAGCGACGCGGCGGTTGGGAAAACGACGCGACGAGGATGGCGGCGGGCGAGCAGGAGCGGCAGGCCTCGCAGGTGCTTGGTGAGGGTGCTCGTCGGCATCCCGGTCTTGATCCAGATCTCCGTCTGCGAGGCAGCGAGGACGTTGTCCAGGAGGACTGGTCGATCCAAGCAAGAATGAGCAGCGACGGCGCCTCTGGAAGCATTGGAATGAAGCACGACGACGGCGATCACCGGCCGATCACCGGAGCGTCGTCGCGGCGGTGCCCCAGCTGCGGCCACGACCCTGACTGCAACAAGCCGTTCGACATGGTTGGGATGCCTGCCGGCGTCAGGTTCGATCCGACGGACCAGGAGCTGATTGAGCACCTGGAGGCCAAGGTGAAGGATGGCGGCTCAACATCGCACCCTCTCATCGATGAGTTCATACACACCATTCAAGGAGAAGATGGCATCTGCTACACACATCCTGAGAACCTGCCCGGTGTGACAAGGGATGGCCTGAGCAAGCACTTCTTCCACCGGTCAGCCAAGGCCTACCCCACTGGCACAAGGAAGCGGAGGAAGGTCCTGGCTGATCAGCAGCCTGACGACCATCCACAGGCCAGCAAGGGCAGAAATGTCGCGGCGGCGGAGACACGGTGGCACAAGACCGGCAAGACGCGGGAGATCACGGTGCGCGGCCAGCCCAAGGGCTGCAAGAAGATCCTGGTGCTCTACACCAGCTTCGGCAAGAAGCGCAAGGCGGAGAAGACCAGCTGGGTGATGCACCAGTACCACCTCGGCGAGCTGGACGACGAGAAGGAAGGGGAGCTCATCCTCTCCAAGGTCTTCTACCAGACGCAGACGCGGAGCGCCGCCGCAGCAGAGGCACCGGTAAGCTCGGGTGCTGCCATGGAGGTGCAGGGACAGCAGCAGCAAGTGCTGAAGCTGCAGGCTGATGATGGTCACTTCAGCTCAGCTCCTACCAAGAAGAGACTGCATCAGGATGTTGTAGCACAAGTGAAAGTTGATCGGGGTCACCACTGCATGCCAGCACAACGCCACGTCAACTTCAATTTGAAAGTAACTCCTGTGCCCACCACCAGTTCATTCCCTGTCGTTGTCGACAAACAGTTGTATTCTCCTGTGGCGCTATTCCGAAGTGAACATCTTCATGTAGGGAAGAACTTCAATTCATCAGCCCCAAAAAGCAGATTGGCCTCACCAGCGCTGGCCTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MTPRASNLTGVEIYSLVEMKWKERSGTAKTAKMAKRRGGWENDATRMAAGEQERQASQVLGEGARRHPGLDPDLRLRGSEDVVQEDWSIQARMSSDGASGSIGMKHDDGDHRPITGASSRRCPSCGHDPDCNKPFDMVGMPAGVRFDPTDQELIEHLEAKVKDGGSTSHPLIDEFIHTIQGEDGICYTHPENLPGVTRDGLSKHFFHRSAKAYPTGTRKRRKVLADQQPDDHPQASKGRNVAAAETRWHKTGKTREITVRGQPKGCKKILVLYTSFGKKRKAEKTSWVMHQYHLGELDDEKEGELILSKVFYQTQTRSAAAAEAPVSSGAAMEVQGQQQQVLKLQADDGHFSSAPTKKRLHQDVVAQVKVDRGHHCMPAQRHVNFNLKVTPVPTTSSFPVVVDKQLYSPVALFRSEHLHVGKNFNSSAPKSRLASPALAS</aaseq>

Gene Sequence

<dnaseqindica>1..259#2528..2670#2821..3001#4445..4947#5275..5449#6065..6126#ATGACGCCGCGCGCCTCCAACCTCACCGGCGTGGAGATCTACTCGCTGGTGGAGATGAAGTGGAAGGAGAGGAGCGGCACGGCGAAGACGGCGAAGATGGCGAAGCGACGCGGCGGTTGGGAAAACGACGCGACGAGGATGGCGGCGGGCGAGCAGGAGCGGCAGGCCTCGCAGGTGCTTGGTGAGGGTGCTCGTCGGCATCCCGGTCTTGATCCAGATCTCCGTCTGCGAGGCAGCGAGGACGTTGTCCAGGAGGACTGTCGTCGGCGGCGGCGGCACCGCCGCGACGCTAGGTCTAGCGGGCTGCCTCGCCTCGCCGCCACCGCCAAGCCGACGAGCTCGCCGCCTCCCCGCGCCTCCGCCGGCTGCGCGTGTGGCTCCAGCTCCGCCGCCGCGCCAGAGAGAAGAAGAGAGAGAGAGAGAAGAGGAAGGGAGAGAAGAGGGGAAAGAAAGAGGAGGCTAACCTGGACAGGCTGACATGTGGGGTCCACGTGGGCCACGTAGGATAAAATCGGGATCAAAACCGCAGAGGGACATGTTGTGACCGGTTTTGTTTAGTTAAGGGACCCCGCATATCTGGTTTTGCTGATCGAAGATGTTTTTTTATCCCGATGACAAGTTGAGGGACCTTCGGTGTACTTTTTCCTATATCAAACTATCAATTCTGGCCCATCCTAGGATCTTATGAGGCCCATCCCAATAAGGCCTTAATTTTTTCTTTTCCCAATGTACATACAAGCAGCCATGCAAATCGCATTGAATGAAAACCACTTTGGGCATGTAGGGATGTACGGTATGTATGTACACGGTGCGAACGCGTTAACAGGGGAGCGCGTTAACAGGAGAGCGTCTAGTATTTTAATACTTTATTTTGATTTTCGTGGGAGGTGACGTGGGCGCTTACCGTGCAGCAGCTTGTAGGGGAAGCCAATCAAAGCCAGCTAGGAAGTAGGACCTCTGCCAGATGGGGCCCACCAGCTGTCCGGGGATAGATTGGTTTGCAAGGAAGCTCCCGTGCCCATATAGCGGAAGAAAGCACTATTCTCTTCTTGTGCCACACCCTTCAAAAAGTGCTCTCTCAAATTTAACTCCCTCCCCAATTTCTTCTCCATCTCTTTAGATCTCTCCCCTCTTCGATCAAATTAAGCCTCTCAGTCTCATCAGATCGAGCTCAACCAAGGTTGGTTTATTGGTTTGGTTATTAGTTGGCCATCGATGATTAGTTTCAGTTCCCCTTCTCTCCTGCTGCTTGCTGTGATTAATTAATTTGCTTCATCCACGTCTTGATCGATGTGTAATGTCCGTGCTGCCATAGTGCCATGCCATGTCTCTTGTATGTGTGTGTGTGTTTGAATCGCATTTTGAATTTCATTTGCGCGCCTTTTAATCCCTCCCAGATCTTGCTGATAAGAAGCGGTTTTTCCTTTCGTTCTTTTTTTATTTTTTTCCTGATTGTTGCATGCGCTCTCCGTATAAAAAAAGAATTGAGGATACGATATAACCTAGTGTGTCCAAATTCGTTATGTTAGGTTGTGTCTCTTCCTTAATTTAGGTATTTCTTAGATAGAGGGAGTAGATTGTACTCTCTGTCAAAAAAGCCAAGTTAGGAGGGGATGCGATCCCTTCTAATATAACAAATTTGGACAGTTTTATGACTCTTTTGGGTTTTTTTTTTGACGGAGGCAGTAGTAGTTTATAAAGTTTAAGGTCCTTATTTTTTTCTTATACTTGCTTATAAGTTAAAATTTAAATTTTTGACTTTAAATTTGGGATTAATTTTAGGGTGTTTTCATCGAAGTTTATTTTCCAGTCTTTACTTTTAGATCGCTAAAAACACGTATAGAAAATTTTTATTTATAAATTATTTTTCGTTTGTAAATATGTCATTTCTGGGTCCGTAATTCTTCGATAAATAAATGTTGCTTTCTTGCGAAGCAATAAATCTTTTGTACTGTAACGCACGCTAGCGGCCAGTTCGGAATTTAGGCAGTGAACAGGTCCATTAGTCACGAATTTTTAGCATATGTTTAAGTTTGTTAACTGAATTCGAACCATTTTTACACTCCATAACATTATAAATTTTAATTTCGATTTAGTACCATAGAGGTGATTGTCAGAGAGAGAGATACATGAGATGGAGCGCATCTGCGCATGCACCTGAGCCATAGGGATGCAGGTAGGCCAGGGTTCAAAATTAAACTTTGATTTGGCCCTCTCTTTTGGGGCACGAAGATAATTTGAAATTTGAACAAACTTTGGTCAATTTTTTTTCTAAAAAAATTGCTAACATTTACAAAAGATGAAAGATTCTGAAATTTTCATTCCAAAATTTTCAACCCTTAAGTGGGCCAGTCCACTATACCTGATGACCTGCTGACGGTTTCCCTTAACTCGTGAGTTGCACGAACTAATTGAATTCCGCCCTCTCTGGTGTATATAAATGGATCCAAGCAATAATCAACCTGATTTATCATTTCACATTTTTACTACTAACTAATACACGATCCACGTATATGAATGGGCGCAGGGTCGATCCAAGCAAGAATGAGCAGCGACGGCGCCTCTGGAAGCATTGGAATGAAGCACGACGACGGCGATCACCGGCCGATCACCGGAGCGTCGTCGCGGCGGTGCCCCAGCTGCGGCCACGACCCTGACTGCAACAAGCCGGTAGGTGCACGCATGCATTGCTACAATCAATTAACCAACATGAGGCTTGTGATTGTTTGTTCTTGATTACTGCAATAATGGATTCGATCGACCTCTCTTCGATCTGATGTTAGTTAATTAGTTAATTACTGTATCAAATGCATTTTGCAGTTCGACATGGTTGGGATGCCTGCCGGCGTCAGGTTCGATCCGACGGACCAGGAGCTGATTGAGCACCTGGAGGCCAAGGTGAAGGATGGCGGCTCAACATCGCACCCTCTCATCGATGAGTTCATACACACCATTCAAGGAGAAGATGGCATCTGCTACACACATCCTGAGAACCTGCCCGGTTTGTGAAATCTCGATCACATATATCATTTTGGTGTGCTGCGTGTTTAATTTTGTTTCCTTAAGATGGCAAAGTCAACTTGAATTTGACTTTATAATGGAAGCTGCATGGTAGCCTGGTTGGATAGCTGTAAAAATGTTATGTCGGCATGGAGTAATCCAAATGTGTTTAGATCACAGCTATATGGAGTATGTCGGTATGGTAGGAGAAGTCAAAAGAAAGTTGATTAGTTCGATTCAGTGTACTTCATAACATAGCTAGTGAGAGAAACTTTTGGATATTATGTTAACTATTAATGAGCTGTATTGTGAATGTCGGTTTGTGATTTAGTCGGTTAGCATTAGGCTCTAAATATGAATGTAAAGGTAACCTTATCGACCAGATTAATTAAAAGATAGTACTATATTTTCCAGCTCCAGTGTTATTTGCATGTGTGAATTCTCTCCTAGGATATAGCCAACCAGCATAGTGATACAACATTTATATATTGTCGAATTGAAACCCTTTTCCTAACTATTTAGATTGCATGCATTTACTAAACAAGGCACGCCAACTTATGTTGATAAATTTCCCTTTCAAGATTGTTGTGCATAGAGATACCAACTGCCTATATAGGCCTTGGCTGTGCATAGAGATACCAACTGCCTATATATGCAAGATTGTTGTCCCTGAATATTTTTAGTTTTTGTTTTTAATCACCTATCTCTCATCATGGTGGGAATTTGGTCCTTCTAAAAATTTCCAAATTGTTAGTAAGGCTTCACTCTTTAATTTCCTGATCAGATGAACTGCCACTCATCATTCTAATACATGAATCTCGACGTACTCCAAACAGAGCAAATATAGTAGCTGGCGTTGACACCACCAAATTTACAAAATCATGACTATAGTTAATGCGGCCATGTAAACATGTCGTTTCAGACTTGTTTCAAGCCCAACTTCAAAAACTTTGCACAGCATTGGATTGGATATATGAAGAGAACACATATGTATATAATATATATTAACATTGAAAAGTATATCGTCATGAAAAGTGTTCTTTTCTCGTGAAGATGTAGATGAAGATAAAGATTAAGTTTTTTTTTACGTAAAACGAGGTGGTATTAACGTATGATTGATTAAGTTTTAATTATTATAAATTTAAAAAATAGATTAATATGATATTTTAGAGAAACTTTCATTTAGAAAGTTTTCGTACAAAACACACCGTTTAGCAGTTTGAAAAGCGTGCCACAAAAATTTTAATCTTCATCCAACTCTTATTGGAGAAAAGAACGGATGGTCTAGCTATAATTCGCAGGGTTTTCCAAATGTTCTAGCTACCATTGAAACTAGTGATCAAAACTACATATCGAAGGCTTTGTCGATGTCTAAAACAATAGTATATTATGTTTTTGTGACTGGAGTACTGGAGTAACTTGTATCTGTGATCACCAAAAACAGGTGTGACAAGGGATGGCCTGAGCAAGCACTTCTTCCACCGGTCAGCCAAGGCCTACCCCACTGGCACAAGGAAGCGGAGGAAGGTCCTGGCTGATCAGCAGCCTGACGACCATCCACAGGCCAGCAAGGGCAGAAATGTCGCGGCGGCGGAGACACGGTGGCACAAGACCGGCAAGACGCGGGAGATCACGGTGCGCGGCCAGCCCAAGGGCTGCAAGAAGATCCTGGTGCTCTACACCAGCTTCGGCAAGAAGCGCAAGGCGGAGAAGACCAGCTGGGTGATGCACCAGTACCACCTCGGCGAGCTGGACGACGAGAAGGAAGGGGAGCTCATCCTCTCCAAGGTCTTCTACCAGACGCAGACGCGGAGCGCCGCCGCAGCAGAGGCACCGGTAAGCTCGGGTGCTGCCATGGAGGTGCAGGGACAGCAGCAGCAAGTGCTGAAGCTGCAGGCTGATGATGGTCACTTCAGCTCAGCTCCTACCAAGAAGAGACTGCATCAGGTAACTTAGCTACTGTTTTATCTGTCAAGAGTTGAATTTGGCTGTGTTTAGTTCATACTGAAGTTTGTAAGTTTGGTTGAAATTGGAACGATGTGACTGAAAAATTGTGTGTGTATGAAAGGTTTGATGTGATGGAAAGTTGGAAGATTGGAAAAAAAAACTTTGAAACTAAACAGGGCCTTTGTTGTATTCATTAGTTTAGTTGAAGCTGGTACCTCTCCAATACTACTAGTCTTAGTCCACAAATTAATGCTGAAAATCTTTGTACATCCCCAAGAACTGTAAAATTATTCTCATGAATTAACTTCATCACACATGATACTGCAGGATGTTGTAGCACAAGTGAAAGTTGATCGGGGTCACCACTGCATGCCAGCACAACGCCACGTCAACTTCAATTTGAAAGTAACTCCTGTGCCCACCACCAGTTCATTCCCTGTCGTTGTCGACAAACAGTTGTATTCTCCTGTGGCGCTATTCCGAAGTGAACATCTTCATGTAGGTAATTCAGTTCATATGTTTCCTCGTTTACTGAAATTGAACATCTTTGTATTTGAAACTAACTCCTCAATTCCTGGCCTAATGGCCTTTGGTCCCTAAAAAAAACCTACTCCTGAAAAGATTTCTTTGCTGATACTAAAGTAAATAATGTGTTAAATTGCTGTTACATTGCCATTCCTTGCATATATATTACTATAAATGAAATGCTTTGAGATCAGATTTCCTTCCGATAGTTCAATTGCTGTTAACTTCTGTTTCCAAGTTCTTCACCTATATATCTTGGAAAGTTACCTGAACTTTTTAGGCAGCTTCTAGTTAGAAACTTGAGTACATCAATGCTCTGTTTACTTTGTTTTTGTCGTGCTCTGTTTCCATTGAAATGATGTTGTTTTACCTTTTAGGCCTTAACAAGTTCCAAACTTTTTTCTTCAAACTTCCAATTTTTCCGTCACATCAAACTTTCCTACACACACAAACTTCTAACTTTTCCGTCACATCATTCTAATTTCTTCAAACTTCTAATTTTGGCGTGGAACTAAACACAGCCTTAATCAGTTCAACATTACGACACTTCCATTTTACAAATTAAACCTTTTGACTTGTTTACATTCTACAGGGAAGAACTTCAATTCATCAGCCCCAAAAAGCAGATTGGCCTCACCAGCGCTGGCCTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018654