Os07g0637400

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Revision as of 08:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0637400| Description = Similar to Novel plant SNARE 12 (AtNPSN12)| Version = NM_001066937.1 GI:115473606 GeneID:4344040| Length = 2763 bp| ...")
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Gene Name

Os07g0637400

Description

Similar to Novel plant SNARE 12 (AtNPSN12)

Version

NM_001066937.1 GI:115473606 GeneID:4344040

Length

2763 bp

Definition

Oryza sativa Japonica Group Os07g0637400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27161622..27164384

Sequence Coding Region

27161746..27161822,27162039..27162131,27162371..27162464,27162559..27162596,27162736..27162827
,27162916..27162995,27163069..27163125,27163242..27163334,27163503..27163577
,27164004..27164105

Expression

GEO Profiles:Os07g0637400

Genome Context

<gbrowseImage1> name=NC_008400:27161622..27164384 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27161622..27164384 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcgacgtgcccatgagccccgagctggagcaggtggacggcgagatccaggacatcttccgcgcgctccagaatgggttccagaagatggacaagatcaaggactccaacaggcagtccaagcagctggaagatctcaccgggaagatgagggagtgcaagcgcttaatcaaagaatttgatcgtattctcaaagaggatgagaaaaagaactcggctgatgtcaacaagcagctaaatgataagaagcagctgatgatcaaagaattgaattcctatgtcacattgaggaaaacgtaccaaagcagcctgggtaataagaggattgaactatttgatactggtaatgatcaggtggccgaggacaacactgttcaaatggcatcagaaatgtcaaatcaacaactcatggatgccggaaggaaacagatggaccaaacagatcaagttattgagcgttcgaaaaaggttgttgcacaaaccgttgaagttggatctcaaactgctgcagctctatcacaacaaacagaacaaatgaagagaattggcaatgagctagactcggttcacttttcactgaagaaggctagccaaatggtgaaagagattggtcgccaggttgcaactgacaaatgcatcatggcattcctatttctgatagtctgtggtgtgattgcaatcattgttgttaagattgtcaaccctcacaacaagaacatcagagacatcccaggactggcaccacctgcgcagaacaggaagctcttgtccatagaatctttcggaagcctctga</cdnaseq>

Protein Sequence

<aaseq>MASDVPMSPELEQVDGEIQDIFRALQNGFQKMDKIKDSNRQSKQ LEDLTGKMRECKRLIKEFDRILKEDEKKNSADVNKQLNDKKQLMIKELNSYVTLRKTY QSSLGNKRIELFDTGNDQVAEDNTVQMASEMSNQQLMDAGRKQMDQTDQVIERSKKVV AQTVEVGSQTAAALSQQTEQMKRIGNELDSVHFSLKKASQMVKEIGRQVATDKCIMAF LFLIVCGVIAIIVVKIVNPHNKNIRDIPGLAPPAQNRKLLSIESFGSL</aaseq>

Gene Sequence

<dnaseqindica>125..201#418..510#750..843#938..975#1115..1206#1295..1374#1448..1504#1621..1713#1882..1956#2383..2484#gctcaccggaatgcggcggtgacgagacgaccaaccacctcctgcgactgctcggatctcgcgacgcggcggcggcggcgagatacggagatccggcagcttgaggcaagagagagagaaagccatggcgagcgacgtgcccatgagccccgagctggagcaggtggacggcgagatccaggacatcttccgcgcgctccagtgagtcagatctccccctcccccaccgccgcctcctcctcctcctcccccctccagcattccgcccctccctccaccggcttagtgggctgcgaagcttctcgaggcttctgcggcagcggcggcggcggtggctcagattttcgccactcgcccaatctgtgctcgaaattgttcgcggtttccgctgttgggttcactgcttttcgtttgcaggaatgggttccagaagatggacaagatcaaggactccaacaggcagtccaagcagctggaagatctcaccgggaagatgagggagtgcaagcggtaggtctccctgcctgcctgaacactactgtgtgctctggtgatgcacaggctcacgcctgaacccatggtttagtttagcttctccatctgtgcgccattgatgttcctggcttgaacaagcaatttagatctttttgcatgtggcgcatgagttctgcaactgctctgcctgttagatggagcactaatgtcttgatagatttgtgtaaatgtgatgatttggtgttttctcgcagcttaatcaaagaatttgatcgtattctcaaagaggatgagaaaaagaactcggctgatgtcaacaagcagctaaatgataagaagcagctgatggttggtagtactagttttcttcactagtgtttgtgttacccttactggacaatttagctcacaagtgtaatttgtttcttgtgtgttaaaacagatcaaagaattgaattcctatgtcacattgaggaaaacgtaagtagattttcccctttcgttatgcatgtgttattttttttccttatgttgaattcagcgtttcatttgcatatgtgatcctgttacattgtacatcacttgtggtaatagacatgcaactctcatggtgtttcaggtaccaaagcagcctgggtaataagaggattgaactatttgatactggtaatgatcaggtggccgaggacaacactgttcaaatggcatcaggtggttgtagtttcttatatcattgttaacctgcccctgagaggtaatgtgttcttattctaaccaaagcactttggtaattcttcagaaatgtcaaatcaacaactcatggatgccggaaggaaacagatggaccaaacagatcaagttattgagcgttcgaaaaaggtgcgctagtagattttgctttcatttctttacacacttcaagagcaaattttacaagaatcctttcttgtaggttgttgcacaaaccgttgaagttggatctcaaactgctgcagctctatcacaacaagtaagttttttgggatgataaaattcaacagaatattccttggacgtttcttgttagaaaggtcagtcctgataagtttaatccagcaccctaaaattctctttacatccttttagacagaacaaatgaagagaattggcaatgagctagactcggttcacttttcactgaagaaggctagccaaatggtgaaagagattggtcgccaggttctctctctctctctccccccctgcacacacgtatgttactcgtttcgtcccaaaataagtgcagccctctagttcaaatttgaactagaaggctgcactcattttgggacagatggagtatatttgaagtggctgtgcctagacttacaagattcattgctgcaggttgcaactgacaaatgcatcatggcattcctatttctgatagtctgtggtgtgattgcaatcattgttgttaaggtatgttttaattgcttttgcaaatgtacccatgttgtttaccttaggtgacatcacttgttgagataaaaactgatcctatatcctccgtatgtgcaagttcaactaaaagcccatgacctatggtgaaaatttctgtccagttaattgtagagccagttagtgcacctagctagtttctcgttaactctacgtgttctattatatgttggagataagaatgacgaataaaaggagcaggaatacatcatttggataataactagagctagtgatcagtcccacatttggtgtgttacgtcatgcaatgctatacttaactgattcagttccagaatgtcatagattgtttcatttgtcacattttacattacaagctagtcttacattactatgcaatgaatgaccggtctgccgttcttccagattgtcaaccctcacaacaagaacatcagagacatcccaggactggcaccacctgcgcagaacaggaagctcttgtccatagaatctttcggaagcctctgagcattgcgagtgggaggcaaccgagatgtttgggagaagatactatgcacgtcgtgacaattcttttgcgcttgtatatcatctcatgtcgttattcccttccactgatctattcttttcttgctgtaattggtcattagtgttggatttacgtttgatggttgcagtgcggcttcctgttggctttatgaatgtgtgtatatgtggtagtgatgaggatacaaagatatttgttgttctttttattctgcaagtaatcacgtgaaggcttcagtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0637400, RefSeq:Os07g0637400