Os07g0638000

From RiceWiki
Revision as of 08:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0638000| Description = Conserved hypothetical protein| Version = NM_001066940.1 GI:115473612 GeneID:4344043| Length = 2959 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0638000

Description

Conserved hypothetical protein

Version

NM_001066940.1 GI:115473612 GeneID:4344043

Length

2959 bp

Definition

Oryza sativa Japonica Group Os07g0638000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27188091..27191049

Sequence Coding Region

27188421..27188561,27188642..27188743,27188886..27188997,27189142..27189200,27189296..27189370
,27189471..27189569,27189844..27190080,27190163..27190237,27190320..27190407
,27190494..27190567

Expression

GEO Profiles:Os07g0638000

Genome Context

<gbrowseImage1> name=NC_008400:27188091..27191049 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27188091..27191049 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcattgtagatagcacatcaaaatgtgatgctacagagcaattgtgtccagggagatgccaattagaaaagaggttgaaagcggagattattgcacatcaggatgctagaagaaagattgaatgtctcacaatggaagctagttgtaaagatgaggaggtaaggcaatacaaagagcacatagctgagttggtcctgcattcagaagcacagtctttgctgtttcaggagaagtatcaggaaatggagcacatgatttctaaacagaagtttggtctacatgaatctaattctgatactggccataccaaattcgaaaagccttcaggacggactagaggatctggttcacctttccgatgcatatctagcattgttcaacagatgaactctgaaaaggatcaagaaatctcagtggcacgccagagaattgaagaactagaaggattggtttgtaataaacagaaagagatctgcatgctaacatcaagactggccgccgttgatagcatgacacatgatattataagggagttacttggtgtcaaattagacatgacaaactatgctaacatgcttgatcaggaagagttgcagaaattgctaatggcttcccagcaacaaattgaacagtcaaaggcaaaggatgtggaacttgacatgctaaaagaacaatttgatcatctcattcaagaaagagacagcttgtttgatgatatggaccaaagaaaggcggacttgttggagagccaactgctcatagaacagcttgagcaacgggagcaaatgcttgaagcccagaacggaattttacagatggagaaagataaccttcaacagaggatcatggaaatggacgaggaaatccaattgctagttggctcaaatcaagcgattgctgagacaacgttccaaatggggagcaaccatcgttccgccaacagtgaattcagcaggaggctggctcaatcggatatgcttctctcccacgcgagacatgagcattcacgcttgcaagctgctaaaagctccaggacgcgtcgtggtagtcatcaatga</cdnaseq>

Protein Sequence

<aaseq>MFIVDSTSKCDATEQLCPGRCQLEKRLKAEIIAHQDARRKIECL TMEASCKDEEVRQYKEHIAELVLHSEAQSLLFQEKYQEMEHMISKQKFGLHESNSDTG HTKFEKPSGRTRGSGSPFRCISSIVQQMNSEKDQEISVARQRIEELEGLVCNKQKEIC MLTSRLAAVDSMTHDIIRELLGVKLDMTNYANMLDQEELQKLLMASQQQIEQSKAKDV ELDMLKEQFDHLIQERDSLFDDMDQRKADLLESQLLIEQLEQREQMLEAQNGILQMEK DNLQQRIMEMDEEIQLLVGSNQAIAETTFQMGSNHRSANSEFSRRLAQSDMLLSHARH EHSRLQAAKSSRTRRGSHQ</aaseq>

Gene Sequence

<dnaseqindica>2489..2629#2307..2408#2053..2164#1850..1908#1680..1754#1481..1579#970..1206#813..887#643..730#483..556#agaggaagaggttaggattcttgaacgttctgtggaagaacttgaatctactataacagttctggaggaagaagtaagctgttcaatactctgctttctttggtgttttctcttcttcactaggctctctcttttgatgactagtcagttaggccttctattgtttgctaagttaaatcttcctttggatattgagtaaaaaaatcgagtttctaataaatgggtaccagaaaaggacatggataacagtaatatcagatagcacatcaaagaggaaagttatgctagatagcctggaattcaacatctccattgtaactatgtaaaggctaattcatgtgaatacatagttcgccaggttttaatggaaattatacatagcacatcacatattctctgtttaactgaaggtatgcaaccttaaagaggaagtgaggagctatcaaatatataaaaaatctgaagctgaacaagctcaagagatgttcattgtagatagcacatcaaaatgtgatgctacagagcaattgtgtccagggagatgccaattagaaaagtgagaattctcttcatctgatttttttatgagactgccatcgtatcctattttcaattgtttgtcaatttttactcttatggtaggaggttgaaagcggagattattgcacatcaggatgctagaagaaagattgaatgtctcacaatggaagctagttgtaaagatgaggaggtatatgctttaaatgtggcacaccattactttagttatgtctataaaaggtattcaaataccttctcttttgtgtacataggtaaggcaatacaaagagcacatagctgagttggtcctgcattcagaagcacagtctttgctgtttcaggagaaggtatgaaaccttcaactgttagtattgtcaatttcattatttctgtatttcgtcagaaatgcttataatttgggctttacagtatcaggaaatggagcacatgatttctaaacagaagtttggtctacatgaatctaattctgatactggccataccaaattcgaaaagccttcaggacggactagaggatctggttcacctttccgatgcatatctagcattgttcaacagatgaactctgaaaaggatcaagaaatctcagtggcacgccagagaattgaagaactagaaggattggtttgtaataaacagaaagaggtgactttattgtacttcaggccaattgaataactagaattttgtgactgaaattggatagaataagcaaataacattttgattaaattctagaaatagccatttcggtaaagattatctggggatcttttttttaaaaaaaaatgcctgggaaacaatggaaaataactgtcttttattccttctcctataaagtattacaattcattaccctgtgttaaaagaagtactccgtaccttatatcagctgcttatattttctcgttcttcatagatctgcatgctaacatcaagactggccgccgttgatagcatgacacatgatattataagggagttacttggtgtcaaattagacatgacaaactatgctgtaagttgcagtagtatattagtatctacacacagtattaggtcttattgtcaaccagttcactgatatagtgatatgtgatttcttcttctatacacagaacatgcttgatcaggaagagttgcagaaattgctaatggcttcccagcaacaaattgaacagtcaaaggcaaaggtaggccactatcaaattcttattttacacttctgatttttctggatcatttaataagacagaatttcctatcatcatgtgctttgtcaatctaggatgtggaacttgacatgctaaaagaacaatttgatcatctcattcaagaaagagacaggtgattcatatgtttcctgaagggatttatgtttacagcacgatgagcatttcatttcttggtctttctttgtcatttgatactgtttatcaattaaattattgaaaccatgcttacaccatgttggatactgtttccttatagcttgtttgatgatatggaccaaagaaaggcggacttgttggagagccaactgctcatagaacagcttgagcaacgggagcaaatgcttgaagcccagaacggaattttacaggttgagataatatctgcaactatttttttttcacacattatatctgcaacaatcacacaccatcacacaaatagcattctgctattggactattaaatacctgattacattcatattaaaccgttattctctgttattgtagatggagaaagataaccttcaacagaggatcatggaaatggacgaggaaatccaattgctagttggctcaaatcaagcgattgctgagacaacgttccaaatggtgaaacaactttcaaccatggcaaccatttccattattacaaatactatcattttgttcttacaaaatcacttcaacaggggagcaaccatcgttccgccaacagtgaattcagcaggaggctggctcaatcggatatgcttctctcccacgcgagacatgagcattcacgcttgcaagctgctaaaagctccaggacgcgtcgtggtagtcatcaatgaaggctggagcggaacatgaatcagatcagacacttcttgtgtctgcagcaccacctctctgacgctacaggcctacttttttctgaagatgtagggttaaaaatggtgatgactgcaagaaacattgtatatgaggtacatccatccagtgtatttatgatttgtgcagatttccgtcgtatgtacagtactaccgtacatggtagcaacggcttattgaaacttttctccaacgagtgagtcattgagggggtgtttggcccctttcacagaaccataagtctctaggggagggaattatacttttatgagagagaccaaagtttaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0638000, RefSeq:Os07g0638000