Os07g0642900

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Revision as of 08:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0642900| Description = Trimeric LpxA-like domain containing protein| Version = NM_001066974.1 GI:115473680 GeneID:4344079| Length = 3268 bp...")
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Gene Name

Os07g0642900

Description

Trimeric LpxA-like domain containing protein

Version

NM_001066974.1 GI:115473680 GeneID:4344079

Length

3268 bp

Definition

Oryza sativa Japonica Group Os07g0642900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27435567..27438834

Sequence Coding Region

27435818..27436102,27436568..27436719,27436966..27437091,27437927..27438070,27438638..27438752

Expression

GEO Profiles:Os07g0642900

Genome Context

<gbrowseImage1> name=NC_008400:27435567..27438834 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27435567..27438834 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcaggccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcagctgccaaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgtttttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatctggtatggctccattttaagaggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgtacatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgttacaataggtcacagtgctgttctacacgcatgcatcgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggtggttgaaaagcacagcatggttggtgcaggatcccttgtaaagcaaaacaccaggattccttctggagaggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagaggagatggcgttcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagccgagaatgccaagaccttcgatgagattgagctcgagaagatgctgaggaagaagtttgcgcacaaagacgaggagtacgattcgatgctcggcgtggtccgtgagatcccaccagagcttatcctcccggacagtatcctcccaaacaaggctcaaaaagctgttgctcactga</cdnaseq>

Protein Sequence

<aaseq>MGTLGRAIYTAGKWIRGTGQAMDRLGSTIQGGLRVDEQLPRHRT IMNIFEKEPRIHKDVFVAPSAAVIGDIEIGHGSSIWYGSILRGDVNSIHIGVGTNIQD NSLVHVSKANISGKVLPTIIGNSVTIGHSAVLHACIVEDEAFVGMGATLLDGVVVEKH SMVGAGSLVKQNTRIPSGEVWVGNPAKFLRKLTEEEMAFIAQSATNYINLAQVHAAEN AKTFDEIELEKMLRKKFAHKDEEYDSMLGVVREIPPELILPDSILPNKAQKAVAH</aaseq>

Gene Sequence

<dnaseqindica>2733..3017#2116..2267#1744..1869#765..908#83..197#acagttacctctcacctcggcggcgggcggcggccggcggcgaggtccggacagcggagggagcaagcggggaggacgaggcatggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcaggccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcagcgtaagcagcagcagccgccgtctctctctctgacaatttggcagttgttattgggaagaaattggtaggaatggatagggggtgactggattcgaggagtctcgaaatgagcctaaattatcgtcggttatttgtgaagttctgcattccaggttttcaactagtgatcgatctcgtgtgtgaaaactgcagcaagtaaatcaaggattgcgcatattggttattgcggtcatactgcccattgtgggagtgtcacattggcaatttggcatgccaattttcgagtggttatgcatctattttctgttgcgtagcatcatgaagaatgtcatttgttccaccttctagttaggtgtggtgctgtagttggtgttgattgatttccaccatgctgcatcttgtagagggccttgaattagcataaattggacattgtatcaaaaaggttttggtattatgtctagataggtcattttagaataaccacgagctaatgaatttagcaaggtacataaactttatggttgagcctgactatcatgttaccgttttgtatgcccttgtcagtgccaaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgtttttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatctggtatggctccattttaagaggtaaactcttggtcgatatacactgtagtattattacacatgtgagtaagcatgggctttgtcttgataatttgtttcccatttctttctttgttacaccttgtttactgtacatttttgtttttggaataaacttgcttctgactgcagtacactcattgttatgatgaatggtactacatagacaactgacagaaccaccagtcgtacggagatgcacagttttatcaaacagctctagtacactcatcttttcattgttgggctctcaactgacacttcacatgaagttcgagtttttaacctgcaacgatgatgtgttgggctctcaacgatgatgtgggaaggttctcccaaccataaagcattaagtactacttcctccgtttcatattataagactttctagtattgtccacattcatatattcattaatgaatctaaacatatatgtgtgtctagattcattaacatctatatgaatatgggcaatgctagaaagtcttataatatgaaacggagggagtaacatactagtagctcttaagaaaacaattaggtgagaatggttttgaccaatgcctgtatggtctcctttacaaccaaatccaagtagaaaaaggattcaagcagcttcattcacatgataacgttcctcctacaccatatgatcttttatcatggtgtgaggcatttgtgctgtcatacatactgggttaaccctagcatattgatatttaaagtttcagtaactatagtgttgaagttgtactttggatacttccacggtgcggtgataaccattttagctccttttcattcttttgtcctcaggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgtacatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgttacaataggtcagtagagcacttcctatcttaattcgtaatatacactctgatatgctattgaagttgtgatttggcttttctggaagacattaaccacatggcatcatttatacctgataaaatcgtaaaaatatggtttccattgctgctttgtgattgatttacgagttaaaattctgagcttcatttcgcatggactattcactgtgacactgtgctatgcacctacctaaacaataaagcttctgccaggtcacagtgctgttctacacgcatgcatcgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggtggttgaaaagcacagcatggttggtgcaggatcccttgtaaagcaaaacaccaggattccttctggagaggttaccttcctattttcttgctaagcaagtttttttttttcacttgctatatgagaaatgtgcaatcaactgccaacattttgtaatgaggtaattctcagagatgctggtatatgattacaaaattggcatgctctttgttcagaaaaatacctaattgttttcgaataatgcaattgaatgattctgaggtagaggtttagtctgcatttttcccttaatttacagttatgatgtgttgacacatattttgcatgaatttccttatttataaaactgtaatcggggactggaggattactaaacaaagctgctggctgcatgtttatactgatgtccatgttttatgttccacacttgttgtgaacagctgcaagatttaaatatgctttgtatttatattttatggttaagttaatacattgcatggctttattaaaccatatcgtttcctgacattgctaggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagaggagatggcgttcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagccgagaatgccaagaccttcgatgagattgagctcgagaagatgctgaggaagaagtttgcgcacaaagacgaggagtacgattcgatgctcggcgtggtccgtgagatcccaccagagcttatcctcccggacagtatcctcccaaacaaggctcaaaaagctgttgctcactgagtgttttcttaaagctcccgcttgggaagctttgctgttattacatgttgacttgtttatgacagttttgtctgtccgtagaggaaaaggaagtcaattggttcccctgcttttgacttgcttgcttgatagatgtgaagttcaagttatttgatactaaatagctgtagtgtgaaaaagtcagtgagctcagaaagtagaaattttgaggattttcgtgggtgcagaactaatttatgcaaaattcctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0642900, RefSeq:Os07g0642900