BGIOSGA019077

From RiceWiki
Revision as of 16:23, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019077

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019077, complete gene.

LocusTag

OS05G0120700

Ensembl Transcript ID

BGIOSGA019077-TA

Ensembl Protein ID

BGIOSGA019077-PA

Length

4656

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1155237..1159892

Sequence Coding Region

1155237..1156637,1156891..1156960,1157083..1157204,1157340..1157618,1157990..1158367
,1158667..1158776,1158983..1159211,1159314..1159892

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1155237..1159892 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1155237..1159892 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGAGGCCGGGCAGGACGCGCCGCCGCCGCCGGAGAAGGGCGTCGAGGTGGAGGTGTTCCCGGCGTGGGCGCGGGGCGTGGAGGAGTGCGAGGCGCGGCTGGGGGTCTCGGCGTCGCGGGGCTTGTCGTCGCGGGAGGCGGCGGCGCGGCTGCGGGCGCATGGCCCCAACGAACTCGCCGAGCACCCGGGACCCACGCTGCTGCAGCTCGTCGCGCAGCAGTTCGACGACACGCTCGTCCGCATCCTCCTCGCCGCCGCCGCCGTCTCCTTCGCGCTCGCGCTCTCCTCCTCCGCCGGCGCCGTCACGCTCTCCGCCTTCGTCGAGCCGCTCGTCATCTTCCTCATCCTCGTCGTCAACGCCGCCGTGGGTGTCTGGCAGGAGACCAACGCCGAGAAGGCGCTCGAGGCGCTCCGCGAGATCCAGTCCGACCACGCCGCCGTCCTCCGCGACGGCGACTGGCTACCCAGCCTCCCCGCGCGGGACCTCGTCCCGGGCGACATCGTCCAGCTCCGCGTCGGTGACAAGGTCCCCGCCGACATGCGCGTCCTCCGCCTCGTCACCTCCACGCTCCGCGTCGAGCAGGGCTCCCTCACCGGCGAGACCGCCTCCGTCAACAAGACCGCGCACCAAGTGCCCCACGACGACGCCGACATCCAGGCCAAGGAGTGTATGGTCTTCGCCGGCACCACCGTCGTCAATGGCAGCGCAATCTGCCTCGTCGTGCACACTGGGATGGCCACTGAGATCGGCAAAATCCACGCGCAGATCCACGAGGCCGCGCAGGAGGACGACGACACCCCGCTCAAGAAGAAGCTCAACGAATTCGGCGAGGCGCTCACCAAGATCATCGGCCTCATTTGCGCTTTGGTGTGGCTCATCAATGTCAAGTACTTCTTGACGTTTGAGCTCGATGGGTGGATGCCGAGGAACATCCGCTTCTCTTTCGAGAAGTGCACATACTACTTCGAGATCGCTGTGGCGCTCGCTGTCGCTGCCATACCGGAAGGACTGCCTGCCGTGATCACCACGTGCCTTGCACTTGGTACAAGGAAGATGGCCGCCAAGAATGCTCTTGTCAGGAAGCTTCCAAGTGTGGAGACCTTGGGATGCACCACCGTGATTTGCTCTGACAAGACCGGGACGCTGACGACGAACCAGATGTCTGTGGCGAAACTTGTGGCGATGGGAGATGCTGAAGGGAAGGTCAGGAGCTTCAAGGTCGATGGGACGACATATGATCCCCGGGATGGTAGAATTCACGATTGGCCTGCAGGGAGGATGGATGCAAACCTTCAGACGATCGCAAAGATTTCTGCTGTGTGCAATGATGCCAGTGTGGCACATTCTTCACATCAGTATACTGCAACTGGAATGCCGACAGAGGCAGCTTTAAAGGTCTTGGTTGAGAAAATGGGAATACCTGAAGGAATGAACGGATTGTCCTTGGATCCATCTGAAACATTAGGCTGCTGCCAATGGTGGAGCAATGTTGCCAAGAGGATTGCTACTCTTGAGTTTGACCGTACAAGGAAATCAATGGGAGTAATTGTTAAGTCCAAATCAGGAAGGAATGCTCTACTTGTGAAGGGAGCTGTTGAAAACTTGCTGGAGAGGAGTAGCCACATTCAACTGCTGGATGGTTCAGTTGTGCCGTTAGATGAAAAATCAAGGAAAGCTATTTTGGAAAACCTCCATGAAATGTCAATTAAAGCTCTGCGCTGCCTTGGTTTTGCATACAAAGAGGATCTAGCAGAATTTGCAAGTTACGATGGTGAAAACCACCCCGCTCACAAGCTTTTGCTGGATCCAGTCAATTATGCAGCAATCGAGACCAATTTGATATTCACTGGTCTTGCTGGCCTAAGGGATCCTCCAAGGGAAGAGGTTTTTGATGCTATTGAAGATTGCAGAGCTGCAGGCATCCGTGTTATGGTGATAACAGGAGACAACAAAGAAACTGCTGAAGCAATATGCCGTGAAATTGGTGTGTTTTCACATGATGAGGACATTACCTTAAAGAGTCTTACAGGAAAGGAGTTCATGGCACTTGAGGACAAGAAGACACTGCTGCGAAGGAAAGGTGGCCTACTGTTCTCTAGGGCAGAGCCTAGGCACAAACAAGAGATTGTGAGACTGCTCAAAGAAGATGGTGAAGTTGTTGCTATGACTGGAGATGGAGTTAATGACGCCCCTGCGCTAAAGCTGGCTGACATTGGAGTAGCAATGGGTATTACAGGCACTGAGGTTGCAAAAGAGGCCTCTGACATGGTTCTTGCTGATGACAATTTTAGTACCATTGTTGCGGCAGTTGGTGAAGGAAGGTCTATTTACAACAACATGAAAGCTTTCATCAGATACATGATTTCCTCAAACATTGGTGAAGTTGCGTCAATTTTCCTAACTTCTGCTCTGGGTATTCCTGAGGGGTTGATACCGGTTCAACTTCTATGGGTAAACCTTGTCACCGACGGTCCTCCTGCAACTGCATTAGGTTTCAATCCACCTGATAAAGACATCATGAAGAAACCGCCTAGAAAGAGTGATGACTCACTGATTACTCCCTGGATTTTGTTCCGTTACCTGGTCATTGGCCTTTATGTGGGGATTGCCACGGTCGGCATCTTTGTCATATGGTACACACATGGATCTTTCATGGGCATTGACCTCACCGGAGATGGTCACACCCTTGTCAGTTACTCTCAGCTCTCAAACTGGGGCCAGTGCTCTACCTGGAACAACTTCACAGTTACGCCTTTCACTGCTGGAGCTAGGACTTTCACCTTCGATGACAATCCTTGCGAGTACTTCCATGGTGGCAAAGTGAAGGCGACAACGCTCTCGCTGTCTGTCCTGGTGGCGATTGAGATGTTCAACTCACTCAACGCCCTCTCCGAAGACACTAGCCTCCTGAGGATGCCTCCTTGGGTAAACCCATGGCTGCTCCTTGCCATGTCAGTGTCGTTCGGGCTCCATTTCTTGATCCTCTACGTGCCGTTCCTCGCGCAAGTGTTTGGCATCGTGCCGCTCAGCTTGAACGAGTGGCTGCTGGTGTTGCTTGTTGCACTCCCGGTGGTGCTCATCGACGAGGTTCTCAAGTTTGTCGGAAGGTGTACAAGCTCATCAGGCCCCAAGAGGCGAACCAGGAAGCAGAAGGGCGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGEAGQDAPPPPEKGVEVEVFPAWARGVEECEARLGVSASRGLSSREAAARLRAHGPNELAEHPGPTLLQLVAQQFDDTLVRILLAAAAVSFALALSSSAGAVTLSAFVEPLVIFLILVVNAAVGVWQETNAEKALEALREIQSDHAAVLRDGDWLPSLPARDLVPGDIVQLRVGDKVPADMRVLRLVTSTLRVEQGSLTGETASVNKTAHQVPHDDADIQAKECMVFAGTTVVNGSAICLVVHTGMATEIGKIHAQIHEAAQEDDDTPLKKKLNEFGEALTKIIGLICALVWLINVKYFLTFELDGWMPRNIRFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAAKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSVAKLVAMGDAEGKVRSFKVDGTTYDPRDGRIHDWPAGRMDANLQTIAKISAVCNDASVAHSSHQYTATGMPTEAALKVLVEKMGIPEGMNGLSLDPSETLGCCQWWSNVAKRIATLEFDRTRKSMGVIVKSKSGRNALLVKGAVENLLERSSHIQLLDGSVVPLDEKSRKAILENLHEMSIKALRCLGFAYKEDLAEFASYDGENHPAHKLLLDPVNYAAIETNLIFTGLAGLRDPPREEVFDAIEDCRAAGIRVMVITGDNKETAEAICREIGVFSHDEDITLKSLTGKEFMALEDKKTLLRRKGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRKSDDSLITPWILFRYLVIGLYVGIATVGIFVIWYTHGSFMGIDLTGDGHTLVSYSQLSNWGQCSTWNNFTVTPFTAGARTFTFDDNPCEYFHGGKVKATTLSLSVLVAIEMFNSLNALSEDTSLLRMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLLVALPVVLIDEVLKFVGRCTSSSGPKRRTRKQKGE</aaseq>

Gene Sequence

<dnaseqindica>1..1401#1655..1724#1847..1968#2104..2382#2754..3131#3431..3540#3747..3975#4078..4656#ATGGGCGAGGCCGGGCAGGACGCGCCGCCGCCGCCGGAGAAGGGCGTCGAGGTGGAGGTGTTCCCGGCGTGGGCGCGGGGCGTGGAGGAGTGCGAGGCGCGGCTGGGGGTCTCGGCGTCGCGGGGCTTGTCGTCGCGGGAGGCGGCGGCGCGGCTGCGGGCGCATGGCCCCAACGAACTCGCCGAGCACCCGGGACCCACGCTGCTGCAGCTCGTCGCGCAGCAGTTCGACGACACGCTCGTCCGCATCCTCCTCGCCGCCGCCGCCGTCTCCTTCGCGCTCGCGCTCTCCTCCTCCGCCGGCGCCGTCACGCTCTCCGCCTTCGTCGAGCCGCTCGTCATCTTCCTCATCCTCGTCGTCAACGCCGCCGTGGGTGTCTGGCAGGAGACCAACGCCGAGAAGGCGCTCGAGGCGCTCCGCGAGATCCAGTCCGACCACGCCGCCGTCCTCCGCGACGGCGACTGGCTACCCAGCCTCCCCGCGCGGGACCTCGTCCCGGGCGACATCGTCCAGCTCCGCGTCGGTGACAAGGTCCCCGCCGACATGCGCGTCCTCCGCCTCGTCACCTCCACGCTCCGCGTCGAGCAGGGCTCCCTCACCGGCGAGACCGCCTCCGTCAACAAGACCGCGCACCAAGTGCCCCACGACGACGCCGACATCCAGGCCAAGGAGTGTATGGTCTTCGCCGGCACCACCGTCGTCAATGGCAGCGCAATCTGCCTCGTCGTGCACACTGGGATGGCCACTGAGATCGGCAAAATCCACGCGCAGATCCACGAGGCCGCGCAGGAGGACGACGACACCCCGCTCAAGAAGAAGCTCAACGAATTCGGCGAGGCGCTCACCAAGATCATCGGCCTCATTTGCGCTTTGGTGTGGCTCATCAATGTCAAGTACTTCTTGACGTTTGAGCTCGATGGGTGGATGCCGAGGAACATCCGCTTCTCTTTCGAGAAGTGCACATACTACTTCGAGATCGCTGTGGCGCTCGCTGTCGCTGCCATACCGGAAGGACTGCCTGCCGTGATCACCACGTGCCTTGCACTTGGTACAAGGAAGATGGCCGCCAAGAATGCTCTTGTCAGGAAGCTTCCAAGTGTGGAGACCTTGGGATGCACCACCGTGATTTGCTCTGACAAGACCGGGACGCTGACGACGAACCAGATGTCTGTGGCGAAACTTGTGGCGATGGGAGATGCTGAAGGGAAGGTCAGGAGCTTCAAGGTCGATGGGACGACATATGATCCCCGGGATGGTAGAATTCACGATTGGCCTGCAGGGAGGATGGATGCAAACCTTCAGACGATCGCAAAGATTTCTGCTGTGTGCAATGATGCCAGTGTGGCACATTCTTCACATCAGTATACTGCAACTGGAATGCCGACAGAGGCAGCTTTAAAGGTGAGAATCAATAAACTGTATGATATTCTCATTCTGTTAAAATGCTCCAGTTTTTGGTCCAAGAATATGGTGCATAGTTTGTTAATCCACTAGTTGCACATTTTTCAATCATGATTTGAGCAGTCTAGGAACATTGCCTACTGAAAGTAACGTTCTGGCATGTGTTGGTTCTAATTCAGATAATGCTGCTTGATGTTTGGAAACATTCTGTTGTAAAGCTCTGATATAACTTTTCTTTATTGGTTTCTTCTAGGTCTTGGTTGAGAAAATGGGAATACCTGAAGGAATGAACGGATTGTCCTTGGATCCATCTGAAACATTAGGTAAGCTAGAAATGCCTTTTCGGCTTAGCTTAGTATTACCTATCAGTTTCAACTACGTGCTTCTTAATTAGGATATTCTTCTAATCACGCACTGAGCTGATTATGAAATTGTTTGCTAACAGGCTGCTGCCAATGGTGGAGCAATGTTGCCAAGAGGATTGCTACTCTTGAGTTTGACCGTACAAGGAAATCAATGGGAGTAATTGTTAAGTCCAAATCAGGAAGGAATGCTCTACTTGTGAAGGTGTTAATTCTTTATTTCTTGCTATGTAGTCATCTCTTACTGATCTGCTGGACATGTATTGTTCACTGCATCTTTGTAGTATGTTCCAGTGGTTGGCGTTGTCATTAGTGCCTGATTTTGTGTTCTTAATAACAGGGAGCTGTTGAAAACTTGCTGGAGAGGAGTAGCCACATTCAACTGCTGGATGGTTCAGTTGTGCCGTTAGATGAAAAATCAAGGAAAGCTATTTTGGAAAACCTCCATGAAATGTCAATTAAAGCTCTGCGCTGCCTTGGTTTTGCATACAAAGAGGATCTAGCAGAATTTGCAAGTTACGATGGTGAAAACCACCCCGCTCACAAGCTTTTGCTGGATCCAGTCAATTATGCAGCAATCGAGACCAATTTGATATTCACTGGTCTTGCTGGCCTAAGGGTAAGATGATGCTTCTCATGATATGTTTTCAACCAGATTGTTTCCTTTTTTTTTTTAACTCCAATCAAGGAAAATCCCTGTTTCTTCTTGGTTCAACAAAATATGCATAGTAAGCACGGTTATGGACTTCAAGGCATATAAGGTCTAAATAAGATATACTTGACTAGGAGATAACAGAAAAGGCTAAGCATGAATTCTGTATAGCTAGGATAAGCTAATCCAAACAAGTACAGTCATCAATTATACAGAAAGTGATTTGCTGGGGACCAGTATTTAAGATCAATGATCATCTTGTGTAATTTTCTTTTCTTGGCAACCTATCTTCTTACAGTATTAATGTATCTTTCTCATTGATGTTTTAAATATGACAGGATCCTCCAAGGGAAGAGGTTTTTGATGCTATTGAAGATTGCAGAGCTGCAGGCATCCGTGTTATGGTGATAACAGGAGACAACAAAGAAACTGCTGAAGCAATATGCCGTGAAATTGGTGTGTTTTCACATGATGAGGACATTACCTTAAAGAGTCTTACAGGAAAGGAGTTCATGGCACTTGAGGACAAGAAGACACTGCTGCGAAGGAAAGGTGGCCTACTGTTCTCTAGGGCAGAGCCTAGGCACAAACAAGAGATTGTGAGACTGCTCAAAGAAGATGGTGAAGTTGTTGCTATGACTGGAGATGGAGTTAATGACGCCCCTGCGCTAAAGCTGGCTGACATTGGAGTAGCAATGGGTATTACAGGCACTGAGGTATGTACTTATTTCAGCACCATAGGTTGTTTTCAGCCAGTGCTTTCTTTCTTTAATTTCCTGTGCAGAAATATACAGGCCTTAAAATTTTCATGACATTTCCCTTTCAGTCCTTTTTTGGTTGTTAGCCCTTTGTACTTGTCTGCCAATATTTCAGCTAATCATCTATACTGTTCTGAGTTAATTTGAACAACATTGGTTAGAGATAACATGAATTTATAGGTCTTTTATTGTCCCAAAAGTACTGATATCTGTGACATAATTTGAATTGGTATCTCACTTATTTTTCTTTTGTTCAGGTTGCAAAAGAGGCCTCTGACATGGTTCTTGCTGATGACAATTTTAGTACCATTGTTGCGGCAGTTGGTGAAGGAAGGTCTATTTACAACAACATGAAAGCTTTCATCAGGTTAGTGATCTCAGAGCCTGTTTTTGTTGTTGTTCTCACTTTTTGCTTCAACACTTGCTTTTGTCACTTCTATTTTGGCAGAAACAAACAGACTAATGCTGCAGTAAAACATTGTTTCATCTAACATTTGCACCTCATAGTTGTGCAAGTTATCGTGTTTTTTTGTCTGTTCTGAGGATTCTAGCTGTCTTTCTTCACTGCTGCAGATACATGATTTCCTCAAACATTGGTGAAGTTGCGTCAATTTTCCTAACTTCTGCTCTGGGTATTCCTGAGGGGTTGATACCGGTTCAACTTCTATGGGTAAACCTTGTCACCGACGGTCCTCCTGCAACTGCATTAGGTTTCAATCCACCTGATAAAGACATCATGAAGAAACCGCCTAGAAAGAGTGATGACTCACTGATTACTCCCTGGATTTTGTTCCGTTACCTGGTAAATGATCTTTTTGATCTTCTATCATTTATGACAAAAATGATTCATCTCCTTGGCCTTACATTTTGAGATGATTTCTCATGAGCTAGACCTTATTCGCAGGTCATTGGCCTTTATGTGGGGATTGCCACGGTCGGCATCTTTGTCATATGGTACACACATGGATCTTTCATGGGCATTGACCTCACCGGAGATGGTCACACCCTTGTCAGTTACTCTCAGCTCTCAAACTGGGGCCAGTGCTCTACCTGGAACAACTTCACAGTTACGCCTTTCACTGCTGGAGCTAGGACTTTCACCTTCGATGACAATCCTTGCGAGTACTTCCATGGTGGCAAAGTGAAGGCGACAACGCTCTCGCTGTCTGTCCTGGTGGCGATTGAGATGTTCAACTCACTCAACGCCCTCTCCGAAGACACTAGCCTCCTGAGGATGCCTCCTTGGGTAAACCCATGGCTGCTCCTTGCCATGTCAGTGTCGTTCGGGCTCCATTTCTTGATCCTCTACGTGCCGTTCCTCGCGCAAGTGTTTGGCATCGTGCCGCTCAGCTTGAACGAGTGGCTGCTGGTGTTGCTTGTTGCACTCCCGGTGGTGCTCATCGACGAGGTTCTCAAGTTTGTCGGAAGGTGTACAAGCTCATCAGGCCCCAAGAGGCGAACCAGGAAGCAGAAGGGCGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019077