BGIOSGA019128

From RiceWiki
Revision as of 16:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019128

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019128, complete gene.

LocusTag

OsI_18344

Ensembl Transcript ID

BGIOSGA019128-TA

Ensembl Protein ID

BGIOSGA019128-PA

Length

2180

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2185368..2187547

Sequence Coding Region

2185368..2185526,2185781..2185861,2186334..2186525,2186639..2186874,2186965..2187547

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2185368..2187547 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2185368..2187547 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGGAGGCGGAGGTGATGCATCAGCCCGTGCCGGTGTTGGAGGTGCCGTACCACCGGTGCGTCGCCAAGGGTGTCGAGGAGGTGGCCGCCGCGGCGGCGGTGGCGCCGCCGCCGGTGGTCGAGGTCGAGGTCGCCGTCCAGGTGCCTCACATGGTTTATTATGGAGTTTACTGCCTTTCTGTTTATTACACGAGATTGTTTTCTGTTCGTGGATGCAAAAGACTGACACAGTTTGGGTTGGAGAGTGCTGCTGGTGCACCGAGCATATCAGTTGATGCACTACAGTTTGTTCCCAGTATTCGATCTGGTAGCTTTGCTGATATTGGACCTAGGAGGTACATGGAAGATGAGCACATCCGGATAGATGATCTCTCTGCCCATCTTGGATCGCTCTTGGTGTGTCCGTTGCCTAGTGCCTTCTATGGGGTCTTCGATGGCCATGGAGGCCTGGATGCTGCAGCCTACATGAAAAGGCATGCAATGAGGTTCCTGTTTGAGGACAGTGAGTTCCCACAAGCATCGCAAGTAGATGAAACATATGTTCAGTCAGTTGAGAACTCTGTGCGCAGAGCGTTCTTGCAAGCAGATCTTGCCTTAGCTGATGATTTAGATATCAGCCGCTCTTCCGGAACTACAGCACTCACCGCATTAGTCTTCGGAAGGCAATTGCTGGTTGCAAATGCGGGGGATTGCCGTGCGGTCCTTTGCCGGAGAGGCGTAGCGATGGAGATGTCTCGAGATCACAGAGCAAACTATGCCGAGGAGTGTGAACGGGTTGCTGCATCCGGAGGATACATCGAGGATGGCTACCTCAACGGAGTCCTATCCGTGACACGGGCCCTAGGGGACTGGGACATGAAAATGCCCGACGGCTCGATATCCCCTCTCATCGCCGAGCCAGAGTTCCGACAGACCATGCTCACGGAGGACGACGAGTTCCTCATCATGGGGTGCGACGGGATCTGGGACGTGATGACCAGCCAGCACGCGGTGAGCATCGTCCGACGGGGGCTCCGGCAGCACGACGACCCCGAGAGGTGCGCGAGGGAGCTCGTCATGGAGGCCAAGAGGCTCGAGACCGCCGACAACCTGACGGTGATCGTCGTCTGCTTCGTCTCGGAGCTTGGGTCGCCGCGGCGGGAGCAGGTGGGGGGGCAGGCGGGGGTGGCGAGGCCGAGGAGTTGCAAGAGCCTCTCTGCGGAGGCCCTGTGCAACCTGAGGAGCTGGCTGGAGACTGATCGCTAG</cdnaseq>

Protein Sequence

<aaseq>MVAEAEVMHQPVPVLEVPYHRCVAKGVEEVAAAAAVAPPPVVEVEVAVQVPHMVYYGVYCLSVYYTRLFSVRGCKRLTQFGLESAAGAPSISVDALQFVPSIRSGSFADIGPRRYMEDEHIRIDDLSAHLGSLLVCPLPSAFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQADLALADDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYIEDGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDDPERCARELVMEAKRLETADNLTVIVVCFVSELGSPRREQVGGQAGVARPRSCKSLSAEALCNLRSWLETDR</aaseq>

Gene Sequence

<dnaseqindica>1..159#414..494#967..1158#1272..1507#1598..2180#ATGGTGGCGGAGGCGGAGGTGATGCATCAGCCCGTGCCGGTGTTGGAGGTGCCGTACCACCGGTGCGTCGCCAAGGGTGTCGAGGAGGTGGCCGCCGCGGCGGCGGTGGCGCCGCCGCCGGTGGTCGAGGTCGAGGTCGCCGTCCAGGTGCCTCACATGGTGAGTTGCTCAACTTTGTGTTCTGTAGTTCTACGTTTTCAGTAGTATTTCAGTTGGGAGATCGAAGAATTTCGTGGGAAATAACATGGAATCTAGCAAGGATTACTAGCAGTTTAGCAGCTGTTTTTCAGTAATTTTAGGATTGTTTGTTAATACTACTCATGTGAAAAAGGTGCTTTCAGTTGTTGTAATCAGCTCTGATTTTTAGATATCTCTATGTAAATTATTGCTGTCATCTTGTTATTGGATTTTAGGTTTATTATGGAGTTTACTGCCTTTCTGTTTATTACACGAGATTGTTTTCTGTTCGTGGATGCAAAAGACTGACACAGTTTGTAAGAAAAAAAAAAAGTAGTCCCTTTTTAGGGGGTATAGGGTGGTGGTTGTAGGCCAGAAGGTTGAGAAGGTGGGTGCTGATATTATTGGATCCATTGTGTAGATAGTGCTAGTGGTAGTTGAGTTGTAGTATGTATTTATGCGCTTTCGCGCAAGTTCAACTTATCATACGAATTTGCGCAGATGATTGTTTATCTAGCCTAAAAGTGTTGTCCTGTTTCTATAGCTGTAGCTGAAACTTTTCAGCTCTTGTTCAGTATCTTATTTCAGTGTAGAGTGGGGTAGTGGGGTAAATCATAGTGCTGCGTGAGCGGCAGGATAGGATTATGTTTGAAACATAACTACGCAAGTAGGTCAGTGGCAGTGCTGGGTATATAATTTAGCAGATTAAAGAAGAATCGGTTGTTTATGTTTGTTTTGTGTCTGAGAAATAAGATTAGTAATTTTTGTGTTTCTGTTCATTATTAATAGGGGTTGGAGAGTGCTGCTGGTGCACCGAGCATATCAGTTGATGCACTACAGTTTGTTCCCAGTATTCGATCTGGTAGCTTTGCTGATATTGGACCTAGGAGGTACATGGAAGATGAGCACATCCGGATAGATGATCTCTCTGCCCATCTTGGATCGCTCTTGGTGTGTCCGTTGCCTAGTGCCTTCTATGGGGTAAGTGTAATCTTCTATGTGAATGCCTACCCTGATTTGTGATTTGTGAATGCTACTTCCTCAGCAACAATGGTTGAACTTATTGCCCGTGCTTCTTCCCTTTGCAATTTTAGGTCTTCGATGGCCATGGAGGCCTGGATGCTGCAGCCTACATGAAAAGGCATGCAATGAGGTTCCTGTTTGAGGACAGTGAGTTCCCACAAGCATCGCAAGTAGATGAAACATATGTTCAGTCAGTTGAGAACTCTGTGCGCAGAGCGTTCTTGCAAGCAGATCTTGCCTTAGCTGATGATTTAGATATCAGCCGCTCTTCCGGAACTACAGCACTCACCGCATTAGTCTTCGGAAGGTAAAAAAAAAACATATCCAGTATCTATAGTTGCACATCTCATGCTTCAGTGTGGATGCTCACTCGAGGTTCTGCTGAACTGTCTTGCAGGCAATTGCTGGTTGCAAATGCGGGGGATTGCCGTGCGGTCCTTTGCCGGAGAGGCGTAGCGATGGAGATGTCTCGAGATCACAGAGCAAACTATGCCGAGGAGTGTGAACGGGTTGCTGCATCCGGAGGATACATCGAGGATGGCTACCTCAACGGAGTCCTATCCGTGACACGGGCCCTAGGGGACTGGGACATGAAAATGCCCGACGGCTCGATATCCCCTCTCATCGCCGAGCCAGAGTTCCGACAGACCATGCTCACGGAGGACGACGAGTTCCTCATCATGGGGTGCGACGGGATCTGGGACGTGATGACCAGCCAGCACGCGGTGAGCATCGTCCGACGGGGGCTCCGGCAGCACGACGACCCCGAGAGGTGCGCGAGGGAGCTCGTCATGGAGGCCAAGAGGCTCGAGACCGCCGACAACCTGACGGTGATCGTCGTCTGCTTCGTCTCGGAGCTTGGGTCGCCGCGGCGGGAGCAGGTGGGGGGGCAGGCGGGGGTGGCGAGGCCGAGGAGTTGCAAGAGCCTCTCTGCGGAGGCCCTGTGCAACCTGAGGAGCTGGCTGGAGACTGATCGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019128