Os07g0646200
| Gene Name |
Os07g0646200 |
|---|---|
| Description |
Zinc finger, SWIM-type domain containing protein |
| Version |
NM_001188384.1 GI:297725898 GeneID:9267924 |
| Length |
4328 bp |
| Definition |
Oryza sativa Japonica Group Os07g0646200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:27632211..27636538 |
| Sequence Coding Region |
27632211..27632405,27632500..27632595,27632744..27635050,27635223..27635292,27636414..27636538 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:27632211..27636538 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:27632211..27636538 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgggaagcgagagcgtccccctccccgactcccgaggcgcacgacgacacacgacacccacgacacgcacagtgcgagagctctcgtcgagaccagcgccgccgccgccgccgatcatgtcggagcgcgagggcccgccgtcctccggccccgcggcggccgtggcgccgcctcccctcgccgccgaacccggtgcccgcggcggcggcgacggcggcggcggagggaggaagcggaagggcgcggcggccggagccggagccgcggccgcgcggaagcctcgaaaggattacgggacaaatcaggcttatgtgttctacggacattcgcgagatttccagtacgtgggcgtagaagatttgcctaaatgtgcacacgtgattgcggagcttccaccgcagtcgcagtcaatgtcactgatggatgtgcagatctggatcatcaaattgtttcggctccatcctgaaactcaagatctctcaatcaagggtttctactcggattattgcccctctgtcctaattccagagtggtattttgggtactggataacctatgattgtctacgtgatgaatcatgggcttcctttgccaagaaagttagggggagaagaaatgggatggaaatgttcgtcttatatgtggactcctctgaaatcaagcactccagcagtttgatcaaagccatacctgatgattattctcagttggaaacggctgtgctgcctgacggaaaatccctgtcgtcatttttccctttgaattgcacttccaaacgcctcaccgaagacctgacgatgacaaccacggagatcgccgcatatcttgctcaatactacggcgatcagtacagtcgtgctggggcatggagggcaaaaatgaaggctttggagctgcgctatggtaccttctatgattcacacaactatgcgccgaggttacttaaggacataaaacataagcacccttacagttttgtggacatcaaggatacagaggttgcagactgtaaagatttcagagttctccaccggatattttgggcattcgaccagtgcagaaggtcctttatgcattgtcgtcctgtgatctgcattaagggcacaccactctgtggtaaatatcaaggagtgctgatgactgctctagcatttgatgctaatgattactgcattccagtcgcatttgctgtggtcgaaggtgagagcaaggaaagctggttgtggtttctgaggaatgtgaatcattctgttgtgaatgggcgttctaatgtatgcctcatacatgattacaaaagagagttgcttgatgctgtagaggacctgcaggatagtcctgaagaagcatatccatggagaggcatacagagccggtggtgcgtcgaacaccttgctgaaagcttctttgcacattttggtgacaggaagctggtgatgttattcaagaaactctgtcagcaaagccgaccatgtaagtttggcaaaatttggaaggagctagatgagttgacactgaaatatacgcaggagaaagaaagtggtgctagtggggaaattcaacaggagtcagttgagcatggcgaaacagagtttgtggcacaaagaccacacatccatcttgattcagtgggagaggaggtggaaaggaattgctctggtggcacagagagcaaaataacaaggttctccgagtggatcggtccaaaaccaatggagaaatggtcattgttgtacgataaaaacgacgcaagatatggcatcatgggcaccagtatagctgatttatacaaagataaccatgtaatgaaggggataaggtgccttccgctctctggattactggacctgacataccgtcgcatggcagaatgttacgataccagaagtgctgctgcaaagaaatcaactggcaaccctttaattaacttccctgaatgcatccaggatgagatgaaggccaaattgcagaaagccgagacacatcacgtaacttgtataaacagtgggaataaaaacgctttctttgaggaaggacacggaatatttaaggtccaatcaaagaacaagtatgtgattgttgagctgacacagagagagacacaaacgcacaaacatcctaaagttcgaaccgtaatcagcggaaataccatccacaatactttagttcgagagccagtgataagaaaagctcactgttcttgcaacaagctgaagctgcttcgcaagccctgctcccatgtcatcgccgtctgctgtcaggttggagttagccctgatacatacatgtccccttactacactctggcttatcttgctgacacttggaggggcaaattcgatgcatcggaggccttaggagaacactacacattaggagacttttgcagagatccttgctattcaacacttatgttaggaaatccgccaacatggatccctgataaaaggatggagtgcggtcttcctgccttcctaacatcggacgggacccaaaatggcgttgatgaggaagagcaacaatgcagcattgagagtgtatcatcagctgctgacaatcaaggcactgaaaatcgttcatcaagagaaactgaccagcaaaatgcacctaacactgataatgctgatatatcctgttatctggacgccagactgtttattggatcagatgaaggtgtgaaggcgagatattggatcaaccccgataagaaggtactggagatcctgcatgctgaatccaggtccaagcaggaaatggctctgctgctttgccaaaacctcatcactatttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAGSESVPLPDSRGARRHTTPTTRTVRELSSRPAPPPPPIMSER EGPPSSGPAAAVAPPPLAAEPGARGGGDGGGGGRKRKGAAAGAGAAAARKPRKDYGTN QAYVFYGHSRDFQYVGVEDLPKCAHVIAELPPQSQSMSLMDVQIWIIKLFRLHPETQD LSIKGFYSDYCPSVLIPEWYFGYWITYDCLRDESWASFAKKVRGRRNGMEMFVLYVDS SEIKHSSSLIKAIPDDYSQLETAVLPDGKSLSSFFPLNCTSKRLTEDLTMTTTEIAAY LAQYYGDQYSRAGAWRAKMKALELRYGTFYDSHNYAPRLLKDIKHKHPYSFVDIKDTE VADCKDFRVLHRIFWAFDQCRRSFMHCRPVICIKGTPLCGKYQGVLMTALAFDANDYC IPVAFAVVEGESKESWLWFLRNVNHSVVNGRSNVCLIHDYKRELLDAVEDLQDSPEEA YPWRGIQSRWCVEHLAESFFAHFGDRKLVMLFKKLCQQSRPCKFGKIWKELDELTLKY TQEKESGASGEIQQESVEHGETEFVAQRPHIHLDSVGEEVERNCSGGTESKITRFSEW IGPKPMEKWSLLYDKNDARYGIMGTSIADLYKDNHVMKGIRCLPLSGLLDLTYRRMAE CYDTRSAAAKKSTGNPLINFPECIQDEMKAKLQKAETHHVTCINSGNKNAFFEEGHGI FKVQSKNKYVIVELTQRETQTHKHPKVRTVISGNTIHNTLVREPVIRKAHCSCNKLKL LRKPCSHVIAVCCQVGVSPDTYMSPYYTLAYLADTWRGKFDASEALGEHYTLGDFCRD PCYSTLMLGNPPTWIPDKRMECGLPAFLTSDGTQNGVDEEEQQCSIESVSSAADNQGT ENRSSRETDQQNAPNTDNADISCYLDARLFIGSDEGVKARYWINPDKKVLEILHAESR SKQEMALLLCQNLITI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..195#290..385#534..2840#3013..3082#4204..4328#atggcgggaagcgagagcgtccccctccccgactcccgaggcgcacgacgacacacgacacccacgacacgcacagtgcgagagctctcgtcgagaccagcgccgccgccgccgccgatcatgtcggagcgcgagggcccgccgtcctccggccccgcggcggccgtggcgccgcctcccctcgccgccgaacccgtgcgttcgatctcctcgccgcgctatctctctctctccgcttgcttcctcttcttctcctgttgttgaagtcgtgtgcgttctgtgcccgcagggtgcccgcggcggcggcgacggcggcggcggagggaggaagcggaagggcgcggcggccggagccggagccgcggccgcgcggaagcctcgaaaggtagccactcttgttcgattcgtttgagtatggagcaaagtgccacttcaacaacagtagatttccccaacaaaatctctgcatctactgttatttccccaaacacaacatcacaatgacgcatccgtactaccatggtttcatgtaggattacgggacaaatcaggcttatgtgttctacggacattcgcgagatttccagtacgtgggcgtagaagatttgcctaaatgtgcacacgtgattgcggagcttccaccgcagtcgcagtcaatgtcactgatggatgtgcagatctggatcatcaaattgtttcggctccatcctgaaactcaagatctctcaatcaagggtttctactcggattattgcccctctgtcctaattccagagtggtattttgggtactggataacctatgattgtctacgtgatgaatcatgggcttcctttgccaagaaagttagggggagaagaaatgggatggaaatgttcgtcttatatgtggactcctctgaaatcaagcactccagcagtttgatcaaagccatacctgatgattattctcagttggaaacggctgtgctgcctgacggaaaatccctgtcgtcatttttccctttgaattgcacttccaaacgcctcaccgaagacctgacgatgacaaccacggagatcgccgcatatcttgctcaatactacggcgatcagtacagtcgtgctggggcatggagggcaaaaatgaaggctttggagctgcgctatggtaccttctatgattcacacaactatgcgccgaggttacttaaggacataaaacataagcacccttacagttttgtggacatcaaggatacagaggttgcagactgtaaagatttcagagttctccaccggatattttgggcattcgaccagtgcagaaggtcctttatgcattgtcgtcctgtgatctgcattaagggcacaccactctgtggtaaatatcaaggagtgctgatgactgctctagcatttgatgctaatgattactgcattccagtcgcatttgctgtggtcgaaggtgagagcaaggaaagctggttgtggtttctgaggaatgtgaatcattctgttgtgaatgggcgttctaatgtatgcctcatacatgattacaaaagagagttgcttgatgctgtagaggacctgcaggatagtcctgaagaagcatatccatggagaggcatacagagccggtggtgcgtcgaacaccttgctgaaagcttctttgcacattttggtgacaggaagctggtgatgttattcaagaaactctgtcagcaaagccgaccatgtaagtttggcaaaatttggaaggagctagatgagttgacactgaaatatacgcaggagaaagaaagtggtgctagtggggaaattcaacaggagtcagttgagcatggcgaaacagagtttgtggcacaaagaccacacatccatcttgattcagtgggagaggaggtggaaaggaattgctctggtggcacagagagcaaaataacaaggttctccgagtggatcggtccaaaaccaatggagaaatggtcattgttgtacgataaaaacgacgcaagatatggcatcatgggcaccagtatagctgatttatacaaagataaccatgtaatgaaggggataaggtgccttccgctctctggattactggacctgacataccgtcgcatggcagaatgttacgataccagaagtgctgctgcaaagaaatcaactggcaaccctttaattaacttccctgaatgcatccaggatgagatgaaggccaaattgcagaaagccgagacacatcacgtaacttgtataaacagtgggaataaaaacgctttctttgaggaaggacacggaatatttaaggtccaatcaaagaacaagtatgtgattgttgagctgacacagagagagacacaaacgcacaaacatcctaaagttcgaaccgtaatcagcggaaataccatccacaatactttagttcgagagccagtgataagaaaagctcactgttcttgcaacaagctgaagctgcttcgcaagccctgctcccatgtcatcgccgtctgctgtcaggttggagttagccctgatacatacatgtccccttactacactctggcttatcttgctgacacttggaggggcaaattcgatgcatcggaggccttaggagaacactacacattaggagacttttgcagagatccttgctattcaacacttatgttaggaaatccgccaacatggatccctgataaaaggatggagtgcggtcttcctgccttcctaacatcggacgggacccaaaatggcgttgatgaggaagagcaacaatgcagcattgagagtgtatcatcagctgctgacaatcaaggcactgaaaatcgttcatcaagagaaactgaccaggtctgaattctgttgtgagtgtatcaccttatgttgtatcctgaatctgtaatgtccattgtacttgacctatcctaagtaaccctgaattttgccatgatcatttgcaatgctattgttctctcttgatagtgttgactcttgagaatagtacgtactgccttgttcatagcaaaatgcacctaacactgataatgctgatatatcctgttatctggacgccagactgtttattggatcaggtatttcaagtgtgctgttatgcttacatctttccccttttttcctttaaagttggaactatattgattatcgtgaataatcagccttttaacataatgactattacgtgacaacttctacagctatgttagatgctaacaataagttctcttatcttaaactaacagttggcatagtgtgctgattttagtatggtcgtgttactcgtgtaaccatgtactgttagttctgtaaatatcacaggctgaaaacacgaaaggccattaacacaagaatgccaaaacgagaaaaagttcactctagatccctcatcttgtcgtcgagtttcaaaaacacccctgaaccataaaaccagattcaacgtatcccctcacttaaaaaatatcagtgcacacgagatacacgccttggggacctcctcgtgtgcactagtttccgagtgtggacgtaaagtgaacttttttcccgaaacgatgatcacaagggcccatgggcctttgtactttgcttccacggcccaggacatcacggtctactaccatcatcaatggcgggaaaagcatgggagaaatggagggaaaatgagctcccattccccacccagaggccgccgccgccactgcggagcggagcttttttttcgcgaacacgtaaaaagattgcacgtcaatatatcagaagaaaagagttatagttacacaacacaatcagccagaccggtttatgccaggggaaaggaaaaaaacaaaataaaaatgttgaagcttagaaaaaactacggcggctaaacacaaactccaactaatgggaagggccaagccactctacactagtatttccgtgtgtggacgtaaagtgacgatgtcctcgccgtctcccgccgccgctggcgcctacgcgtccctgtccttcccaaaggagctctgctgccaagcaccagaatctctacaagagcacaggctcatatatgcagggaattttccttcctttttgtttttttttttcagtttcttcagaaaggttaacaggttttgtagcggatctatcgttgctttctgacttactgtttctctgaacagtgaacactgaagctttggttcctctgctggatttcatgtagatgaaggtgtgaaggcgagatattggatcaaccccgataagaaggtactggagatcctgcatgctgaatccaggtccaagcaggaaatggctctgctgctttgccaaaacctcatcactatttaa</dnaseqindica> |
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