BGIOSGA019310

From RiceWiki
Revision as of 16:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019310

Description

Japonica Group Os05g0188800 (Os05g0188800) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA019310, complete gene.

LocusTag

NM_001061379.2

Ensembl Transcript ID

BGIOSGA019310-TA

Ensembl Protein ID

BGIOSGA019310-PA

Length

1227

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5812456..5813682

Sequence Coding Region

5812456..5812635,5813197..5813682

Genome Context

<gbrowseImage1> name=IndicaChromosome05:5812456..5813682 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:5812456..5813682 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGGGGCGCGCGTTAATCTGAAGGGGTGGCAACAGGCAGCGGTTGCATTTGGTTCTGCATTTGGGGCATTGCTTGACCCTAGAAGAGCTGATCTGATAGCTACTCTTGGGGAGACTACTGGGAAGCCAGCATTTCACCGTGTGCTTCAGCGGATGAGGAACAGTGCTGAAGGCAGGGATGTTCTCCTGGAGCGTCCTCGAGTTATATCCACGCAGGTTTCTCATGCCTGGGACATGCCTCAGAACACATTTGGTGCAGCATATGCTCAGTTCATGGGATCAAGGAACTTCTCACCAGATGACCGCCCACCTGTCCGTTTCATTGACACAGATGAGCTTGCGTATGTTGCGACCCGTGCCCGTGAAGTCCATGACTTTTGGCATGTGCTGTTCGGCCTTCCTACGAACCTGATTGGAGAGACTGCCCTTAAGGTCATTGAGTTTGAACAGATGTTCCTTCCTATGTGCATGCTTTCAGTCGTTGGGGGCTCTGCAAGGTTCAATGAGAAACAAAGGACACTGTTTTTCCAGCATTATTTCCCATGGGCTTCAAAAGCTGGTCTTAAGTGCACAGATCTTATGTCTGTGTACTATGAGAAGCATTTTCATGAAGATTTGGAGGAAGCTGAGGAGGAANCTGGGGATATTATAGCGATGCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MQGARVNLKGWQQAAVAFGSAFGALLDPRRADLIATLGETTGKPAFHRVLQRMRNSAEGRDVLLERPRVISTQVSHAWDMPQNTFGAAYAQFMGSRNFSPDDRPPVRFIDTDELAYVATRAREVHDFWHVLFGLPTNLIGETALKVIEFEQMFLPMCMLSVVGGSARFNEKQRTLFFQHYFPWASKAGLKCTDLMSVYYEKHFHEDLEEAEEEXGDIIAMP</aaseq>

Gene Sequence

<dnaseqindica>1..180#742..1227#ATGCAGGGGGCGCGCGTTAATCTGAAGGGGTGGCAACAGGCAGCGGTTGCATTTGGTTCTGCATTTGGGGCATTGCTTGACCCTAGAAGAGCTGATCTGATAGCTACTCTTGGGGAGACTACTGGGAAGCCAGCATTTCACCGTGTGCTTCAGCGGATGAGGAACAGTGCTGAAGGCAGGGTAAACTCATGCTACCCTCTATTTCCTAAAGGGTGACGTTATGCCGATGCATCCATTTGTTGTGCTTGACCATCTCTTTATAGCCTTTTTTACTAGCATATTCTGTAAATAATATACATATATACTCAGCTTCTGAAACAGCAACAGTTTCTCGGTCAACAAATGCTAAGGACTGTATGATGTAGATTTTTTGTGTGAAGTAGCATTATCCTTTTTACTTGGTTGTTTCAGGGAGCAAATGTTATCCTGAAAAATGGAATTTAAGGTGTAGGTCTTCTAGCGAATTATTTTTCGTATGTTGTCCATATTTTTGTTGTTTGTTTGTTCTGTTATGCATTTTACTCTCCAGAATATGTTCCTTATTTGGCTGCAGTATAAGTTTACCATTTAGTGAACAATAAATTTAAACCTGCTATTGCTATACTTGATGCAATTTTCCTTCTTATTACATCACTGCCATGCAATTTGCAAGTACATAGCAACACATGCCAACTGAAAATGTGTACCCAACTCTGTGGACTTTTTTTCCCAATTGACTTAACTAAGATAATATTCCTGCAGGATGTTCTCCTGGAGCGTCCTCGAGTTATATCCACGCAGGTTTCTCATGCCTGGGACATGCCTCAGAACACATTTGGTGCAGCATATGCTCAGTTCATGGGATCAAGGAACTTCTCACCAGATGACCGCCCACCTGTCCGTTTCATTGACACAGATGAGCTTGCGTATGTTGCGACCCGTGCCCGTGAAGTCCATGACTTTTGGCATGTGCTGTTCGGCCTTCCTACGAACCTGATTGGAGAGACTGCCCTTAAGGTCATTGAGTTTGAACAGATGTTCCTTCCTATGTGCATGCTTTCAGTCGTTGGGGGCTCTGCAAGGTTCAATGAGAAACAAAGGACACTGTTTTTCCAGCATTATTTCCCATGGGCTTCAAAAGCTGGTCTTAAGTGCACAGATCTTATGTCTGTGTACTATGAGAAGCATTTTCATGAAGATTTGGAGGAAGCTGAGGAGGAANCTGGGGATATTATAGCGATGCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019310