Os07g0648000

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Revision as of 08:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0648000| Description = Armadillo-like helical domain containing protein| Version = NM_001067009.1 GI:115473750 GeneID:4344114| Length = 331...")
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Gene Name

Os07g0648000

Description

Armadillo-like helical domain containing protein

Version

NM_001067009.1 GI:115473750 GeneID:4344114

Length

3314 bp

Definition

Oryza sativa Japonica Group Os07g0648000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27719128..27722441

Sequence Coding Region

27719279..27719713,27720394..27722397

Expression

GEO Profiles:Os07g0648000

Genome Context

<gbrowseImage1> name=NC_008400:27719128..27722441 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27719128..27722441 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatcgacactacggctgatcatggcggcggcgccggcgccggcggcgtggacattcccatgcaaatactagtgcagccgccgccgttgccgccgccgacggcgacggcgacggcgaggcaccggagaacgcacaccggcgactcgacggcgtcgtcgtacgagccgcagcggcggccggtggagcaccaggtctcgtccatgcacgccgccaccgcctccgacgacggcggcggcgtcgacgacgtggtgccggagcgcaaggtgacggcgttcgcgctccacgtcgcggtgctcgagaaggccgcgtcgcacgtcggcgccgtctgcttcgtgtgggcgacggtggtcatcctcggcgggttcgccgccgacctcgacgcccgggacttctggctcgtcaccgccatcctcctcgtcgaggggacgagggtgttcagccggagcaacgagctcgatctgcaggagcagccgatgcacctcccggacgccgccgccgccgccgccggagacgacgacgacgacccgccgccgccgcacaaggcggcggcggcggcctcgcccatccacctcctccccctcggcggctggctcgtcgaggcgaggaacgtgagctacgtcctctactggctccagctcctctcggcgtcggcgtgcgtcgcgctgtcgctgctgcgcctcgccacgctccgcttcgccggcgacaatggcggcggcggcaacaagaacgcgtactacgcgctgatgctgttctacgtgctcgcgctgtcggaggcggtgatcttcctggtggagcgcgcgtactgggagtgggtgctcagctatcggcgcctggtcgaggcggtgagcggcgagtgcgacctcggcgacgccggcgtggtgccgatcaagcggttcttctaccgcgccttctcgaggtcggtcgagggcggcatcctcgacgccacgcggatggacctcgtctccttcgccgtcgagctcctctcatcggactccggcgacgagcagctcatcggcgcgcacatcctccggggctccatcgccaaccgcgactcggcgaggcgggcggtgcgcaagatcggcacgtcggcggccaccgtcgagcggctggtggagatggtgagctggaagagccccagcaagcgccgcgtcaggtcgctcgccgccgaggtcgtcctccgcctcgccggcaagcgccgcaacctcatccgcgtcgccaccatccccggcgccatcgagtccatctccaccttactcgagacccccaccaccgacgccgccgccggcgacctcgccatgaacgagatggggctccacatcatgaagaagctggcgcgcgagcacggcaacgcggcgaagatctcgagcacaaggggtgtcctctccaggatcatacacttcacccggacgagcagggcggcgctgcagatctgcgccggcggcgaggggagcctgccggcgaagacggtgctccggtcgctgcaggtggtgaagaacctctcgagcacgccggggcacaccggcgaggcgatcaggagggagatctccgacaacgtgttcgtcctcggcaacatccgcaaggtgctccagcacggcggcgagcgccacggcaagatgcagctgacggcgatcggcgtcctcgccgacctcgccatcgacggcgacgccaaggagaagatcggctgcacgggcgacatgatcgcgcatctgctggacatgttcgccggctcgccggagtcggctccggcggtcgcctacgcggcgcagggggcggcgcacatcaggctgcaggccggcgaggtggtggcgctgctcgccctcgagagcgccgccaactgcgaccggatactccgggaagccgccgtcgtcgagaggctggtgatgacgctgcaccaccccgggctgcagatcacgtcatccagaatcctactgaacctgtgcaggtacagcaggagcgaccacttcttgcagctcagcagcctcactgcagctgtcccaatagtgttcaaagcaattatggttgagaagagcagcttgcttgaggtgtctataggattggcaatacagattacaaggcttgcaacacctgaatttcacaaggaaatctttggaaaggcaggtgtaccagatacagacattgcagggaggctagtggagattctgaaagagcacaggacacccagggtgaaggttccgaggatgagaaggttcgtcatcgagctcgccatcgccatgatgagaggcgacgccgagctcgtccccttcttcaggagcatggagctggagaaggagctcaggagcgtcgtcaggtcgacgtccgagctcgagagcttcaacatgttctctggcagcattgggctgagcaggcacagctcaactctggcctcacttgtagatgatgccatggagatcatgcaggctctgcaagacagttaa</cdnaseq>

Protein Sequence

<aaseq>MAIDTTADHGGGAGAGGVDIPMQILVQPPPLPPPTATATARHRR THTGDSTASSYEPQRRPVEHQVSSMHAATASDDGGGVDDVVPERKVTAFALHVAVLEK AASHVGAVCFVWATVVILGGFAADLDARDFWLVTAILLVEGTRVFSRSNELDLQEQPM HLPDAAAAAAGDDDDDPPPPHKAAAAASPIHLLPLGGWLVEARNVSYVLYWLQLLSAS ACVALSLLRLATLRFAGDNGGGGNKNAYYALMLFYVLALSEAVIFLVERAYWEWVLSY RRLVEAVSGECDLGDAGVVPIKRFFYRAFSRSVEGGILDATRMDLVSFAVELLSSDSG DEQLIGAHILRGSIANRDSARRAVRKIGTSAATVERLVEMVSWKSPSKRRVRSLAAEV VLRLAGKRRNLIRVATIPGAIESISTLLETPTTDAAAGDLAMNEMGLHIMKKLAREHG NAAKISSTRGVLSRIIHFTRTSRAALQICAGGEGSLPAKTVLRSLQVVKNLSSTPGHT GEAIRREISDNVFVLGNIRKVLQHGGERHGKMQLTAIGVLADLAIDGDAKEKIGCTGD MIAHLLDMFAGSPESAPAVAYAAQGAAHIRLQAGEVVALLALESAANCDRILREAAVV ERLVMTLHHPGLQITSSRILLNLCRYSRSDHFLQLSSLTAAVPIVFKAIMVEKSSLLE VSIGLAIQITRLATPEFHKEIFGKAGVPDTDIAGRLVEILKEHRTPRVKVPRMRRFVI ELAIAMMRGDAELVPFFRSMELEKELRSVVRSTSELESFNMFSGSIGLSRHSSTLASL VDDAMEIMQALQDS</aaseq>

Gene Sequence

<dnaseqindica>2729..3163#45..2048#aaaccccaagtgcacttgtgcacgcactcgggaatacaaggctaatggccatcgacactacggctgatcatggcggcggcgccggcgccggcggcgtggacattcccatgcaaatactagtgcagccgccgccgttgccgccgccgacggcgacggcgacggcgaggcaccggagaacgcacaccggcgactcgacggcgtcgtcgtacgagccgcagcggcggccggtggagcaccaggtctcgtccatgcacgccgccaccgcctccgacgacggcggcggcgtcgacgacgtggtgccggagcgcaaggtgacggcgttcgcgctccacgtcgcggtgctcgagaaggccgcgtcgcacgtcggcgccgtctgcttcgtgtgggcgacggtggtcatcctcggcgggttcgccgccgacctcgacgcccgggacttctggctcgtcaccgccatcctcctcgtcgaggggacgagggtgttcagccggagcaacgagctcgatctgcaggagcagccgatgcacctcccggacgccgccgccgccgccgccggagacgacgacgacgacccgccgccgccgcacaaggcggcggcggcggcctcgcccatccacctcctccccctcggcggctggctcgtcgaggcgaggaacgtgagctacgtcctctactggctccagctcctctcggcgtcggcgtgcgtcgcgctgtcgctgctgcgcctcgccacgctccgcttcgccggcgacaatggcggcggcggcaacaagaacgcgtactacgcgctgatgctgttctacgtgctcgcgctgtcggaggcggtgatcttcctggtggagcgcgcgtactgggagtgggtgctcagctatcggcgcctggtcgaggcggtgagcggcgagtgcgacctcggcgacgccggcgtggtgccgatcaagcggttcttctaccgcgccttctcgaggtcggtcgagggcggcatcctcgacgccacgcggatggacctcgtctccttcgccgtcgagctcctctcatcggactccggcgacgagcagctcatcggcgcgcacatcctccggggctccatcgccaaccgcgactcggcgaggcgggcggtgcgcaagatcggcacgtcggcggccaccgtcgagcggctggtggagatggtgagctggaagagccccagcaagcgccgcgtcaggtcgctcgccgccgaggtcgtcctccgcctcgccggcaagcgccgcaacctcatccgcgtcgccaccatccccggcgccatcgagtccatctccaccttactcgagacccccaccaccgacgccgccgccggcgacctcgccatgaacgagatggggctccacatcatgaagaagctggcgcgcgagcacggcaacgcggcgaagatctcgagcacaaggggtgtcctctccaggatcatacacttcacccggacgagcagggcggcgctgcagatctgcgccggcggcgaggggagcctgccggcgaagacggtgctccggtcgctgcaggtggtgaagaacctctcgagcacgccggggcacaccggcgaggcgatcaggagggagatctccgacaacgtgttcgtcctcggcaacatccgcaaggtgctccagcacggcggcgagcgccacggcaagatgcagctgacggcgatcggcgtcctcgccgacctcgccatcgacggcgacgccaaggagaagatcggctgcacgggcgacatgatcgcgcatctgctggacatgttcgccggctcgccggagtcggctccggcggtcgcctacgcggcgcagggggcggcgcacatcaggctgcaggccggcgaggtggtggcgctgctcgccctcgagagcgccgccaactgcgaccggatactccgggaagccgccgtcgtcgagaggctggtgatgacgctgcaccaccccgggctgcagatcacgtcatccagaatcctactgaacctgtgcaggtacagcaggagcgaccacttcttgcagctcagcagcctcactgcagctgtcccaatagtaagttctcaaaaaccaaccaaaaaatatgagagaattctttttttagaagggtaatttttacctagcctctacatctaaccagatatatatagcctttttaatagggaacttagctgtcccaatagaaagttctcaaaaaccaaccaaaaaaggatgagaattctttttttttagagaagggtaatttttacctaggctgagtttagttcacgctaaaattggaagtttggttgaaattgaaacaatgtgatggaaaagttggaagtttatgtgtgtaggaaagttttgatgtgatggaaaagttgaaagtttgaagaaaaaatttagaactaaacaaggccgtagcctctacatccaaccggatatatatagcctttttaattgggaacttaacctatcaaacagggaatttagccctcaaataacccaaactgaaattcgctcctatagagacttgaactcagaaccatgaagtgctactcatgtcactgcaaccatgagagaattcctgtgttgatgttcttttgaaacaaatcaaagaaaccaataaaaaacatttaactagagtaaactcaagggcatagaatagattctctagaacaagatcacttatttcattcttcagtagacatcgttgctatgatttgatgaatgatgtctgctacatgatttcacaggtgttcaaagcaattatggttgagaagagcagcttgcttgaggtgtctataggattggcaatacagattacaaggcttgcaacacctgaatttcacaaggaaatctttggaaaggcaggtgtaccagatacagacattgcagggaggctagtggagattctgaaagagcacaggacacccagggtgaaggttccgaggatgagaaggttcgtcatcgagctcgccatcgccatgatgagaggcgacgccgagctcgtccccttcttcaggagcatggagctggagaaggagctcaggagcgtcgtcaggtcgacgtccgagctcgagagcttcaacatgttctctggcagcattgggctgagcaggcacagctcaactctggcctcacttgtagatgatgccatggagatcatgcaggctctgcaagacagttaacaaatgaccacaggacagactgaaaatggtaaatgcctgtgattggttgtatgttgggatatgcgatgaatctaattgtaaattcagaaataatctattcaattgatcagtcaaaactgtaaataacaaaaggcaagtgtattctcatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0648000, RefSeq:Os07g0648000