Os07g0656100

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Revision as of 08:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0656100| Description = Protein of unknown function DUF580 family protein| Version = NM_001067036.2 GI:297607736 GeneID:4344145| Length = 37...")
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Gene Name

Os07g0656100

Description

Protein of unknown function DUF580 family protein

Version

NM_001067036.2 GI:297607736 GeneID:4344145

Length

3730 bp

Definition

Oryza sativa Japonica Group Os07g0656100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28250618..28254347

Sequence Coding Region

28251442..28252815,28253765..28254019,28254122..28254145

Expression

GEO Profiles:Os07g0656100

Genome Context

<gbrowseImage1> name=NC_008400:28250618..28254347 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28250618..28254347 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccgccgacaacgccgccgcgccgccgcggggagatgtgccggagaggggcagaggagggggggagccggaggcgaaggagagggaggtgaaggtggtcgtggtggacgagccgcctggggcgccggtggcgaggctgcaggcgcagcggccgctggcgccgctgcaggtgaccacgcaggcgccgccgccgcccatgtccgtggcctccggcggcgttgagccgccgccacaggtggcgactttccagcccgtcatgcagaccccaccacaggtggcgttcgcgtcgctcaattcgcgcgtgtacaccaatggcatcacgctgtgcgtgttcctggtccacctcgccgcggccacgttcgccgtcgggttcttcgtgttcagggccgtcaaggacatcgtgcagcacccgcgttcccggaacgcgcagcgcgagcgaagcctgctgcgggaatggctgcctccggtggagggcgcggtggcgctcagcatcgtgctggcgttcgcgtggcagaaggcggtgcgggcgtggccgcgcgccatggtgggcgtcatcctgtggtccagcttcggcatcacgctggcggtgggcgcgatgctgatgtgcttctccatgccggccaccgtagggctcggcgtcgccatggtgatgttctccatcgggacggggctgtacgcgtgctgggtgacgcgccgcgtcgggttcacggcgcgggtgttcgagcgcgccgtgcagccggtggacaagttccgggggctgaacgggccggcctacctgatggtggcggccgggttcgtgtggatctccgtgtggtgcgtcgcggtgatcggcgcggcgaactaccggttcccggggctgaccatcctcggcctggtgctcagcttgatgtggacggcggaggtgatgcggaacgtggcgaacctgacggcgagccgggtgatcgcgctctactacctccgcggcatgcagtccagcgtgcagttcagcttccagcgcgcgctctcctacaacctcggcagcgcctgcctcggctcgctgttcgtccccaccatcgaggcgctccgcatcgtcgcccgcggcctcaacctcctcgagggcgaggacgagttcatgttctcctgcgcgcactgctgcctccacgtcatgaacgccatcttcgagttcggcaacagctgggccttcgtccacgtgagcttcgacggacacacgttcttcgttcttgttgctccatggtttaagtttgtggtgacaatggcggatgggtggtggtgtttgcagatcgcggcgtacgggagggggtttgtgcaggcgtcgaggagcacgtgggagcagttcgagaggctacaggggatgccggcgctggtggactcggacatcacgagctcggtgtgcttcctcaccggggtcaccagcggcgcgctctgcgtcgcgctcgcggggtcgtggacgttcgccacgcacaagcactacaccgccaccgtctcgctgctcgccttcttcgtcggatacctcatggttcgcaccgcagcttcgcgccccacctctctagacacattttctttcggagatttgttccgagcgagtgaaaaagtatctcgagataccgttacctcacgataccaaatcgtttccgatcgttggatctag</cdnaseq>

Protein Sequence

<aaseq>MGAADNAAAPPRGDVPERGRGGGEPEAKEREVKVVVVDEPPGAP VARLQAQRPLAPLQVTTQAPPPPMSVASGGVEPPPQVATFQPVMQTPPQVAFASLNSR VYTNGITLCVFLVHLAAATFAVGFFVFRAVKDIVQHPRSRNAQRERSLLREWLPPVEG AVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCFSMPATVGLGVAMV MFSIGTGLYACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWCVA VIGAANYRFPGLTILGLVLSLMWTAEVMRNVANLTASRVIALYYLRGMQSSVQFSFQR ALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLHVMNAIFEFGN SWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRSTWEQFERL QGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAFFVGYLMV RTAASRPTSLDTFSFGDLFRASEKVSRDTVTSRYQIVSDRWI</aaseq>

Gene Sequence

<dnaseqindica>1533..2906#329..583#203..226#accaacggtcacagattagcctccgcctcctccctctctcctcctctcgccaccaaatcctccatagtccacaccccaccaccactccaccaccatcccaaccaacaacacttcgccatcacgccgacgccaggaggagccacgccacgccgcgccgcgctcgcggtcgacctcctcctccccccggtgccctgacgacgacatgggcgccgccgacaacgccgccgtacgggccgttcttggctctttcctctctctctgagtagtgtctactgtctactgtgcttcttcttgctcatggggttgctccgttgttggattcgtgcaggcgccgccgcggggagatgtgccggagaggggcagaggagggggggagccggaggcgaaggagagggaggtgaaggtggtcgtggtggacgagccgcctggggcgccggtggcgaggctgcaggcgcagcggccgctggcgccgctgcaggtgaccacgcaggcgccgccgccgcccatgtccgtggcctccggcggcgttgagccgccgccacaggtggcgactttccagcccgtcatgcagaccccaccacaggtaactaaacaaatgcccaatttgctgatttctttttggctgaatttaaaattcggtggtctctgaatcttcttgatttaaatagtgagattggctgagtcttttctacgcatgtggggtgtgtgtgcgtgtgtgagtgagatcaactgtttgtagcacaaaactggttggtggacatgtcaataattttgtttggtataatcaagcaactcttttgtatagttcaatcccctccacttgacatttcggcataaaaatttctgcgatcatgtggcgactttggctgcaacgacaatggcagaattggttttttaactagttccaagaaacagtttttagaggatacagaaagttgagtttgatctcgttttatacaattctaaaccacttgtactactattttactttgaaaagatttgattgggttttggatatattttgtggtataactcgtatctgagtaaaaagaaagttgaagtattttgcaagttggaaatgctttcaatcaatcaagcagattagcaatgtttgcactcagcaacaaccgaataaatcagcaacgcgtgcagctatgtgcgagcccaaagttgctcagcctttcggtgacagaaaaagataagagaggtggtagtgtttgacacgatttcttaatcaatgtagcctaacgtatagccttcattcattagatgactcatgtgtaacttaagctctaatacctccctaatagaatacctctagaatagagtaatgcactaatgcttggaatcgaatctccagttcaccgtacaagttgattttcatagcaattattccataggtaccaaaacctattgcccgttagattaagtagtagattaagcttcaggttgcagaacatgtgctaggtaatgtcctatgctaatccaatttggttgtaattgagtaaattaattaactttgagtgtggcaggtggcgttcgcgtcgctcaattcgcgcgtgtacaccaatggcatcacgctgtgcgtgttcctggtccacctcgccgcggccacgttcgccgtcgggttcttcgtgttcagggccgtcaaggacatcgtgcagcacccgcgttcccggaacgcgcagcgcgagcgaagcctgctgcgggaatggctgcctccggtggagggcgcggtggcgctcagcatcgtgctggcgttcgcgtggcagaaggcggtgcgggcgtggccgcgcgccatggtgggcgtcatcctgtggtccagcttcggcatcacgctggcggtgggcgcgatgctgatgtgcttctccatgccggccaccgtagggctcggcgtcgccatggtgatgttctccatcgggacggggctgtacgcgtgctgggtgacgcgccgcgtcgggttcacggcgcgggtgttcgagcgcgccgtgcagccggtggacaagttccgggggctgaacgggccggcctacctgatggtggcggccgggttcgtgtggatctccgtgtggtgcgtcgcggtgatcggcgcggcgaactaccggttcccggggctgaccatcctcggcctggtgctcagcttgatgtggacggcggaggtgatgcggaacgtggcgaacctgacggcgagccgggtgatcgcgctctactacctccgcggcatgcagtccagcgtgcagttcagcttccagcgcgcgctctcctacaacctcggcagcgcctgcctcggctcgctgttcgtccccaccatcgaggcgctccgcatcgtcgcccgcggcctcaacctcctcgagggcgaggacgagttcatgttctcctgcgcgcactgctgcctccacgtcatgaacgccatcttcgagttcggcaacagctgggccttcgtccacgtgagcttcgacggacacacgttcttcgttcttgttgctccatggtttaagtttgtggtgacaatggcggatgggtggtggtgtttgcagatcgcggcgtacgggagggggtttgtgcaggcgtcgaggagcacgtgggagcagttcgagaggctacaggggatgccggcgctggtggactcggacatcacgagctcggtgtgcttcctcaccggggtcaccagcggcgcgctctgcgtcgcgctcgcggggtcgtggacgttcgccacgcacaagcactacaccgccaccgtctcgctgctcgccttcttcgtcggatacctcatggttcgcaccgcagcttcgcgccccacctctctagacacattttctttcggagatttgttccgagcgagtgaaaaagtatctcgagataccgttacctcacgataccaaatcgtttccgatcgttggatctagctggacaagatggacattgttagatccaacaatcggaaatgatttgttaccggtatctctaggtattttttgttagaccgaagcaaattttttcttttgttgtgctcacgagaatttttgttgtgcagacacggattgggatggcgctgccacaggcgtgcgtgggatgctactacgtgtgcttcgcggagaacccgacgtcgcggctgttcgatcccacgataccggagcggctgcacaagatgcaggaaggcgccgacccgctcgtgccgacgccgcgcttcccgcaacaacaccccggcgccgcctgatcgcgacacaaaaaagctcacccgatcaacgagtcccaaaccctttggagattcttgcagaaacacatgagaacgaggtgatctcatcctgtcgcctgtgcagcctgagctgacccggtaggcgagactcctctcgtcgttgcgtgaatgggaggcaactcgagatggaatcatgaatcctttggaccatgctgcaagtgtaggcgagcagaatagtagtagcagagaatttggacccaacccctattgctagactttcccccttttcgtttctgtaaatttcccccatttttttgacaccaccgattttttgttagtgaaattagatgacaagcctgaacatttcatatttcaggtgtgtaaagaggtttcattacatctataggaaattcttgtgaatattatccaactttttttttatccttttaaggtcatactcctatttgtttccaagatgaccatgatgaagtcatgaactggaccttataattgaagggcacagagtatcagagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0656100, RefSeq:Os07g0656100