Os09g0481400

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0481400| Description = Similar to Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3- O-methyltransferase) (CCoAMT) (CCoAO...")
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Gene Name

Os09g0481400

Description

Similar to Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3- O-methyltransferase) (CCoAMT) (CCoAOMT)

Version

NM_001070030.1 GI:115479802 GeneID:4347397

Length

1349 bp

Definition

Oryza sativa Japonica Group Os09g0481400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19128744..19130092

Sequence Coding Region

19128879..19129184,19129265..19129399,19129480..19129624,19129746..19129825,19129935..19130045

Expression

GEO Profiles:Os09g0481400

Genome Context

<gbrowseImage1> name=NC_008402:19128744..19130092 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19128744..19130092 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaccggcgctggagaaggcaaggagacggccgccgtcgccggcggcggcggcggaggtagcctgcacagtaagaccctcctcaagagcgagccgctctaccagtacgtgctggagtccaccgtgttcccgcgcgagcccgactgcctgcgcgagctccgcctcgccaccgccaatcaccccatggcggtcatggcggcctcgccggatcaggtgcagctgttcggccttctgatcgagctgatcagcgccaagaacgccatcgaggtcggcgtgttcaccgggtactcgctgctcgccaccgccctcgcgctccctgacgacggcaagatcgtggccatcgacgtgagccgggagagctacgacgaggtcggagcgccggtgatcgacaaggccggcgtggcgcacaaggtcgacttccgcgtcggcctcgccatgccggtgctcgacgagctcgtcgccgaggaggggaacaaggggaggttcgacttcgcgttcgtggacgcggacaaggtgaacttcctcggctaccacgagcggctgctgcagctggtcagggtcggcggcctcatcgcctacgacaacacgctgtggggcggctcggtggcggcgccgccggcggcggccgacgaggcggtgccgtcggggcgggaccgctcgctcgccgcgctcgccagggagttcaacgcggcgatcgccgccgaccgccgcgtcaagccgtgccagctcgccatcgccgacggcgtcatgctctgccgccgcgtggcctga</cdnaseq>

Protein Sequence

<aaseq>MAATGAGEGKETAAVAGGGGGGSLHSKTLLKSEPLYQYVLESTV FPREPDCLRELRLATANHPMAVMAASPDQVQLFGLLIELISAKNAIEVGVFTGYSLLA TALALPDDGKIVAIDVSRESYDEVGAPVIDKAGVAHKVDFRVGLAMPVLDELVAEEGN KGRFDFAFVDADKVNFLGYHERLLQLVRVGGLIAYDNTLWGGSVAAPPAAADEAVPSG RDRSLAALAREFNAAIAADRRVKPCQLAIADGVMLCRRVA</aaseq>

Gene Sequence

<dnaseqindica>909..1214#694..828#469..613#268..347#48..158#atagctggtgcctggtggcgagcgcaacgaaccacaaggaagagcagatggcggccaccggcgctggagaaggcaaggagacggccgccgtcgccggcggcggcggcggaggtagcctgcacagtaagaccctcctcaagagcgagccgctctaccaggtaattaattatccatctaaacaaccaaacaaagaaaaacaattgatcaccgacggcgagcgacgcctctctctctctctctctctctctctctctctctctctgccagtacgtgctggagtccaccgtgttcccgcgcgagcccgactgcctgcgcgagctccgcctcgccaccgccaatcaccccatgtgaggatccgattccgaggagatgtgtttgctttgttcgtgtcttggtgcggttcttgcacggtgcgtgtttgacgttttgtctgtacgggcgacgcgtgctttttttttttacgtgcagggcggtcatggcggcctcgccggatcaggtgcagctgttcggccttctgatcgagctgatcagcgccaagaacgccatcgaggtcggcgtgttcaccgggtactcgctgctcgccaccgccctcgcgctccctgacgacggcaaggtcaggatcgctaccaccgttcgttcctttgctagcaatagcaatcatcttgttctcttgatgtccgtccatggtggcagatcgtggccatcgacgtgagccgggagagctacgacgaggtcggagcgccggtgatcgacaaggccggcgtggcgcacaaggtcgacttccgcgtcggcctcgccatgccggtgctcgacgagctcgtcgccgaggtacagtacactacaccgtctcctccgaccgacattaccattaccgctcgtaatctgcttgttctttttcttttgtgcaggaggggaacaaggggaggttcgacttcgcgttcgtggacgcggacaaggtgaacttcctcggctaccacgagcggctgctgcagctggtcagggtcggcggcctcatcgcctacgacaacacgctgtggggcggctcggtggcggcgccgccggcggcggccgacgaggcggtgccgtcggggcgggaccgctcgctcgccgcgctcgccagggagttcaacgcggcgatcgccgccgaccgccgcgtcaagccgtgccagctcgccatcgccgacggcgtcatgctctgccgccgcgtggcctgaccaccacaacacaccgatcccctctccatggatgtacttttcagaaagtgcgttgggtaaaagtaaaaatgaataaaagttgctactacttggactcttttagtcataaaatataaaaatttggatgatgtgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0481400, RefSeq:Os09g0481400