Os07g0659500
| Gene Name |
Os07g0659500 |
|---|---|
| Description |
Non-SMC condensin subunit, XCAP-D2/Cnd1 family protein |
| Version |
NM_001067061.1 GI:115473854 GeneID:4344170 |
| Length |
8377 bp |
| Definition |
Oryza sativa Japonica Group Os07g0659500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:28451279..28459655 |
| Sequence Coding Region |
28451773..28451785,28451968..28452052,28452129..28452305,28452504..28452699,28452816..28452967 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:28451279..28459655 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:28451279..28459655 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgccgcccttcgtcttcccctcgaccctccgggacctggagcgggacggagacggcggcggcgacgacgagccggccctccgcccgcagaaccccgtcgccgtcggcgcactccgcgccgccgacctcgaggagttcgtcaaaggcacatcgtttgacctgtctgacaaggaactcttctgcatcgaggagcaggacgtgtttgaccgcgtctattccctcgtgcgtgacttcacttgcttgccccctgccctcaagttcaaccttgttgagaccttgcgctccaatcttagtgttctcctcccaaacatagactccctttcacgagcttccatgtcatccccttctgatgggatcccagtaactgatcgcattgcttcgcatcggaatgcccttaagatctactccttcttcctcctctccattgttgttgctgaagaatcgggagctgatagttgcaatggccctaaggtggcagtacatggtcggaagaagaatgctgtatatgcttggaattgggaagcacaaagaggccgcatcatgaatcttattgctaattcacttgaagttgacctatcactattgtttggtccaggcggtgctgatgaacaatatctctcttttgtttcaaagtgtacttttgttctctgtgagaaccagaacgtgctgaaagatgaggaaataagaaatggcttgtgccgaataattggtgcaattgctacgaagcatcaaagagtatctcaaacaagtgcatctgtcttgcatttgattcataaatttgatttcactgtcgtgcttctagcggaatcagttgctgctgcagagaaaaggtttggtgatggaagccttgcgattttgctgataagggaaataggtcggactgacccaaaagattatgtaagagatagtgccggtgctgacaatgccgggagattcctagtagaacttgcagatcgcttgccaaagctcatgtcaaccaatattggtgttctgatacctcattttggtggggaatcatacaagattagaaattctcttgttggggtcttgggcaagctggctgcaaaggccttcaaagatgttgaaggcgatagtgacgcccattctttaaggctccgaagtaagcatgctatgctggaaattttgcttgaacgttgtcgagatgtgtctgcatacacgaggagtcgtgtgcttcaggtatgggcagagctgtgtgaagaaaatgctatttcaattggcctgtggaatgaagtggcatcagttgcttcgggcagactggaggacaagagtgcaattgtgagaaaatcagcactgcaattactcatcacaatgctgcagcacaatccttttgggcctcaactaaggactgcaacctttgaggcaactctagaaaggtacaaggagaaattgcaaggaatggagcctccttctcccgagaaggatgagctcttgaatgattcttcactgggtgaagtgattgcagggcaggatgaaagtgtcagtgatagctgtttaccttctagtcaagacccaaaggatcaagatcccacaattgtggatataacaaacttggaacagattagagctttagttgcatcacttgaggctggtctgagattctcggcatgtataacttcattaatgccaactcttgtccagttgttggcatcgtcttcagccactgatgttgagaacacaattcttctattaatgagatgcagacaatttcagattgaaggttcggaagaagccctccggaaaatgttacctctggtattttctcaggataagtcaatatatgaagctgtggagagtgcattcatcactatatacacaaagaaaagtcccacggaaacagccaaaagtttattaaaccttaccattgaatgcagcattggtgaccttgctgcccttgaaagcttagttagttcattggtatcaaaaggagaaatttcatccaacacgataacagccctgtgggattatttttgctttcacatcaatggtgtgaaaccagtgcaaagccgtggagctttatcgattctttgcatggcagcaaagtcatctcccagcattttgggtactcatttgcaagatattattgatattgggtttggacgctgggctaaggaggagcctctgcttgctagaactgcatgcattgccctgcaaagattatccaatgaagacaaagtcaaattaattagtactggtagtagggtattcgctgcattgcaaggcctgataactagcctctcacttcctgagaaaatatggtatggagccgcagataaagctataagtgccatctacgctttacacccagcacctgaaatcttcgctgctcagattgtaaagaaatcacttaattctgtattcggtgtcttaggaactgattgcatgtcaaatgaaaatgaaactcagaatggttccatgctgtcatcgacaccagccacaaatctgggcagatttcttttcattattagtcatatagcactgaatcatttggtttacattgagacttctgttaagaaaattcagaaacagaaacggaagaatgacaaatcagagcctactgccgaggatcttcaggcagatgcctccaaaaattcggaggcacaaggtataaatgctgagttgggaattggtgcatctgtagatattgcaatagagtccctcgctgaaaaggcagaaagggagattgtgtccaattctgaaaagaatcttattggatactgtgcaccatttctcgcaaaactctgcaggaacctggctttgcttcaaaagtttccagggttacaggcctctgcaatgcttgctctttgcaagctaatgattattgatgcagaattctgtgaagcaaatcttcagatcctatttactgctgctgagagcgcgccttctgaagttgtccgatcaaactgcactatagctcttggtgatttagtggttcgctttccaaacctcttagaaccttggacagagcacatatatgcacgcttacgtgatccttcggcatctgtgaggaagaacactgtgcttgtcatttcacatcttatattgaatgatatgatgaaggttaaaggctttattaatgaaatggccgtaaggatagaagatgaagacgagaggatctcaagccttgcaaaactcttctttcatgagttatcaaagaaaggcatcaatccaatttataatcttcttccggatatcctgggtagattgtgcaatcaacaactcaaggatgaaacgttctgcagcattatgcaattcttgatcagctctattaaaaaggacaaacaaatggaagctcttgtggataagctctgcaatagatttgctggtgtaaatgatgttagacagtgggagtatatatcctattgcctttctcagctgactttcacagagaagggtttgaaaaaactagttgataatttcaagatatttgagcatgcattatctgaagattctgtaatgaaccacttcagaactgtgatagcaaagtgcaagaagtttgccaagccagatctcaaagtttgcattgaggaatttgatgagaaactcagcaaggttcatcaggaaaagaaagagcaagaggccacgaccaggaatgccgaggcacacaaacaaagaattggttcacttgacaaactcatggtaactaagagaactgggaaggataagggaaaatctgctgaagtggcagaggaaactagtgaggtagttgatccatcaacggagagcaattctgaagataaggagaacatgccagaatgcagtgacaatatttgttcggaaaagagtcatacatcatccacgtttacagaatcagacggtgacagcacagaggttcaatcagcgagaacttcttgcaaaggcgtgtcgcgttcaaggataaataaaatgagagaaccggaagactcagaagacagtgctccaatgagacgtgtgtctcgcagaagaccagttaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAPPFVFPSTLRDLERDGDGGGDDEPALRPQNPVAVGALRAADL EEFVKGTSFDLSDKELFCIEEQDVFDRVYSLVRDFTCLPPALKFNLVETLRSNLSVLL PNIDSLSRASMSSPSDGIPVTDRIASHRNALKIYSFFLLSIVVAEESGADSCNGPKVA VHGRKKNAVYAWNWEAQRGRIMNLIANSLEVDLSLLFGPGGADEQYLSFVSKCTFVLC ENQNVLKDEEIRNGLCRIIGAIATKHQRVSQTSASVLHLIHKFDFTVVLLAESVAAAE KRFGDGSLAILLIREIGRTDPKDYVRDSAGADNAGRFLVELADRLPKLMSTNIGVLIP HFGGESYKIRNSLVGVLGKLAAKAFKDVEGDSDAHSLRLRSKHAMLEILLERCRDVSA YTRSRVLQVWAELCEENAISIGLWNEVASVASGRLEDKSAIVRKSALQLLITMLQHNP FGPQLRTATFEATLERYKEKLQGMEPPSPEKDELLNDSSLGEVIAGQDESVSDSCLPS SQDPKDQDPTIVDITNLEQIRALVASLEAGLRFSACITSLMPTLVQLLASSSATDVEN TILLLMRCRQFQIEGSEEALRKMLPLVFSQDKSIYEAVESAFITIYTKKSPTETAKSL LNLTIECSIGDLAALESLVSSLVSKGEISSNTITALWDYFCFHINGVKPVQSRGALSI LCMAAKSSPSILGTHLQDIIDIGFGRWAKEEPLLARTACIALQRLSNEDKVKLISTGS RVFAALQGLITSLSLPEKIWYGAADKAISAIYALHPAPEIFAAQIVKKSLNSVFGVLG TDCMSNENETQNGSMLSSTPATNLGRFLFIISHIALNHLVYIETSVKKIQKQKRKNDK SEPTAEDLQADASKNSEAQGINAELGIGASVDIAIESLAEKAEREIVSNSEKNLIGYC APFLAKLCRNLALLQKFPGLQASAMLALCKLMIIDAEFCEANLQILFTAAESAPSEVV RSNCTIALGDLVVRFPNLLEPWTEHIYARLRDPSASVRKNTVLVISHLILNDMMKVKG FINEMAVRIEDEDERISSLAKLFFHELSKKGINPIYNLLPDILGRLCNQQLKDETFCS IMQFLISSIKKDKQMEALVDKLCNRFAGVNDVRQWEYISYCLSQLTFTEKGLKKLVDN FKIFEHALSEDSVMNHFRTVIAKCKKFAKPDLKVCIEEFDEKLSKVHQEKKEQEATTR NAEAHKQRIGSLDKLMVTKRTGKDKGKSAEVAEETSEVVDPSTESNSEDKENMPECSD NICSEKSHTSSTFTESDGDSTEVQSARTSCKGVSRSRINKMREPEDSEDSAPMRRVSR RRPVR</aaseq> |
| Gene Sequence |
<dnaseqindica>7871..7883#7604..7688#7351..7527#6957..7152#6689..6840#6087..6144#5885..5996#5682..5785#5349..5571#5193..5260#4932..5102#4178..4828#3243..3434#2015..3155#1767..1927#1355..1680#94..241#attcccccatccttctctctctccacctaaggctcgaatcgaagccgacctcctcctccgctcgccgccgccgccggcgtcgtccgcggcgagatggcgccgcccttcgtcttcccctcgaccctccgggacctggagcgggacggagacggcggcggcgacgacgagccggccctccgcccgcagaaccccgtcgccgtcggcgcactccgcgccgccgacctcgaggagttcgtcaaaggtataaaacccgctccccaccacctccgcttcctctcgaaatcactccatcgcttgccgtaaatcgatggtttggttgtggcgtgcggtggagctgagattgtttctcctgtatcgttcgcttcgtattggtggttgtaaagtgtaaaccctagttcccgttaatttggcctcccgcgctctactcctagtttggttcttgcatgtatttaagacccaattaaagtcaaatccctgtgattctgtggaataagagttgtggactgttgatagacatttttggcgcaagattttgctgcatttagcctgtagagtcatttcaaagctaactattgcaaggcatatcctttttagaattttttttcatcttgctccttggccattttcatcgaagtggattgtttatttgttttgcttttagaatctgcagctttggatatgacagggtttagctagctcatgtgtagtaatggaactaacaattgagtgttcttgcttttgacaaaaggttcggcctctatttgtgtcccacaaaaaaaagttttttcttctacatgttaaaattcgttagaccagggagctttgtggcatgtagggaaattaatgcacatgtttgtaagaaaaacatgcacattcatctgtgcatctgtaaatatttcaaactgtgaaatgataccatccttacctagctctgggctatgaatgccttttgtaagtttcatctccattcctcttcctggaaaagtttgtttttattttaggcattcacatcaccaaaactgacgattcattcaaggacatcagacaaaaagttttagtcccattcatctattcatccaaacttacaaagcttttactgggctaaaatttctcaatgtgcattttgtcacaaactagtgcatattaagcttaatgtaagctgcatgtggtttgttcagcaaagtattcaatttatctcacaatcaaagtactaactcttattgaatcaattttgtaatattccaccctgtttgaatgagcgtgcagctgtgcattttacatcgtgtatcttttgaaccaaaggttttctctgaacgagctaattctttctttcattttttttcttaaattataggcacatcgtttgacctgtctgacaaggaactcttctgcatcgaggagcaggacgtgtttgaccgcgtctattccctcgtgcgtgacttcacttgcttgccccctgccctcaagttcaaccttgttgagaccttgcgctccaatcttagtgttctcctcccaaacatagactccctttcacgagcttccatgtcatccccttctgatgggatcccagtaactgatcgcattgcttcgcatcggaatgcccttaagatctactccttcttcctcctctccattgttgttgctgaagaatcgggagctgatagttgcaatggccctaaggtaatacctgtgcaaaagttacaatttatttggactctttgtacccttctaattttaactgaacttattatgccatgtggacttaggtggcagtacatggtcggaagaagaatgctgtatatgcttggaattgggaagcacaaagaggccgcatcatgaatcttattgctaattcacttgaagttgacctatcactattgtttggtccaggcggtgctgatgaacaatatctctcttttgtttcaaagtaaattcaagaaactagctgtgttatgctttctgtattcattccttatagagttatagtgatgttgctttggatgaatatgtgtaggtgtacttttgttctctgtgagaaccagaacgtgctgaaagatgaggaaataagaaatggcttgtgccgaataattggtgcaattgctacgaagcatcaaagagtatctcaaacaagtgcatctgtcttgcatttgattcataaatttgatttcactgtcgtgcttctagcggaatcagttgctgctgcagagaaaaggtttggtgatggaagccttgcgattttgctgataagggaaataggtcggactgacccaaaagattatgtaagagatagtgccggtgctgacaatgccgggagattcctagtagaacttgcagatcgcttgccaaagctcatgtcaaccaatattggtgttctgatacctcattttggtggggaatcatacaagattagaaattctcttgttggggtcttgggcaagctggctgcaaaggccttcaaagatgttgaaggcgatagtgacgcccattctttaaggctccgaagtaagcatgctatgctggaaattttgcttgaacgttgtcgagatgtgtctgcatacacgaggagtcgtgtgcttcaggtatgggcagagctgtgtgaagaaaatgctatttcaattggcctgtggaatgaagtggcatcagttgcttcgggcagactggaggacaagagtgcaattgtgagaaaatcagcactgcaattactcatcacaatgctgcagcacaatccttttgggcctcaactaaggactgcaacctttgaggcaactctagaaaggtacaaggagaaattgcaaggaatggagcctccttctcccgagaaggatgagctcttgaatgattcttcactgggtgaagtgattgcagggcaggatgaaagtgtcagtgatagctgtttaccttctagtcaagacccaaaggatcaagatcccacaattgtggatataacaaacttggaacagattagagctttagttgcatcacttgaggctggtctgagattctcggcatgtataacttcattaatgccaactcttgtccagttgttggcatcgtcttcagccactgatgttgagaacacaattcttctattaatgagatgcagacaatttcagattgaaggttcggaagaagccctccggaaaatgttacctctggtaatgcctccctggaagtgtaggttgtttgtgaatatgagttagaatgtacacttcgtcacttccttatcttcataaattttgcaggtattttctcaggataagtcaatatatgaagctgtggagagtgcattcatcactatatacacaaagaaaagtcccacggaaacagccaaaagtttattaaaccttaccattgaatgcagcattggtgaccttgctgcccttgaaagcttagttagttcattggtatcaaaaggagaaatttcatccaacacggtgcactcttgtttcccttcaaagtttgctcatagcaacctttcaaatgctattttttacagtttagttacagtaatgctaagtactccccccattccaaaatatagggcacaacgattttttcccctaatgttgcataatacgaggttcgcatgcatgcgtgcatgctattgactagcacctccccctcctctaagttctatttttaaagcctctaccctcaagatctctgatctctaatcccattgggtgcatgcattttatttattgggatgatccaaattagaaggtgataataattttttcttggtttttgcgtaagagatagttgctcattatattttggaatgtaggggagtactcatttattctagcacaccaatctcctgtgcaccaaaagtgattctgcacatagattgagaatgcaaggtagtactaacttgcaattaagtgagtgcattaattgctgaatatgcataaattaagaacttaagatgcatgcaaagaatattgctcccagtttctccactttctgatgtgaacttcccttatctagatcctacagtgggaacttttttctgttcatcttgaagtatcttttgttagctgctcatcaaaataatttatattgcctataacataacttataccattttgtcgaatgttatttatctaacttcagtgacacctattatcttttgttggggaagttcacacttgttaaatcccattgtcttttgcagataacagccctgtgggattatttttgctttcacatcaatggtgtgaaaccagtgcaaagccgtggagctttatcgattctttgcatggcagcaaagtcatctcccagcattttgggtactcatttgcaagatattattgatattgggtttggacgctgggctaaggaggagcctctgcttgctagaactgcatgcattgccctgcaaagattatccaatgaagacaaagtcaaattaattagtactggtagtagggtattcgctgcattgcaaggcctgataactagcctctcacttcctgagaaaatatggtatggagccgcagataaagctataagtgccatctacgctttacacccagcacctgaaatcttcgctgctcagattgtaaagaaatcacttaattctgtattcggtgtcttaggaactgattgcatgtcaaatgaaaatgaaactcagaatggttccatgctgtcatcgacaccagccacaaatctgggcagatttcttttcattattagtcatatagcactgaatcatttggtttacattgagacttctgttaagaaaattcagaaacagaaacggaagaatgacaaatcagagcctactgccgaggatcttcaggcagatgcctccaaaaattcggaggtattttatttcttagtttgctttgtggcctaatcgattttgggttaccattctttcgtctgagtgtgtattgcacttctcttttactgtgtgatgctggcaggcacaaggtataaatgctgagttgggaattggtgcatctgtagatattgcaatagagtccctcgctgaaaaggcagaaagggagattgtgtccaattctgaaaagaatcttattggatactgtgcaccatttctcgcaaaactctgcaggaacctggctttgcttcaaaaggtcctaatttgtattgagcttcctttattttcttaatgttttgactctactactctctgttttttgttccttacttttttgttaatgcagtttccagggttacaggcctctgcaatgcttgctctttgcaagctaatgattattgatgcagaattctggtaagtatatatttatattccagctgtttcaccttttcaatatgatgtgctccagatatttatattccatcaaatgctcaactttcagtgaagcaaatcttcagatcctatttactgctgctgagagcgcgccttctgaagttgtccgatcaaactgcactatagctcttggtgatttagtggttcgctttccaaacctcttagaaccttggacagagcacatatatgcacgcttacgtgatccttcggcatctgtgaggaagaacactgtgcttgtcatttcacatcttatattgaatgatatgatgaaggtctctctctctctctctctctctctctcgtgtgtgtgtgtgtgtgtgtttgttcgaacaccatgcccctctcagttttatatttaaacatctttgcaaaatatttataggttaaaggctttattaatgaaatggccgtaaggatagaagatgaagacgagaggatctcaagccttgcaaaactcttctttcatgagttatcaaagaaaggcatgtccagcaaatgtgtcggtcaaataaattgcgtaacttgaatatacatgtttgacttatctgacgtttagttctttttctttttgatctttttaggaagcaatccaatttataatcttcttccggatatcctgggtagattgtgcaatcaacaactcaaggatgaaacgttctgcagcattatgcaattcttgatcagctctattaaaaaggtataagcataactttttttctgttttcagcaattactatgctttaactgtactttgagtaactatatacatttctaactgcattctcaggacaaacaaatggaagctcttgtggataagctctgcaatagatttgctggtgtaaatggtactatgcatataccttgcatctatattcgttcgagctttcccatctaaggctaatcaactaccattgcttctgtattcaagataccatgacataaataatattacttcctccgtttcatattataagattttctagcattgcccgtattcatatagatgttaatgaatctaaacatatatatgtgtctagattcattaatatctatacgaatgtagacaatgctagaaagtcttataacctgaaacggaggtagtaaatgagtggcaatgatatttacatggaaaatgtgagcacacatcagaaacggaatgttgtgatgcagcattcttgttctttgttgcaaccttgtagtggagtggcttttgcataagctagcaatatgggaagctagtgagccaatttgatttattttcactcctttcattttaatcctgtcttgagatttctgaattttcacatgcaatatttcaacatttatgaatgattgaattgttgtgatcccattttcagatccttgacctttctttttgttgtgtttcagatgttagacagtgggagtatatatcctattgcctttctcagctgactttcacagagaagggtttgaaaaaactagttgataatttcaagatatttgagcatgcattatctgaagattctgtaatgaaccacttcagaactgtgatagcaaaggttggtgctcagtagcctaggctgaatggatgcatatgttattatgttaaatacagcagggctgaatttgtgaactcttcaatgtttttttaatctatggtaattcctcctatcagtgcaagaagtttgccaagccagatctcaaagtttgcattgaggaatttgatgagaaactcagcaaggttcatcaggaaaagaaagagcaagaggccacgaccaggaatgccgaggcacacaaacaaagaattggttcacttgacaaactcatggtaactaagagaactgggaaggataagggaaaatctgctgaaggtacaattttttttctctgaatctccttatcatctatatcatttaagttaatctccacatgatcatccatcatgtattgactatgaactcaaacattagattagaataaggttacgctgtaaatctgtgtctataatctatacaccagaaaaattgatgcttaccttaaactgaggttcatttctttctgtctgtcagtggcagaggaaactagtgaggtagttgatccatcaacggagagcaattctgaagataaggagaacatgccagaatgcagtgacaatatttgttcggaaaagagtcatacatcatccacgtttacagaatcagacggtgacagcacagaggttcaatcagcgagaacttcttgcaaaggtaacagatggttgcactgctgatattcgcatgacacatccagtttctcaaggaatctgttccatgcattatgcaggcgtgtcgcgttcaaggataaataaaatgagagaaccggaagactcagaagacagtgctccaatgagacgtgtgtctcgcagaaggtgtttacactcactaccttacaacaatcttacttcatagtagtagtatttgtttcacgtccactaattttaaatctttctggatcattgctttgttcatactactaagcagtgctattagactcgtccttaattcctactcatgaattactaagaaatgcatttgcttacaaactttgcagaccagttaggtgatgccgaactgtaatatggaccaggtggcaacaactcctctctgggaagatctcgccttgagatcttggagttctgaagcaactggtctccctggcgcttgtcccaccagaaactctatctaacgccgatatatttgttgaatcataatgtttataagcctgcgttgacctgctaaatcttggtcagctccacacggaacggtttgctggatgctgatatttcatctagtaggttgcctctgattgataatccgtaattggagttcggtatctagtctccttgccccgtatgttgaattttttgttcgttacgatttgcgctgcttgaacaaatctatactcgcttggtcgaatccagaacttggtactactagagagatgtacctgtatgttgtctgtagactgtactgcctccattctcagtattggagtacatgttttaggtgtatgcaggtaaactttggatatatatgtattcctaaatgtattactagc</dnaseqindica> 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| External Link(s) |
