BGIOSGA020038

From RiceWiki
Revision as of 16:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020038

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020038, complete gene.

LocusTag

OsI_20316

Ensembl Transcript ID

BGIOSGA020038-TA

Ensembl Protein ID

BGIOSGA020038-PA

Length

3746

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24736281..24740026

Sequence Coding Region

24736281..24737165,24738108..24738317,24738427..24738693,24739741..24739827,24739946..24740026

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24736281..24740026 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24736281..24740026 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGAGCCCTCGCCGGCGGCAGCCTCCGCCGTTGAAGACCTCGAAACTCTCCCCCTAGACTCTTCCTACTCCTCCGCCCCCGCCACTGATCCACTCCTCCGCCCGCCTGCTTCCCCGTCCGCCGCCTCCGCCGCCGCTGGTGGGGACCACGACCCCTTCGTCATCGACGACGACTTCCTCGTCGACGAGGAGGATGACGACGACGTCGGGCCCCCTGCGCCCACCGCCATCCCGCTGGTGGCCGCGGCGGCGCGGGCCCCGGAGTTCGCGCGGATCGCCGTGTCCGATCCGAAGAAGCACGCGGAGCCCACGTCGGGGGCCGCCGGCGTGATCCCAGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCCGCGTCGGGGAGGCCGAGGTCCGCGTGCGGCGGCGCTTCCGCGACGTGGTGGCCCTCGCGGACCGCCTCGCCGCGGCCCACCGCGGGCTCTTCATCCCGGCACGCCCCGACAAGAGCGTCGTCGAGGGGCAGGTCATGCAGCGCCACGACTTCGTGAACCAGCGGTGCAGCGCGCTCCAGCGCTACCTCCGCCGCCTCGCCGCGCACCCCGTCGTCGGCCACAGCCCCGATCTCCGCACGTTCCTCACCGAGCCTGGCGCCATCCCTGCCTTTGAGGGCGAGCAGCCCCGGTACTGGACCACCACGCTGAGTTCTGCGGCTCCATCGACTCCGGCAAAAGCTGGGAGAGACTTGTTTGGGATGTTTAAGGGTCTGAAACAGACGGTGGTGAACGGGATGGTTGCAACAAAGCCCCCACCGGTGGAGGAGGAGACTGACACTGAATTCCTAGCACACAAGGCTAGGTTTCAGGATTTACAGCAGCAGCTCACCACAACATCTCAACAGGCGGAAGCATTAGTTAAAGCTCGGGATGATCTTAGAACAACTACAGCTCATTTGGGAATGACATTAATTAAGCTAGCAAAATTTGAAAGAGAGCAGGCAACATGTAGTCCACAGAGAAGAAGAGCTGCTGATATCAATAATTTTGGAAGTTCTGTTGTCAAGTTCAGCAGATCACAGGCGAAACTAAATTCTGAAATTGTGAAGCACTTGGGTAGTATCCATGAATACTTGGAGATGATGATATCTGTTCATCATGCGTTTACTGATCGTTCTAATGCTTTACACCATGTGCAAAGTCTGTCAGCAGATCTATTTTTCTTGCACACCAGGGCAGAAAAACTTGAATCAGTATCATCTAGGAGTAGAAGTATAGACCAGGAGTGGACAAGGCACCAGAAATTAGGGGGATTGAAAGAAACAATAAGTGCAACAGAAGCAGCGAAAAGCCACGCACTTAAAGAATATGAAAATATTAAGGAGAACAATACGATTGAAATTAAAAGATTCGATAAGGATAGGCGTCGAGATTTTGTGCAGATGCTGAAGGGATTTATTGTAAATCAGGTTTCATATTCAGACCATTATGCTAATATGTGGGCAAAGGTAGCAGACGAAACTAAAGTGTATGCAAAAAGGAGCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAAEPSPAAASAVEDLETLPLDSSYSSAPATDPLLRPPASPSAASAAAGGDHDPFVIDDDFLVDEEDDDDVGPPAPTAIPLVAAAARAPEFARIAVSDPKKHAEPTSGAAGVIPGSGSYFSYLITTRVGEAEVRVRRRFRDVVALADRLAAAHRGLFIPARPDKSVVEGQVMQRHDFVNQRCSALQRYLRRLAAHPVVGHSPDLRTFLTEPGAIPAFEGEQPRYWTTTLSSAAPSTPAKAGRDLFGMFKGLKQTVVNGMVATKPPPVEEETDTEFLAHKARFQDLQQQLTTTSQQAEALVKARDDLRTTTAHLGMTLIKLAKFEREQATCSPQRRRAADINNFGSSVVKFSRSQAKLNSEIVKHLGSIHEYLEMMISVHHAFTDRSNALHHVQSLSADLFFLHTRAEKLESVSSRSRSIDQEWTRHQKLGGLKETISATEAAKSHALKEYENIKENNTIEIKRFDKDRRRDFVQMLKGFIVNQVSYSDHYANMWAKVADETKVYAKRSN</aaseq>

Gene Sequence

<dnaseqindica>1..885#1828..2037#2147..2413#3461..3547#3666..3746#ATGGCCGCGGAGCCCTCGCCGGCGGCAGCCTCCGCCGTTGAAGACCTCGAAACTCTCCCCCTAGACTCTTCCTACTCCTCCGCCCCCGCCACTGATCCACTCCTCCGCCCGCCTGCTTCCCCGTCCGCCGCCTCCGCCGCCGCTGGTGGGGACCACGACCCCTTCGTCATCGACGACGACTTCCTCGTCGACGAGGAGGATGACGACGACGTCGGGCCCCCTGCGCCCACCGCCATCCCGCTGGTGGCCGCGGCGGCGCGGGCCCCGGAGTTCGCGCGGATCGCCGTGTCCGATCCGAAGAAGCACGCGGAGCCCACGTCGGGGGCCGCCGGCGTGATCCCAGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCCGCGTCGGGGAGGCCGAGGTCCGCGTGCGGCGGCGCTTCCGCGACGTGGTGGCCCTCGCGGACCGCCTCGCCGCGGCCCACCGCGGGCTCTTCATCCCGGCACGCCCCGACAAGAGCGTCGTCGAGGGGCAGGTCATGCAGCGCCACGACTTCGTGAACCAGCGGTGCAGCGCGCTCCAGCGCTACCTCCGCCGCCTCGCCGCGCACCCCGTCGTCGGCCACAGCCCCGATCTCCGCACGTTCCTCACCGAGCCTGGCGCCATCCCTGCCTTTGAGGGCGAGCAGCCCCGGTACTGGACCACCACGCTGAGTTCTGCGGCTCCATCGACTCCGGCAAAAGCTGGGAGAGACTTGTTTGGGATGTTTAAGGGTCTGAAACAGACGGTGGTGAACGGGATGGTTGCAACAAAGCCCCCACCGGTGGAGGAGGAGACTGACACTGAATTCCTAGCACACAAGGCTAGGTTTCAGGATTTACAGCAGCAGCTCACCACAACATCTCAACAGGTTCGTGCAATTTTACTTTACCTCCGTGAGGGGCAGCACATTTTGTGTGGGCAATCCAAACAATTTGTTGTATGGCACCGCAAAGATTTCAAGCTACATGTTAATGCATGTGAACCAACTCCCTGTGCCTCTAATGCTTTAACTACATAACCACCACAATACCACAGAAACTTGTATGCCAATATGTGTCATGCGACCATCTCTGCGATTTATGTTTCTTTATGCAGTTTTTATGAATTGCCAGCATAGTTATAACTCTGTACCAAGTGTACTGTTTTATCTGAAGAACTTTTTGTGGAAGGACTAGAGGAGTTAAGCCCTTTAAATCACTAATTAGTACTCCAGAACCCATTTTGTGGGAGGACTACAGGAGTAGTTGTAATATTACCAGAAGTCCAGAACTCATGCTGATTTCCAAACCCCCTCAAAACTTTAGCATCCGTTTTATTCAAGTTGAAGTCAGATTCAGAGGCCATGGGCCAAAAAACCTGAACACATATTCATCAAACAAACACATTTATATTTTCTTGTGTGGGCATCTTAACTTCATATTTGCAATATATTTTACTCTAGCCTGTAATTTACCTGATTGATCTCAAGGTATGTTTATTTTTTCTCCTTTTGCAAAGTAGTGAAAGTCGAGTGACTGTTTTTCATGGTGTTACCAAACTGTCTTATCAGAAGGCTACTATTATTGTCTTCGTCTCATGGATGTGGATTGTGGAAGTCATGTTCCGTAGCAAATAACATAAAATATTTCTTTTGCATTCCAAAAGTATTATTAGGATGAAGTTGTGTTATTTTACGGTGAATGGATGTCCTAGTTAGAAGTAGCATTGCATTACTTTCTCCTTTTGGATTCTTTTAATATTCTGCACAGTGAGCCTCAGATTGGTTCATGAAGCTATTGTTGTTGAAATTCTGTATTTCCATTTTCTGTAGGCGGAAGCATTAGTTAAAGCTCGGGATGATCTTAGAACAACTACAGCTCATTTGGGAATGACATTAATTAAGCTAGCAAAATTTGAAAGAGAGCAGGCAACATGTAGTCCACAGAGAAGAAGAGCTGCTGATATCAATAATTTTGGAAGTTCTGTTGTCAAGTTCAGCAGATCACAGGCGAAACTAAATTCTGAAATTGTGAAGCACTTGGTATGTGAAAATTTCTGCAGACTCAAACAGAGCAAGCAGTTATTTGGTACCATTCCTTGAAATTGCTTTTGTCTTAGATTATAACAAGATATTATTTATTCTTTTTCAGGGTAGTATCCATGAATACTTGGAGATGATGATATCTGTTCATCATGCGTTTACTGATCGTTCTAATGCTTTACACCATGTGCAAAGTCTGTCAGCAGATCTATTTTTCTTGCACACCAGGGCAGAAAAACTTGAATCAGTATCATCTAGGAGTAGAAGTATAGACCAGGAGTGGACAAGGCACCAGAAATTAGGGGGATTGAAAGAAACAATAAGTGCAACAGAAGCAGCGAAAAGCCACGCACTTAAAGAATATGAAAATATTAAGGTAAATCACCTGAGAGCTTGAAGTGAATTGATATCAAATAAAATCACCTAAAAGCGTAAATATAAGTTGTTTTAGATGTAGAAGCAGAAGGGCATGCGGTTTGCATCTTGTGGTTTACTACTGAAAGTTTACTTATACTGTACTTAGTAAAGTTATAGCTTCTATTTGATTTAACCGCATATGCTATGGTTAATACATCTAGCAATATAAATCATGCTAAAGGTTATTCTTGTGAATATTTCAAAAACATGGTCAGATAGTCTTGCTAGTTAGAAGAAACATATTTTTGAAGCTTAATATAAATATGATATCACATTTAATTTTAGTACTGTCTAGTATCCTTGTCATTTTTATACCCGATGTTACTTAAGCTAGTCTGCTGGCAGAGAAGATCAGTATGAGTCATGCAGTATGGCACCATGACCTGCATTTATGTAGCTTAGGATCCTGCAATATTTTTGCTGCCTGATAAATACCAACTTAAATTACTAGAAGGGAAATACTGAGATAGTGAATTCAATGTTCTTCTATTTTTATTTTCTAGGAAATCAGGTTAAGATTGTTGTTATTATGGTGTCAATTGTAGCTAACTTGCAGTTTAGTAACTAATTCATTTGCTCACAAGGACTTTTTTTTTGGCTTTTATAGCTTCTTTGTACTGTACTTGTTAATGCAGTTTTATATTCCCATGAAGAAAACATTAGCTTAAACTGGAAATATACAAAGATGGAATGTGTTTAATTTAGTAGAACACAAGTTAAATTCAATATAGAGCATATGCAAATACAAATTTACCTCCAAATTTTCAAGAGCTTTCTCAAATTTAAGTGGCAATTCAGGTATGCAGCGCATATGCATACTAGTTACTAGGTTTTGTACTGGCAGTACAACCTTTACAAATCCTGGATGCGACGTGGCCTTCGTCTTCTTGGGCCATATTCTTTATAGTATAGCATTATATATTTATGCTCCCTTTTGGATTTCCAACCTGTACTTTTTTCAGGCTGTGCAAATTACCATACAAATCCTTTTTTTTTATGATTTCAGGAGAACAATACGATTGAAATTAAAAGATTCGATAAGGATAGGCGTCGAGATTTTGTGCAGATGCTGAAGGGATTTATTGTAAATCAGGTATAAGAATGCTCCACTAGTATTTGGCGAGACACCATGATTATTACACTGTATTTATCCGTAGTGAAAGAAGAGGTGTATACATGTCAATAACATTGGTATATATTACTGTGTGCAGGTTTCATATTCAGACCATTATGCTAATATGTGGGCAAAGGTAGCAGACGAAACTAAAGTGTATGCAAAAAGGAGCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020038