BGIOSGA020088
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA020088 |
|---|---|
| Description |
cDNA clone:J033072O04, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA020088, complete gene. |
| LocusTag |
OSJNBA0088I06.2 |
| Ensembl Transcript ID |
BGIOSGA020088-TA |
| Ensembl Protein ID |
BGIOSGA020088-PA |
| Length |
5184 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25528474..25533657 |
| Sequence Coding Region |
25528474..25528615,25529449..25529522,25529686..25529769,25529850..25529930,25530652..25530732 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome05:25528474..25533657 source=RiceIndica05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome05:25528474..25533657 source=RiceIndica05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGAGGGGTTCCTGCAGAAGCTGAAGGGGCTGGACGCGTACCCCAAGGTGAACGAGGACTTCTACAAGCGGACGCTCTCCGGCGGCGTCGTCACGGTCGTCGCCTCCGTCGTCATGCTGCTGCTGTTCGTCTCCGAGACCCGGTCATATTTTTATTCAGCAACAGAGACTAAGCTAGTGGTTGACACATCAAGAGGGGAAAGGCTACGAGTTAATTTTGACGTAACTTTTCCGAGTGTTCCCTGCACCCTTCTCAGTGTTGATACCATGGATATTAGTGGAGAGCAGCATCATGACATTAGGCATGATATAGAAAAGAGGCGATTAGACGCACATGGTAATGTCATTGAGGCTAGAAAAGAAGGCATTGGTGGAGCAAAGATAGAGAGTCCATTGCAAAAACATGGAGGAAGACTCAGCAAAGGTGAAGAATACTGTGGCACGTGTTATGGTGCTGAGGAGTCGGATGAACAATGCTGTAATTCTTGTGAAGAAGTTAGGGAAGCATATAAGAAGAAAGGATGGGCCCTTACAAATCCTGATCTGATTGACCAGTGCACCAGAGAAGATTTTGTGGAAAGAGTTAAAACTCAACAAGGTGAAGGTTGTAATGTACATGGCTTTTTAGATGTCAGCAAAGTTGCAGGGAACTTACACTTTGCTCCAGGCAAAGGATTTTATGAGTCAAATATAAATGTGCCTGAGCTGTCGGCACTTGAGCATGGTTTCAACATCACACACAAAATAAATAAACTGTCTTTTGGGACAGAATTCCCTGGTGTTGTTAATCCACTTGATGGTGCTCAGTGGACACAACCAGCATCAGATGGGACATACCAATACTTCATAAAAGTTGTTCCTACAATTTACACTGATCTAAGAGGGCGCAAGATTCATTCCAACCAATTCTCAGTAACAGAGCATTTTAGAGATGGGAATATTCGCCCCAAACCCCAGCCTGGAGTATTTTTCTTCTATGATTTCTCACCCATAAAGGTAATATTTACAGAAGAAAATAGTTCCCTGCTCCACTATCTGACGAACCTATGTGCTATAGTGGGAGGGGTTTTCACCGTCTCCGGCATCATTGACTCGTTCATATATCACGGGCAGAAGGCACTCAAGAAAAAAATGGAGCTAGGCAAGTACAGATGA</cdnaseq> |
| Protein Sequence |
<aaseq>MEGFLQKLKGLDAYPKVNEDFYKRTLSGGVVTVVASVVMLLLFVSETRSYFYSATETKLVVDTSRGERLRVNFDVTFPSVPCTLLSVDTMDISGEQHHDIRHDIEKRRLDAHGNVIEARKEGIGGAKIESPLQKHGGRLSKGEEYCGTCYGAEESDEQCCNSCEEVREAYKKKGWALTNPDLIDQCTREDFVERVKTQQGEGCNVHGFLDVSKVAGNLHFAPGKGFYESNINVPELSALEHGFNITHKINKLSFGTEFPGVVNPLDGAQWTQPASDGTYQYFIKVVPTIYTDLRGRKIHSNQFSVTEHFRDGNIRPKPQPGVFFFYDFSPIKVIFTEENSSLLHYLTNLCAIVGGVFTVSGIIDSFIYHGQKALKKKMELGKYR</aaseq> |
| Gene Sequence |
<dnaseqindica>1..142#976..1049#1213..1296#1377..1457#2179..2259#2378..2470#2969..3145#3229..3296#3424..3475#3577..3630#3713..3802#4734..4800#5093..5184#ATGGAGGGGTTCCTGCAGAAGCTGAAGGGGCTGGACGCGTACCCCAAGGTGAACGAGGACTTCTACAAGCGGACGCTCTCCGGCGGCGTCGTCACGGTCGTCGCCTCCGTCGTCATGCTGCTGCTGTTCGTCTCCGAGACCCGTAAGTGTGTGTGCGCGAAGCAGCCGCCGCCGCGCGGATGTTGTGTGCTGTTCGCGTACTCTCCCATCCGTGGCCGTAATGGCTCGATGTGGTTTGGAATTCGAGGAGTTGGTTCTTGCCAACAAGATCAAAGTCGGATTTCGAGTTGTCGATGGGGATGGGGATTTAGAGTAAGATTTGAATTCAATGATGCGGTGGGCGTGTTCCTGCTGCTGCTGCATGCTTGAATGTTTGGAATATTTCCAGGGGCACCTGACCGCGCTCTTGGTAATTTCTAGAAGAAGGTGCCCTTTTAGGTAGACAGGTTTTGCGGTGTGTCAGGGTAACGAACTAAAGATGGGCATGTTGCGATGGGCATTGACGCTAATGGTGATGTATGCTGCGCGCGATTTTTCTTTTCTTTTTCTTTTTCCTTTTCGGGTGTGAGATTCCTGAAAAGTTCAGGAATGCTTTTGGCTGAGTTCCTGCGTCTCTGAGGAAGATAAATTAGTTTATTTTTTTCTGCTATTACTTGGATTTATGTGCTGCTATCACTGTTGGTTCGTGAAGGGTAAGTTTTTGTGTTGTTGGCTCTGCATGTTGGATCATGCGTGCAAAATTAGGTCGTCACAAGGATTATGCCGTTTTCAAGTTACCTTTTGAGTAAAGTCTGTTGTTGCAAAGGTTCTGTTTTATTTGGCCAGCATGGCCTTACATTACTTTGGAGTTTGGAGAACAAGAGGTTACAAGTTGTCGAATTTTTATGCTCTTTTTGTTTGGTGCAATTTGTTAGTGTTTATTTTTTTAAAAAAATTCTGGTAGTGAGAAGGTTCTTTCATAAAATGTTTTTGCAGGGTCATATTTTTATTCAGCAACAGAGACTAAGCTAGTGGTTGACACATCAAGAGGGGAAAGGCTACGAGTTAATGTTAGTATTTATTTGATTGTTAAACTAGATTCATGTCATATGTTGTACTTCTATTGTTTCTAGTATAAAATGCATACTCTTTTGTATGCTATTCACTTACAATCTGTTGGGAACTAGGTGTGAATATTTCCTGTTAACTTCTAATGCTAAAACTGTTTTGCAGTTTGACGTAACTTTTCCGAGTGTTCCCTGCACCCTTCTCAGTGTTGATACCATGGATATTAGTGGAGAGCAGCATCATGACATTGTACGCACTTATGCTATATCATCTTCTAATTCTTAGTATGTGTTGATTTGTCCATCTTATTATTCCATTGTTTGTTGTAGAGGCATGATATAGAAAAGAGGCGATTAGACGCACATGGTAATGTCATTGAGGCTAGAAAAGAAGGCATTGGTGGAGCAAAGGTTGGTGATCACTGCTTTAGTTACACTTTGAGGTTGAGCTCATTAATAAACTAAGTGATTCCCCGCGCTTTGCTGCGGGAATTACCAAACAATTCTCAATATATATTTTTCGACAATCAAGATAGCAGTAAAAAGGAAAAAAATAATGAAACATCAGGGTTTATCGGTACTTATCATGAAACAAACAAATGATATCCGCGCTTTAATGTGAAACATATAACATATTATAAAAATGATAGATAGATTTGTTAAACTATTGTGCAAATGATGTGAGGGGTGGTGATTAGATATGCTTGCATGTTGATTTGTAGAATTAAATAAATTGCAGATGATGTTGTATGCTTGCATGTCTTAAATATGTAATAATTGCTAGTGGGTGATGATGTGACATTGTTGCATGTTGAGCTTTAGACTTAGTGAGCTATAACTTTATAGAAAGTATAGATTTAAAATATCGAACTAGAGTCGTCTGTACAAATTATTCTTGGTGACCTAGTATATTTCCCTACGATGTACAGCATTGTAGTTGTTGGAAAACAAGTGGAAATTTAAGTACTTAAATATTTTTATTGTCAATACCTTATTTTTTACATGAGGACATAACGTGAGCATAGCATGTATAATATTACAGATTAGAATATAACCGTTTGTGGACTGTCCATATGCTGAAAACATACTCCAGTATCCACTTAAAACATTTCCTTCTTGCTGCCTTGTATAGATAGAGAGTCCATTGCAAAAACATGGAGGAAGACTCAGCAAAGGTGAAGAATACTGTGGCACGTGTTATGGTGCTGAGGAGGTATGCACAATCTTTTCTAATGGGAATGTATTTTGTTTATACCTCTTATTATTTCAGCTTTCTGAACTTACCTTGTTCTTTGTTACATTCTAACTCCGGATGGCTTTCTGGACTTCAGTCGGATGAACAATGCTGTAATTCTTGTGAAGAAGTTAGGGAAGCATATAAGAAGAAAGGATGGGCCCTTACAAATCCTGATCTGATTGACCAGGTATATTAGTTATTTTGGCATGGTTTACCTAGATATATCCATTGTTTAGATTTCCGTTGAGTTCTCTTGGGCTTAGTTTAAGTTTGGAAAATATATGTATGGCAAATAATGTTGAAGATTGCAAGATAATTAATATAGTCTATATAGAGGTAGTATCTCTTAAGAAGCCACTATTACTGGAAGTCCCTGAGAAATGATTTTATTCCTCAGTCCCATATCTGCCTTGTTTCTCTCCACTAACCAATTAGAACAACAAAAATGGCCTACTCCTGACGTAGTGGCATACCGTATAGTTAGATGCCTGTTGCGCGTATACTCTAGCCTTTCTATACTAGTATACTTGTGTCTAGTGACAAGCTAGTGTGGCACACCTCTCTTTCATGCTTTTGCTTTGCAAGGCAGGGCTCATTTATGAGTGAAAAGAGTGAGGCGACGTCATTTCTCCTACTATTTACTGGAACTTCCGCCCTACTGATTTGTTTTCCTTGGGCATGACAGTGCACCAGAGAAGATTTTGTGGAAAGAGTTAAAACTCAACAAGGTGAAGGTTGTAATGTACATGGCTTTTTAGATGTCAGCAAAGTTGCAGGGAACTTACACTTTGCTCCAGGCAAAGGATTTTATGAGTCAAATATAAATGTGCCTGAGCTGTCGGCACTTGAGCATGGTTTCAACGTAAGTAGGTCCAATAAATGTTCCTTTTCCTTAAAAGTGTTTTTATTCAGTGTTTCTGATATGTTTGTGTATAATTTTACCAGATCACACACAAAATAAATAAACTGTCTTTTGGGACAGAATTCCCTGGTGTTGTTAATCCACTTGATGGGTACGTCCATAGCTCTAGCTCATTGAGCATATAATTATAGCCTTGCACTTATTCTCCTAGTTATATATTTCTTTTTTCAATTTTTATCTTTGTACCCTCATGTCCTAACAAATTTCATGAACGTCAGTGCTCAGTGGACACAACCAGCATCAGATGGGACATACCAATACTTCATAAAAGTGAGCTCTTGTTATCCATGTTTACGTGCTTACATTTGTATCAGTTGTTTCTGCTACAAACCATCATTTGAAAAGAAACTTACTGGGTTTTGCTTAACCAGGTTGTTCCTACAATTTACACTGATCTAAGAGGGCGCAAGATTCATTCCAACCAAGTTAGTGAAGTTTATTGAATCATGTTTATACTTTATATTTTTTTTCCAAGCCTAGTGATCTTATTGTTACTTGCATTCACAGTTCTCAGTAACAGAGCATTTTAGAGATGGGAATATTCGCCCCAAACCCCAGCCTGGAGTATTTTTCTTCTATGATTTCTCACCCATAAAGGTAGTAACAATGGAGAGAAATTCGTATGTAGTCATGTTCATTTTTCTCTTTTTATGATTCTATCTTAGCTTGCTCTACTCATCTTCTCAACCTGTGGATATGTGTTGCCAAGCTCATCTGTTGAATGGCTGGCTGTGTTGGTGTGACCATTCTTGCTGCACATGCAGAATGCTCCAAATTCACCATCTGTTATTATTCAGTACTATTTAATTACTTTGGACACAAGAGAAGTCTACAATACCTTTGTTTCACCTTTATCTATTCTGACACTGCAGGACCAAACTGGAATTTGTAGGCTTTAGGTCATGGAGAGTTTCTAAAGTTAGTTATTATACTAGTCAGTAGCTAAAAGAATCAGTTCATTGATGAGATATATCTGTTAGGAGTATCCTAGCATAAAATTTGGTATTATCCTTTTATTATTTTTATTATTTGCTGAATGGCTCCAAAAATGTCTGCATATGCATCGTAACACTTTGAATACAAAATTGACAGTGCATGTCTATACTCATTCAAAAGCCTCTAGTGGTGGTGGCAGGGAATTTGCCACCCCACTATTGCTTTTTGCAGTTTTTACAAATTGTCCCCTGATATTTTTCTAATATTGTGGAATAGTTCAATATTTGGTTCAAACAAGTGAATAGCAGATAATGAAATAAACAAACAATTGATACTAAGATATTTGATAAAATATATATTTTTCTTACATATTATGATATTGTTTTTCTTCTGCCCATAGCAAAGCTTGGGCATTTTGCTAGTACTCAAAAGTCAAAACTTATACATGTGGATAACATACAGTTTCGTATCAATATAACGATTAACTAATTCTCATATTCTCTTATCAGATTGAAAGGTACTCCTTTTAAGTTTTAACTCTTTAGTTCTGTGACCCACTAAAATCTTAGTTCTCCACCTTATGTTTTTGCAGGTAATATTTACAGAAGAAAATAGTTCCCTGCTCCACTATCTGACGAACCTATGTGCTATAGTGGGAGGTATTAGCATTACCTCTATTTTATTCTCAAACTGATTAATCTTTTTTATTCTATTGTAGTGAATGAGTGTTATCTCTTCAGTCTTCACTAACAAATTCTTATAATTCTTATACATTTCACCGAAAACTCCAATGCTTATTTGACAAAGTTTATAATTAGTTTGTTACTATTTGCCTAAGTGATGAACCGTTGAAGGAATTGGCTCTGTTTATCTATGTGCCTGTGTATAAGTAATGTAGCAAACCTAGTATGGATGCAAGTCACTAAACTTTTGTCTGCCTTGTATCCTCAGGGGTTTTCACCGTCTCCGGCATCATTGACTCGTTCATATATCACGGGCAGAAGGCACTCAAGAAAAAAATGGAGCTAGGCAAGTACAGATGA</dnaseqindica> 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