Os07g0661300

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Revision as of 08:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0661300| Description = Similar to Ubiquitin-specific protease 24| Version = NM_001067071.1 GI:115473874 GeneID:4344181| Length = 3674 bp| ...")
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Gene Name

Os07g0661300

Description

Similar to Ubiquitin-specific protease 24

Version

NM_001067071.1 GI:115473874 GeneID:4344181

Length

3674 bp

Definition

Oryza sativa Japonica Group Os07g0661300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28544724..28548397

Sequence Coding Region

28544726..28545247,28545331..28545518,28546101..28546342,28546915..28547057,28547386..28547562
,28547841..28548038

Expression

GEO Profiles:Os07g0661300

Genome Context

<gbrowseImage1> name=NC_008400:28544724..28548397 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28544724..28548397 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttaagtgacggccagaacaaaatcatcattacaaaggatattgcatgcagcaacaaaaaggaaacagtagctcctacattaccaaatggcaagccagtgctattcaatggatctcccactgccaatgccaatgtgtctcccaacaatggcgtcattgagaataatcagaaggctgtagctgcagttctcacgagtgttcctgctaaaaatgtcagcagcccagcaccactttcagttccagaggtggaccatgatgggatcgaacgcaatcaaaacagcagtttagtcccagaaataactgaaaatggagggccagctattgatacaccaactactgcagctccagtggatgagcttgtgacaagcttaaataaaaaggactttcggaacaagcccttgcttcctcatggtttgaagaatacaggaaatatatgcttcctgaattcatccttgcaggcattgctctcatgctggccttttgtccagcttttacagaacttgaggaaccagaatatacctaaggctggttacccaacactgaatgcatttattgagttcatctctcaattcgacgtgctcgatgattcaaatgttaagaaagacgagaagtttgctacaatagcttcaaaatcagttattccctccatgtttgacacagttctgagaaattttactccagatgtgccagctggaacagcttctaggccaaggcaggaagatgctcaagaattcttaagttttgcgatggatagaatgcatgatgaactagtgaagcttaatggcaatggctcaaattcaaaggagggtatgattgtttcatcaaatgatgatgatgcttgggagactgttggaaagaagaacaagtcagccataatgaggagtcagagttttgttccctccgagttaactgctatttttggaggccagctgcaaagctgtgtgaaagctactggtaacaaagcatcagtcaccgttcagccttttcgactgatccatcttgacatattccccgatgctgttcagaaacttgatgatgcccttcgtctgtttgctgctcctgaatctttggaaggatacagaacagctgctggaaaggctgggttggtgacggctagaaaatcagtgaagatacactcactttcaaagataatgatactgcacctgaagaggtttagttatggaagtcatggctgcacgaaactcttcaagccaattcacttccctcttgagctggttcttagtcgtgatctgctgagttcgccatcatcagagcacatgcagagtagaagatatgagcttgttgcaaccatcacgcatcttggggcaaacccgtccaggggccattacactgccgatgcaaagtctgccagtgggcagtggcttcgcttcgacgatgataacgtcacacctgtcagtctgaacaaggtcttgcatgaccaagcatatgtcctgttctacaaacaattataa</cdnaseq>

Protein Sequence

<aaseq>LSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSPTANAN VSPNNGVIENNQKAVAAVLTSVPAKNVSSPAPLSVPEVDHDGIERNQNSSLVPEITEN GGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQALLSCWPF VQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVIPSMFD TVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNGNGSNSKEGMIVSSND DDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPFRLIHLD IFPDAVQKLDDALRLFAAPESLEGYRTAAGKAGLVTARKSVKIHSLSKIMILHLKRFS YGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYELVATITHLGANPSRGHYT ADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFYKQL</aaseq>

Gene Sequence

<dnaseqindica>3..524#608..795#1378..1619#2192..2334#2663..2839#3118..3315#aattaagtgacggccagaacaaaatcatcattacaaaggatattgcatgcagcaacaaaaaggaaacagtagctcctacattaccaaatggcaagccagtgctattcaatggatctcccactgccaatgccaatgtgtctcccaacaatggcgtcattgagaataatcagaaggctgtagctgcagttctcacgagtgttcctgctaaaaatgtcagcagcccagcaccactttcagttccagaggtggaccatgatgggatcgaacgcaatcaaaacagcagtttagtcccagaaataactgaaaatggagggccagctattgatacaccaactactgcagctccagtggatgagcttgtgacaagcttaaataaaaaggactttcggaacaagcccttgcttcctcatggtttgaagaatacaggaaatatatgcttcctgaattcatccttgcaggcattgctctcatgctggccttttgtccagcttttacagaacttgaggaaccagaatatacctaaggtgctgctatttaaacaattaagcttgatgttctaaccccgcttatttcaggctaatttttctgactacttgttgcattttaggctggttacccaacactgaatgcatttattgagttcatctctcaattcgacgtgctcgatgattcaaatgttaagaaagacgagaagtttgctacaatagcttcaaaatcagttattccctccatgtttgacacagttctgagaaattttactccagatgtgccagctggaacagcttctaggccaaggtaaaagactgttaatgcattttttttaactattagttttacttgtgtgaaagtaactcatctagttgttaatgctgataatctgatgtttggtttgtcggtgcaaattgtggatatcaatgactttttggcattttctttaacatctttagtccaacaagccatggatggcagtttatagtctggtgtttagctgatccttctagtactataatatattttgttcattctttcttaaagagctgtattgagtgtattaagttaaaaccaatggctcaatgcttacaagcatgattgcacgatgcttacgatgcttttgaacccctgactatatcctttttgttttttaaccctctgcttgaggctttgcttgtgtatcactatgatatttaggatatatgccatataaatatgaagttcattcaaacaaagtagtttgctgcatcacatatcgctgggacattgtgcatgctattctctatccatttctttgtgttgttgtagatgtccagttttaagggttcacctcaatttgcagtaagctatccttgtttcagtttatgatgctatgtacttatgcaggcaggaagatgctcaagaattcttaagttttgcgatggatagaatgcatgatgaactagtgaagcttaatggcaatggctcaaattcaaaggagggtatgattgtttcatcaaatgatgatgatgcttgggagactgttggaaagaagaacaagtcagccataatgaggagtcagagttttgttccctccgagttaactgctatttttggaggccagctgcaaagctgtgtgaaagctactggtaaaattttcttgtgcagagaaaaagcgcacactgttttggaaattttaatgtccttgctttccatgtcattactgttatggtatatctaaccaactcaacatttgcttgtgccatgtaactctataaatgatgttcctaagcatgcacgaaagttgtcagggaaatagtgtatatgcttatgcttgacaattgagattaacttaaaaaaagaaactgttatactatttatttctccctaagaagttatttgacattattaccagaatcatgggctattgtccttattttatacctggaaggtttacttcattgtcattcttctagttttactaacaagtcaaatcacacccattagtccttaaggtattactgaataccactcctacatgaatcatgtaactcaatatacctttcgcgaatatgttccccactgatcatgaactcatgactggcaaaccatttttcacagactcaaggtgaaaactgtgtttgagtgggtcaaattgtgcagtcatttgctcagctttgcttggtgagtgcagactgatggattattcttttatctgcaggtaacaaagcatcagtcaccgttcagccttttcgactgatccatcttgacatattccccgatgctgttcagaaacttgatgatgcccttcgtctgtttgctgctcctgaatctttggaaggatacagaacagctgctggaaaggtagcttgttgaaatttactctattatttgacctcttaattatgtcaccactcaaatggtttgttaattgcatgtatgtaaacttggtttttttacatgcaatggaaaatccattttgcatctactgcattttactcagtaaactatttatgaagccttccttttttaatgttaatattctgttaaagctgctatttaataagctatgttgttgaaacttctccttgtggtaccactatatttggtgctttcttcttcatatgaaagatgcaactgttatttcttgcaatgagttaaaattacaatatgtcaaactttgatcttgcaggctgggttggtgacggctagaaaatcagtgaagatacactcactttcaaagataatgatactgcacctgaagaggtttagttatggaagtcatggctgcacgaaactcttcaagccaattcacttccctcttgagctggttcttagtcgtgatctgctgagttcgccatcatcagaggtgatagtttgcccgatatggttttatacatttcctctcaaaattttgagctatctttcatttgtttcatccctccattttcctcttacagaggcaaccatgtcttggttatgcaattattgtgttattgcatatgcagtaggcttaagcttgcactccaagtttatgcacccattatggaatcacgatcatttcttagtttccaacatgctattgaatttgagacaaattgacgcttcttcaaatagttaaaatgggatctaacaacttgatttcagcacatgcagagtagaagatatgagcttgttgcaaccatcacgcatcttggggcaaacccgtccaggggccattacactgccgatgcaaagtctgccagtgggcagtggcttcgcttcgacgatgataacgtcacacctgtcagtctgaacaaggtcttgcatgaccaagcatatgtcctgttctacaaacaattataagtttgggggtattgctacggagttgattagcggttctcttattgcttgaacagctagatatatactaactatatcgcccagttaatgtagctgccgtgtaactgagaatcttgtgtcaagtgcctggtttcctgcgtttatttatatatgcttgatcacatagtgggggatttttgttcaggccattgttgaggttttgtaaaatgcaaatgtcatcttggtaatgaccattaaagtaaccatgagatgatatcactcgttagccctaagaaactatattgatcatgttattgcggtgttgcatttgattatattaaaacgtgattaaaacgtccagcttgtgagcttgacgattgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0661300, RefSeq:Os07g0661300