Os07g0662900

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Revision as of 08:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0662900| Description = Similar to 4-alpha-glucanotransferase (EC 2.4.1.25)| Version = NM_001067082.1 GI:115473896 GeneID:4344192| Length = ...")
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Gene Name

Os07g0662900

Description

Similar to 4-alpha-glucanotransferase (EC 2.4.1.25)

Version

NM_001067082.1 GI:115473896 GeneID:4344192

Length

7433 bp

Definition

Oryza sativa Japonica Group Os07g0662900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28620741..28628173

Sequence Coding Region

28621432..28621776,28621939..28622056,28622390..28622442,28622545..28622672,28622791..28622920
,28623184..28623380,28623466..28623544,28623691..28623729,28623939..28624058
,28624154..28624255,28624391..28624474,28624569..28624811,28624893..28625018
,28625102..28625176,28625271..28625342,28625544..28625663,28625812..28625909
,28626380..28626539,28626619..28626717,28626859..28627056,28627141..28627234
,28627769..28627929

Expression

GEO Profiles:Os07g0662900

Genome Context

<gbrowseImage1> name=NC_008400:28620741..28628173 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28620741..28628173 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaatttgtccgggaagaaatctctgaatacagtgaccttggtcttcaaattaccctactacacacaatgggggcagagtcttctcatcgccggctcagagccagcacttggatcttggaatgttaagcaaggattgtctctcagtccagttcatcagggaaatgagctaatctggtccggcagagtttccgtcgctactggttttacctgccagtacaattactatgtagtggacgacaacaagaatgttttgagatcggagtccggggagaaaaggaaattagtacttccagagggtgttcaggatggagatgtagttgagatacgcgactggtggcaggatgcttctgaagctcttttccttcgaagtgcattcaagaatgtcattttcaatgggtctgaaaatgctaaaagagaattgaagactacatccctcaacaaaagtttggagcctgaagatattgttgttcagtttattgttagctgtccccgacttggagctggctctactgtcgtggtcacaggaagtaatcctcaattaggaaggtggcaaacacaagatggcctcaagcttaattatgtcggagattccatctggaaagcaaactgtctgttgcgaaagtctgagttcccaataaaatataaatactgtaaaattagtgaagcaggagtctcttcattggagttcggtccgaacagggaggctgatgtggatctatcatcacccaagccatccagatacgtcctcttgtctgatggtgcccttcgggaatcaccatggaggggtgcaggtgttgctgtacctatattctcgatcaggtcaaatgaggaccttggtgttggagaattccttgatcttaaacttcttgttgactgggcagtcaactcaggctttcatcttgttcagcttcttcctatcaatgatacttcagttcacgggatgtggtgggattcatacccatacagctcgctctctgtgtttgcattgcaccccttgtacctgagagtacaagcactttcagatgcaattccaggggatattaaggacgagatttcacaggcaaagaagcagttggacaaaaaggatgttgactatgaggcatcactggcctcaaaactctcgatagcaagaaaaatattcaaattagagaaagacaaagtactaaattccagttcgttcaagcagtttttatctgaaaacgaggagtggttgaaaccatatgctgcattttgttttctgcgggacttctttgagacatcagatcacagccaatggggccgtttttctcagttttccaaggagaagctagataagcttgtttctgaaggtaccttgcaccatgacgttatatgtttccattactacatccagtaccatctatatatgcaattatcagaggcagctgcctatgcaaggaagaaaaaggttattctgaaaggagatttacctattggtgttgataggaatagtgtggatacttgggtataccccactttatttcgcatgaatacagctactggtgcacctccagattatttcgacaaaaatggacaaaattggggttttcctacatataactgggaggaaatgtcaaaggataattatgggtggtggcgagctcgtctgacacagatggcaaaatacttcactgcatataggatagaccatatcttgggtttctttaggatatgggagcttccagatcatgcagccacaggtctagttgggaaatttaggccttcaattgctctcagtcaggaggagcttcttagtgaaggcctatgggatttcgatagaatgagccgcccttatattcttcaggaaacactggaggagaagtttgggtccttttggacagtaattgcagctaactttctaaatgagtacaagaaacaacattacgagttcaaagaggactgcaatacagagaaaaagataattgcaaagcttaagaacagttctgaaaaatcattatggctggagaaagaagacagcattcggcgtggtttgtttgatctactacagaatatagtccttattagagatccagaggacagcacaaaattttatccccgcttcaaccaggaggatacttcaagttttaacgatctagatgaacatagcaaaaatatcctcagaagattgtactatgactattattttgctcgccaagagaatctctggcgtcaaaatgcgctcaagactctgcctgtgcttttgaactcatcggatatgttggcatgtggggaagatcttggccttatccctgcctgtgttcaccctgttatgcaagaacttggattgattggattgcgtatccagagaatgcccagtgaaccaaacttggaatttggtattccatctcagtatagctacatgacggtttgtgctccgtcatgtcatgattgctccacattacgtgcttggtgggaagaagatggaggaagaagaagccgtttctaccagactgtaattggtagtgatgacgagccgccatctcgctgcaccccagaagtagcgaactttattgttaagcagcattttgatgctccatcaatgtgggcaatcttcccactacaggacctgcttgcacttaaagacaagtacaccacaagaccagcaaaagaggaaacaatcaatgacccaactaacccgaagcattattggagattccggctacatgtgacattggattcgctgttggacgataaggacatccaagcaaccatcaaggaacttgtcacaagtagtgggaggtcatttcctggtaaggtggatggcgccgaagaaagcggagagaagctagctaaagtccagttgaatggtaaaccatag</cdnaseq>

Protein Sequence

<aaseq>MTNLSGKKSLNTVTLVFKLPYYTQWGQSLLIAGSEPALGSWNVK QGLSLSPVHQGNELIWSGRVSVATGFTCQYNYYVVDDNKNVLRSESGEKRKLVLPEGV QDGDVVEIRDWWQDASEALFLRSAFKNVIFNGSENAKRELKTTSLNKSLEPEDIVVQF IVSCPRLGAGSTVVVTGSNPQLGRWQTQDGLKLNYVGDSIWKANCLLRKSEFPIKYKY CKISEAGVSSLEFGPNREADVDLSSPKPSRYVLLSDGALRESPWRGAGVAVPIFSIRS NEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPL YLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNS SSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHD VICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTAT GAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIW ELPDHAATGLVGKFRPSIALSQEELLSEGLWDFDRMSRPYILQETLEEKFGSFWTVIA ANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQNIVLI RDPEDSTKFYPRFNQEDTSSFNDLDEHSKNILRRLYYDYYFARQENLWRQNALKTLPV LLNSSDMLACGEDLGLIPACVHPVMQELGLIGLRIQRMPSEPNLEFGIPSQYSYMTVC APSCHDCSTLRAWWEEDGGRRSRFYQTVIGSDDEPPSRCTPEVANFIVKQHFDAPSMW AIFPLQDLLALKDKYTTRPAKEETINDPTNPKHYWRFRLHVTLDSLLDDKDIQATIKE LVTSSGRSFPGKVDGAEESGEKLAKVQLNGKP</aaseq>

Gene Sequence

<dnaseqindica>692..1036#1199..1316#1650..1702#1805..1932#2051..2180#2444..2640#2726..2804#2951..2989#3199..3318#3414..3515#3651..3734#3829..4071#4153..4278#4362..4436#4531..4602#4804..4923#5072..5169#5640..5799#5879..5977#6119..6316#6401..6494#7029..7189#ggaggaggagcaaaagctcccttttttatgccgtctctcgtcccagctgcaggtggcgctttcccaccctcgccactccgctcgctccccgtcgtagacgtcgccttcgccgtcgctctcctcgtccacccttttctgctccatgttttcatcatcatcttcttcttcttcttccacccgttgctgattccctcactgctgctcgtttctcgccattgcggccgttcttggctactgacagaagaggtaacccccgttcgttcgttcccttcttgatttgttcttgctttgctattggatgggatgcgctgagctgctggtagaatggttcttgcctggccatggcggcgaaaagtaggatgcgggagacacgggaatgtggggaggaacagtttcttgattctccgaatctgttctacccttttcgtggcaacatggaaagggtactgatacttgaatcataaccaatcttatttattggagaaatgggaaaagggaggggtggaaacaggaacatcgatggatatggatggcctcacatgcgtgcatcctgaaaccactcatttttgtgcatcgtctattgacttcatgagttcttggtagatggtgcttgtgaatctcgcatgattgttcattcattcatgtattcggtttactgacttgtctgcctgtttttgtatttttgataggaatgacgaatttgtccgggaagaaatctctgaatacagtgaccttggtcttcaaattaccctactacacacaatgggggcagagtcttctcatcgccggctcagagccagcacttggatcttggaatgttaagcaaggattgtctctcagtccagttcatcagggaaatgagctaatctggtccggcagagtttccgtcgctactggttttacctgccagtacaattactatgtagtggacgacaacaagaatgttttgagatcggagtccggggagaaaaggaaattagtacttccagagggtgttcaggatggagatgtagttgagatacgcgactggtggcaggtacttagtaaaagtttcatgtactaaattaatttctcttcatgcttgttgacctataaaaacattagtagcagtagcagcactacttgccatcatactagtcatacaggctttcatgttctgtaccatggcggtttatggatactcctgatttgaatttaggatgcttctgaagctcttttccttcgaagtgcattcaagaatgtcattttcaatgggtctgaaaatgctaaaagagaattgaagactacatccctcaacaaaagtttggagcctgaaggtaagaagagtctagaactgatggaataatcaacaggaagtcaagtggtcaatctacatatatcacatattccttttgaatatattttattcataaagaatcaatgtagcatcatgtcttacctatcgagcaaagcatgttgattgttgtttaattttttagataatgggcaacgtccggcctctgcattctaaggtgaatgcacacggccaagattgtcgtttaatatagtctcatatcttccatggtagtgcatattacttagatttacataccaagccaagcatggataacatttttttaattcattgtccctaaatttttcctcaacagatattgttgttcagtttattgttagctgtccccgacttggagctggctctactgtaagtgttattcgttcaatttatatttgattatctttatcccattatagctaataattatacttctggtactccctaactattgctcatgtcaaactttaggtcgtggtcacaggaagtaatcctcaattaggaaggtggcaaacacaagatggcctcaagcttaattatgtcggagattccatctggaaagcaaactgtctgttgcgaaagtctgagttcccaataaaatatccttgtgccaatgagtactcacttacttccaatttgcatgtagaaatcaccatttagatattatttctgaagaaatcaccattcagctattgaccattcttaacaatatcccacatataaatactgtaaaattagtgaagcaggagtctcttcattggagttcggtccgaacagggaggctgatgtggatctatcatcacccaagccatccagatacgtcctcttgtctgatggtgcccttcgggtaatgtatgcagccataattagtacgctgaaaatatgcttataattgcatgttgttttggctcccattacctttgctatgatgcattaatcaatccgtcatattcagtttgctcaatccatgatctaaaaagtaataccatcaaatgcttggtagaaagaacaactgtatctcatgatttagcaagatctgaggatacagtgcgcgcccacttatcatagagaactgatgagtagcactaattcagcacttggttttaccaggaatcaccatggaggggtgcaggtgttgctgtacctatattctcgatcaggtcaaatgaggaccttggtgttggagaattccttgatcttaaacttcttgttgactgggcagtcaactcaggctttcatcttgttcagcttcttcctatcaatgatacttcagttcacgggatgtggtgggattcatacccatacaggtattgggctgatgcagtgtgcttttgctttgagtaagaagaatagtatctgaacagaaataatgccctacatgttggtttacagctcgctctctgtgtttgcattgcaccccttgtacctgagagtacaagcactttcagatgcaattccaggggatattaaggtgtacctttgttataccttcatatgaactcattgtacccgttatctatgttaacttttaatttcaatatttcactgattttggtaggtcttgtatgatttcaagttcattcctgatccagtactcaatatttcttattattacaggacgagatttcacaggcaaagaagcagttggacaaaaaggtacagatattatcaaatgcatagcatatcactaatttaccttttgtcactggtatgttgctgacctgctgttggatggatgcaactcatgtcctctatataatttagctacgcttaaatctaaaatcagatggttatgtaattaatataattcttctgttgcttgcagaaacctaacattctgttatttgaaaatcatgtttaaacaggatgttgactatgaggcatcactggcctcaaaactctcgatagcaagaaaaatattcaaattagagaaagacaaagtactaaattccagttcgttcaagcagtttttatctgaaaacgaggtatatttagttatttgctagcattttatttagttgaagtacttgataacttatttcagacttactgtgattgcgttccttccatgttccaataggagtggttgaaaccatatgctgcattttgttttctgcgggacttctttgagacatcagatcacagccaatggggccgtttttctcagttttccaaggagaaggtgcgatcagtataacatgctaaacattcttttaagaaaatcctatcattcggttttattctttctgagaggcgagaccatatatgggaaaatgttcaagtactaagtgatggctgtttctgtaatttctttcagctagataagcttgtttctgaaggtaccttgcaccatgacgttatatgtttccattactacatccagtaccatctatatatgcaagtaagtattggtggttgtccttgtcactctgatctgcatacagagtttttcttgcatatgtactcactgacatttattatctccttcatgttagttatcagaggcagctgcctatgcaaggaagaaaaaggttattctgaaaggagatttacctattggtgttgataggaatagtgtggatacttgggtataccccactttatttcgcatgaatacagctactggtgcacctccagattatttcgacaaaaatggacaaaattggggttttcctacatataactgggaggaaatgtcaaaggataattatgggtggtggcgagctcgtctgacacaggttatttaatagcaaatattttttcctgtctggctggtcatcttttatcgtcattatttatcgccagttaccttgttccagatggcaaaatacttcactgcatataggatagaccatatcttgggtttctttaggatatgggagcttccagatcatgcagccacaggtctagttgggaaatttaggccttcaattgctctcagtcaggttggtttctgcagctgttaaacaaactaaaagagactagagagcctgaagtttatctgactttttcctatgttgattttcaggaggagcttcttagtgaaggcctatgggatttcgatagaatgagccgcccttatattcttcaggaaacactggaggtttgtctttcttgttcctaaaacaatgatctatcttttttttttaacaggaaggaaaacagggcaccagcatgacatttctattctgttataggagaagtttgggtccttttggacagtaattgcagctaactttctaaatgagtacaagaaacaacattacgaggtaatgcaatcagttatattctcttttcatgtttgttgaacgtatcacctacttaaaaccgcatggcatgagtagatttagcttaggctttagtacagaagtctccatttcaaaatcagctacgtgcactccttactgcatttttccattacatttcgtcctctaatttcccttgcaatttattgttttgcacgtgtatagttcaaagaggactgcaatacagagaaaaagataattgcaaagcttaagaacagttctgaaaaatcattatggctggagaaagaagacagcattcggcgtggtttgtttgatctactacaggtaattcatatcgagtgcatataatccatgctacaactttctcttaacctatcctgatccttttcaatccacataaaaatattatttgaaattctcaacaaaatatcattgaaatcattagaaataaaacatactgtttattctgcagaatatagtccttattagagatccagaggacagcacaaaattttatccccgcttcaaccaggaggatacttcaagttttaacgatctagatgaacataggtaatattgattttatttaactccaattgtttccttctctatgttcaggtcggacaagaccttgatctgcacttttgcgttttactctgtaaatttacttcaagctagttaatgctgatgaagtatttactttttagtccaacaggttaacagtgcaggatccttgtgatattgaactttgttacatactgctcctttctgtccaaaatttgcttagttctactgctatcgccttactacatactctaataatcgatatttttcactatgcatctctagtaggcatcaagaaaaatgaaactagtatattcagcagcagtttcttcccaagaaaattatgaagtacagtagcacccaacgttttaggtcttgctaatagcactcccttatttatgcaatgagcactaactaaattgttccttgtggagtacgaactatttcatcctctcatgaaaaacattgttttacagcaaaaatatcctcagaagattgtactatgactattattttgctcgccaagagaatctctggcgtcaaaatgcgctcaagactctgcctgtgcttttgaactcatcggatatgttggcatgtggggaagatcttggccttatccctgcctgtgttcaccctgtatgatgttttcctgcacatgctagtaaacagctattgcttgttctatgcacataaatgacagaaatatattatccaggttatgcaagaacttggattgattggattgcgtatccagagaatgcccagtgaaccaaacttggaatttggtattccatctcagtatagctacatgacggtgcgtttcccttctgtttacttgggttcaatatgttcattgctacagatgcacacatacttaggttgtatatggcaaactaaaaatggtttggagaagctattcagtttgatgttcaattttgtgtcatatttttttcaggtttgtgctccgtcatgtcatgattgctccacattacgtgcttggtgggaagaagatggaggaagaagaagccgtttctaccagactgtaattggtagtgatgacgagccgccatctcgctgcaccccagaagtagcgaactttattgttaagcagcattttgatgctccatcaatgtgggcaatcttcccactacaggtatataggttggcttgttaacttatataaaagatcaatacagaataaagtagattaatgtacttggggtgttctatttgtcaggacctgcttgcacttaaagacaagtacaccacaagaccagcaaaagaggaaacaatcaatgacccaactaacccgaagcattattggagattccgtaagtcaattttccaatattattattttccttgcttcatcaaaattaggtattaagagtaaacaaattcaaaaagagaattggctattcttgacataataataccttcatacgagaaaattcccatacaattaattggcataaagcaatatgttcaccatgaaaaagatatgaggcgatcagatgatgtcacattgttgtctggtttgatcagtgacgctgttagatcaatcagatgatgtcaacagctgaaacatgcacaattcagcatgtgtccttattctattgtcaacatgactttttttcttgctgatggtctacatgagcaaatgaaatgctatcttcccaactacagatgaacaaaaagaatatctcggcgagcgaacttgtaggatactatcattttcatatgctaaagtgacgtctctcaagtcccatataaaatttgcgcattccctgttgtaaatttggcaacccataattgaaggtgtttgtttttccttgcatctaacttctcccctctatttctttaagggctacatgtgacattggattcgctgttggacgataaggacatccaagcaaccatcaaggaacttgtcacaagtagtgggaggtcatttcctggtaaggtggatggcgccgaagaaagcggagagaagctagctaaagtccagttgaatggtaaaccatagaaaattatcccaagaacagccgaagggtatcacggtcaaaagtaaatagaataaggcagcgtactgccaattggcatgccagttcagctggtgttgtttcagctagaattttttttacgccaacttaattccatttaacactggaaataattagtatcattcatcaagtcggcatgtggaataatttatcccctgttctttgctaataaaatctttttctgatgaatcatctgtttgctagtac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0662900, RefSeq:Os07g0662900