Os07g0663300

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Revision as of 08:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0663300| Description = Similar to RNA-binding protein BRUNOL5 (Fragment)| Version = NM_001067084.1 GI:115473900 GeneID:4344194| Length = 47...")
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Gene Name

Os07g0663300

Description

Similar to RNA-binding protein BRUNOL5 (Fragment)

Version

NM_001067084.1 GI:115473900 GeneID:4344194

Length

4709 bp

Definition

Oryza sativa Japonica Group Os07g0663300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28643406..28648114

Sequence Coding Region

28643684..28643793,28643880..28644023,28644114..28644441,28645836..28646021,28646176..28646264
,28646358..28646489,28646646..28646697,28647544..28647626,28647712..28647871

Expression

GEO Profiles:Os07g0663300

Genome Context

<gbrowseImage1> name=NC_008400:28643406..28648114 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28643406..28648114 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggagatggggaggatggcggcgagagggtgcggctgttcgtcggccaggtgccacgcagcatggcggaggaggacatcctcgccgtggtccgcgccgccgcacgcgccgacgacgccaccgtcatccgcgaccgcgccaccggcgcctcccgcggttgctgcttcgtggtgtgctcgtcgagggaggaggcagacaaggccatcgccgcgtaccacaacaagtgcaccctcccaggagcgtccagggcaatgcaggtaaaatacgcggacggcgagctggaacgattagccgcagagcagaagcttttcattggcatgcttccaagggatgtgaaggagaatgaagtttctgcattgttttcgcagtacggaaatattagacaactgaaggtactgagaagtccacagaaaacaagaaaagctgcagcctgtgctatcctggaatttggaagcaaagaacatgctagagcggccattgaagctttgaatggcacacgtgttgtgttcaatggttcaagtgcgactttggttgttaagttggctgacactgaaagggaaaagcaagctagaaaggcacagaaagctcaggctcaaccttctaagcccttaagattttatctcttcccccagctgctatcaatatctggagcaccacagatgagctttcttcctccatataatgtattggattacaaggtaccagggcattatggacacacgaagaacccattggcattgtacagcactatgtacccacatgtcaatcaaggaaatttactccagggactcaacacaaatatatttccaggaacagatcctaaaatttcgaacctgattcaatctgctggatacatacaacctccttaccctgatttgtcaggtcttcattacccagtatcatatgcaggtgccttagtgggagatacaccacagtatttctctgatggtaaggtaaacataccaaacagtcatagcaatcatgcctcatctgcagcaaacacaaagatagggagtaagattgaaggacctcctagggctaatttatttgtctatgacatccctcaagaatacggtgatgaagatctggcaaatctatttcaagaatttggtaggatcttgagtaccaaggttttcattgacagagctactggtgtcagtaaatgtttcggctttgttagttatgacacaccagcatcagctcaggctgctatcaggaggatgaatggctcacagataggtggcaaaatgctcaaggtacagctcaagagggaaacatga</cdnaseq>

Protein Sequence

<aaseq>MAGDGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVI RDRATGASRGCCFVVCSSREEADKAIAAYHNKCTLPGASRAMQVKYADGELERLAAEQ KLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAACAILEFGSKEHARAA IEALNGTRVVFNGSSATLVVKLADTEREKQARKAQKAQAQPSKPLRFYLFPQLLSISG APQMSFLPPYNVLDYKVPGHYGHTKNPLALYSTMYPHVNQGNLLQGLNTNIFPGTDPK ISNLIQSAGYIQPPYPDLSGLHYPVSYAGALVGDTPQYFSDGKVNIPNSHSNHASSAA NTKIGSKIEGPPRANLFVYDIPQEYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFG FVSYDTPASAQAAIRRMNGSQIGGKMLKVQLKRET</aaseq>

Gene Sequence

<dnaseqindica>4322..4431#4092..4235#3674..4001#2094..2279#1851..1939#1626..1757#1418..1469#489..571#244..403#agatgatgattcgatcacatttactcctactcgagatcaagatcttggtggtactactcatcgattaattaacttgtactcatcgagaccctgatactgatcaatcaatcaaacaatcagtcagtggttagtgctcgtcgtcagagatagcaaaaaggcgcaggcaagaacgaggagaggacggacaggcgccatcagaaaaggaaagaaacgtgagagagagagacacagatcgcggcggcgatggccggagatggggaggatggcggcgagagggtgcggctgttcgtcggccaggtgccacgcagcatggcggaggaggacatcctcgccgtggtccgcgccgccgcacgcgccgacgacgccaccgtcatccgcgaccgcgccaccggcgcctcccgcggtgagccattgatttgctcttgcccgtgtgtgagaagcagaagaagaagatgatgaaaatttggaatttatttgggttcttgcaggttgctgcttcgtggtgtgctcgtcgagggaggaggcagacaaggccatcgccgcgtaccacaacaagtgcaccctcccaggagtaagttcttcacttgcattcacctgcaagattggatacaatttggggtgggggcaacaaaaatcatgatttctgttcatgattgattgattgatttggtgaattcttgtctggaatcggggatggaaaaggagattgtaaaggatttttattttccctttttgtgactaaagatgtgcctcgtgcatgattggtgtggaatcagatatagggattgttcattttcattgagactatatttatcaaaaagaaatttcaatgagataatatgtgtcaaatttcaatgagattgttctcataagagaaatgttgttcctgtctccttaatcaggcatccagggcaatgcaagtatctttctatccatgattgatttggtgatttttttttctgaagatggggatggagacaggaacagttcatggagattggaaaaggatgttctttttggttcctagtgatttgtgtagaatcagacaggaaaaagctcgttttcactgagattatttatcaaaaaggaaatccaatgacaagatatgggctctatgattgtcaattctgtagttctgataagacaacctcccctacgcaattttacgcaggctaattgaattggatttgatgtagtataacttctagatcctagtttcatatatgcaatagataccaaaattatgattcttttagataatggaataaatacctcggtctctatatcatggcgatgcaaagtaggactggattaaatatactaacacttttctacattcgatgagatgatatgtgctctatgattgtcaattctgtagttctgataacacaaattctgttcctgtcgcctcaatcaggcgtccagggcaatgcaggtaaaatacgcggacggcgagctggaacgattaggtataatttcccaatacaatgtatttggtactgatgattcctaatcaaagaagaattggtcctaattcctaaataacttgggacattgttcttcttgtgacactcttgcaaccctgctgatgttgtactctgaaacggttgctgcctgactcgcagccgcagagcagaagcttttcattggcatgcttccaagggatgtgaaggagaatgaagtttctgcattgttttcgcagtacggaaatattagacaactgaaggtactgagaagtccacagaaaacaagaaaaggtagtagaacttacagatcgtctcgtttttgttatctgaaatactatgaatggttttagtgctcacatccttgatttgttataaacaaaaaagctgcagcctgtgctatcctggaatttggaagcaaagaacatgctagagcggccattgaagctttgaatggcacacgtgttgtgttcaatgtaagccttctcctatctgaatcttctgtgtagagctctccagcctgcaacattggttttgttcctgcaaacaacatagcaaattgatctttactgaagaaacaaggaatgcaactttactgaattttctaacaacttcacgacatccacttagggttcaagtgcgactttggttgttaagttggctgacactgaaagggaaaagcaagctagaaaggcacagaaagctcaggctcaaccttctaagcccttaagattttatctcttcccccagctgctatcaatatctggagcaccacagatgagctttcttcctccatataatgtattggattacaaggtgatctttcatctgaattattttatcaattgcaactgctcaaacgaatacagaaccaccaaaattctgacatagaaatgatgggaactggagatataggaatgcttgggctccctcaatttcaaaatatagggtgtattttgttttcgttaggacaaggctttgactaacatactctattataatataacaaaataaaatacaccctatattttgaaatgtagggagtacatttctggtactgaaatccctgcattatagataactcatagaattaagacatgaggagctagcttcaaacatatttcctttgttctcaacttctcatttattattatctgaactatgctagctatcgaatcacattttttttttatagataaactaagccagggcttggatagtatcccattagagtatgatagtatatgagcagacaaaagattcacctcatggtgcaaaagtgtgcctttagaaaatcgtcagattaatattgagctggatgcatatgaagatctctagctacatttcatttatctagtgttcaagtcaatactagaaattcaacaaactagagctatatgttccttttaaaaaaaatatgtactctacaaaacaagctttacccctccccgctatttctgtagcaatcatcctctttctaatactatcaattatacatggtcactatcagactgaaggaacaacggatccagaattgaaagatctaatgaagatgacaaacgacaaacttgagatgctagtgactgagctcaagagcgtggtgaacttattagagaatcgagttacatataatgatccaatacagccaattcagcattctctcttacctgtagagcatgacgagaagcaatataagcctaatgagtgtgattccaaaacgttagaggtaacaccttgaacactggcccatcttttctgttgttcccgatctttccttctttagtgaaggactgcctcaaatgtttatttccaaaggacaggattgcttgaaattcctgctagtagaactttgactatagtagtgttaaatgagctcttataggttatagcctattttaagagttatttactcgatgatattcttcatgttgtatgctacttcacttgtgattctgctatcagaatcacaaatcctgatgcatggatataagcaccaatcctacttattactcattgcaatataaattcttttgatcaaacatataataatgttgtaaattgctatggaaaacattttaacgtctgtctatttcttccaccctagcccttggcacatcttttacactgggccattcttcttctttttacttgtttaatgtataattatattgtgtccagatgaattgaggtttgtacacaaatttttgcaggtaccagggcattatggacacacgaagaacccattggcattgtacagcactatgtacccacatgtcaatcaaggaaatttactccagggactcaacacaaatatatttccaggaacagatcctaaaatttcgaacctgattcaatctgctggatacatacaacctccttaccctgatttgtcaggtcttcattacccagtatcatatgcaggtgccttagtgggagatacaccacagtatttctctgatggtaaggtaaacataccaaacagtcatagcaatcatgcctcatctgcagcaaacacaaagatagggagtaagattgaaggttagtaaaacttaagcttactgtgtcatataagatgcattttccatggttcgttagctgattggtcattttacttatgccaaccctcaggacctcctagggctaatttatttgtctatgacatccctcaagaatacggtgatgaagatctggcaaatctatttcaagaatttggtaggatcttgagtaccaaggttttcattgacagagctactggtgtcagtaaatgtttcggtaaaccgcactgcaactctgtattttgcatagtcactgcaatgagagtctgtgtggtattcatgttctgtgcttcttctgtgcaggctttgttagttatgacacaccagcatcagctcaggctgctatcaggaggatgaatggctcacagataggtggcaaaatgctcaaggtacagctcaagagggaaacatgatgtgacaactgacaacccagttgacatgtagtgaaattatgatgtctggacattgtagtgctgagagtaccatcctgcatagtgaacaaggcagtgcagctggatatggaaaaccatagatgtagctatgacaaggttgttcattgttactcttgaagatcgccagaatttctaggcacagttctcttgttgcattacacacaactaatgcatatgaacaagccatgtaattggatctggcatttggtcaagcataaggtagttccgacattcgatta</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0663300, RefSeq:Os07g0663300