BGIOSGA020255

From RiceWiki
Revision as of 16:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020255

Description

cDNA clone:J033035L13, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA020255, complete gene.

LocusTag

OsJ_19333

Ensembl Transcript ID

BGIOSGA020255-TA

Ensembl Protein ID

BGIOSGA020255-PA

Length

1479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27910579..27912057

Sequence Coding Region

27910579..27910657,27910849..27910931,27911058..27911117,27911238..27911346,27911432..27911484
,27911611..27911691,27911796..27911908,27912003..27912057

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27910579..27912057 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27910579..27912057 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATGCGCGTCGTCGAAGCAGTTCAAGCGGCCGCCGGGGTACGAGGAGCCGGCCGTCCTCGCCGCCCAAACCACCTTTACGGTGAACGAGGTGGAGGCGCTGCGCGAGCTGTACAACAAGATGAGCTATTCCATCATCAAGGACGGCCTCATCCACAAGGAGGAGTTTCAGCTTGCCTTGTTCAGGAACAGCAGAAAGGCGAATCTCTTCGCAGACAGGGTGTTTGATTTGTTTGATCTGAAGAGAAATGGGGTAATCGAATTCGGGGAGTTTGTACGGTCGCTCAGTGTGTTCCACCCAAAAGCGCCTAAATCAGAGAAGACTGCGTTTGCATTCAAGCTCTATGATCTAAGAGGGACAGGATATATTGAGAAAGAAGAGCTCAGGGAGATGGTCTTGGCACTTCTAGATGAATCAGACCTACATCTTTCCGAATGCGCTGTCGAGGCAATTGTCGATAATACATTCAGTCAAGCAGACTCAAATGGAGATGGCAGGATAGACCCTGAGGAATGGGAAGAATTTGTTAAGGCGAACCCGGCATCACTAAGGAACATGTCACTTCCCTATTTGCAGGACATTACCATGGCGTTCCCGAGCTTTGTAATGCATTCAGAAGCCCATGACTGA</cdnaseq>

Protein Sequence

<aaseq>MGCASSKQFKRPPGYEEPAVLAAQTTFTVNEVEALRELYNKMSYSIIKDGLIHKEEFQLALFRNSRKANLFADRVFDLFDLKRNGVIEFGEFVRSLSVFHPKAPKSEKTAFAFKLYDLRGTGYIEKEELREMVLALLDESDLHLSECAVEAIVDNTFSQADSNGDGRIDPEEWEEFVKANPASLRNMSLPYLQDITMAFPSFVMHSEAHD</aaseq>

Gene Sequence

<dnaseqindica>1..79#271..353#480..539#660..768#854..906#1033..1113#1218..1330#1425..1479#ATGGGATGCGCGTCGTCGAAGCAGTTCAAGCGGCCGCCGGGGTACGAGGAGCCGGCCGTCCTCGCCGCCCAAACCACCTGTGAGCACCTCTTCACCTATGCGTTTTTTTTTCAAGATAATGGAAGCTTTATTGCACTCGTTAAATACTTTAATTACATCACCGATGCATATGCAACACCATTGATAGTTAAGCAGTTATTGTTACAAGTTACAACGGCTGTGTGTTTGTTTTGCCTCTGCATTGTGGATGATTTTGCAATGTTCTTGCAGTTACGGTGAACGAGGTGGAGGCGCTGCGCGAGCTGTACAACAAGATGAGCTATTCCATCATCAAGGACGGCCTCATCCACAAGGTGATTTAAGCAGAGTTGATTAGATAGCTGCCTCCAATGGCGTTTCTGGGATGCCAATCTTCTTGATGATGTACTACCATTGTTCCTTCTGAATGCGCTGATCATGGTGTGTTTTTTGTTGAGCAGGAGGAGTTTCAGCTTGCCTTGTTCAGGAACAGCAGAAAGGCGAATCTCTTCGCAGACAGGGTTTGTTCTTGTTCAGTCCTGATTCTGTCAGCAGGCAGGAGATGGCCAACCAAATGGTCATCTTGTTTGATTCTTCTCTGAACAAAGAATGATCATTCTGTTGCATGTTTTTCATGGCAGGTGTTTGATTTGTTTGATCTGAAGAGAAATGGGGTAATCGAATTCGGGGAGTTTGTACGGTCGCTCAGTGTGTTCCACCCAAAAGCGCCTAAATCAGAGAAGACTGCGTGTATGGCCCTGCCTCCTGTGCATTCATCTTCTTATTATTTTCAGAAATAGGCGTATTCAGTTTATCTTTCTCCTCATCTTGGCAGTTGCATTCAAGCTCTATGATCTAAGAGGGACAGGATATATTGAGAAAGAAGAGGTGAATCTGAATCACTCTCTTTCACGGCAATTTGTACTTTTCATTATTAACCCTGAACTTCAATTAACAGGTTGATTTTGTTTCCCTTTCAAGAAATTAACAGATTGTGTTTGCTTACTGAAACAGCTCAGGGAGATGGTCTTGGCACTTCTAGATGAATCAGACCTACATCTTTCCGAATGCGCTGTCGAGGCAATTGTCGATAATGTACTGTAGTTAACAAAGATCCTTCTAAGCATTTACTCTCTCAAATATAATTTTCAGATGATTTTTCTGACTCGATCCTCATGCTGCTCCTTTTTGTCTTGCAGACATTCAGTCAAGCAGACTCAAATGGAGATGGCAGGATAGACCCTGAGGAATGGGAAGAATTTGTTAAGGCGAACCCGGCATCACTAAGGAACATGTCACTTCCCTATTTGCAGTGAGTAGTGAAAATACTGAATTCTCACTAGAAACATTAGAACTAGAAGTGTACTTTTTCCCAATCTCAATTTTGTGTTATTGATTATTTTCAGGGACATTACCATGGCGTTCCCGAGCTTTGTAATGCATTCAGAAGCCCATGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020255