Os07g0667000

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Revision as of 08:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0667000| Description = Similar to Tubby-like protein 3| Version = NM_001067107.1 GI:115473946 GeneID:4344218| Length = 3602 bp| Definition...")
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Gene Name

Os07g0667000

Description

Similar to Tubby-like protein 3

Version

NM_001067107.1 GI:115473946 GeneID:4344218

Length

3602 bp

Definition

Oryza sativa Japonica Group Os07g0667000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28833377..28836978

Sequence Coding Region

28833623..28833976,28835114..28835201,28835294..28835423,28835520..28835699,28836028..28836496

Expression

GEO Profiles:Os07g0667000

Genome Context

<gbrowseImage1> name=NC_008400:28833377..28836978 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28833377..28836978 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctttcaggagcgtgatccaggaggtgaagggcgagatcggcgccatctcgcggcgggggttcaggtcgcggccggggcgagtccggcgagtggcggcggcggcggaggagccgccggacgagtcgtcggcggcggcgctggtgatgcgggagagctgctggacgcagctgccgccggagctcctgcgggaggtgctggcgagggtggaggagtcggaggggtggtggccgcgccgccgcgacgtggtggcgtgcgccggcgtctgccggagctggagggggatcgtcagggagatcgtgcgcaccccggaggcgtccgggaacctcaccttcccaatctctctcaagcagcctggcccgagggatgctcctatgaaatgtttcattgtaaggaaccggaccactcagacatattacctgtacattggactgactgatgcattaactgatgatgggaagttcctacttgctgcacgcaaatgtcgtaggaccacatgcactgagtacctgatttcgcttgatatgaacgatatatcaaagaggactgatagttatgttggcaaactaagatctaacttcttgggaaccaaatttactatctatgatgcccatccaccttatgctggagatgtgatttcaaagggtcagtctgcacgtgtgattggttcaaaccatttatcccccaggatacctgctgggaattatccagtctcacatatttcatatgaattgaacgttttgggttctaggggcccgagaaggatgcactgcgctatggattctatccctgtatcagcaattgaacaaggaggaacagctccgacgcagactgaatttcctttgagttaccatgaatctttcacatcaattccctttttcaaatcaaaatcagttcgagcgaataattcaactgcttcattactcactcaaaatggaagcaaactggtgttgaagaacaagtccccgaggtggcacgaacatctgcagtgctggtgccttaacttccatggacgggtaacggttgcatcggtaaagaacttccagctggtggcttcagatgagagtaacccaaccaaccaggaacacgatgatgtgatcctccagtttggtaaagttgggaaggacatgttcaccatggattaccgctatcctatctcggcatttcaggcgtttgcgatatgtctgagcagctttgacaccaaaatagcgtgcgaatga</cdnaseq>

Protein Sequence

<aaseq>MSFRSVIQEVKGEIGAISRRGFRSRPGRVRRVAAAAEEPPDESS AAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVR TPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAAR KCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQS ARVIGSNHLSPRIPAGNYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPT QTEFPLSYHESFTSIPFFKSKSVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCL NFHGRVTVASVKNFQLVASDESNPTNQEHDDVILQFGKVGKDMFTMDYRYPISAFQAF AICLSSFDTKIACE</aaseq>

Gene Sequence

<dnaseqindica>247..600#1738..1825#1918..2047#2144..2323#2652..3120#gacgacgaaaaggccacagctttcaatataaacaaacaccaaacgaatcccttcttagcggtagtgcatccccatccatccattctcgcacaagattccatcttttcatccaccaatctcgcgaaatctccgtctaattcaagaaaagatgagctgaggaatgagaggaaatattggtgttgcgaattgtggattgggaatttggagtttggattaggaggaggaggaggaggagaagattaggcgatgtctttcaggagcgtgatccaggaggtgaagggcgagatcggcgccatctcgcggcgggggttcaggtcgcggccggggcgagtccggcgagtggcggcggcggcggaggagccgccggacgagtcgtcggcggcggcgctggtgatgcgggagagctgctggacgcagctgccgccggagctcctgcgggaggtgctggcgagggtggaggagtcggaggggtggtggccgcgccgccgcgacgtggtggcgtgcgccggcgtctgccggagctggagggggatcgtcagggagatcgtgcgcaccccggaggcgtccgggaacctcaccttcccaatctctctcaagcaggtttgcacccctttttttcccctctttttgtttaccactctgaatctgaattgctgatgctgttcattttgtgagatttccatgacaacataccaaagtgttcttgatttgtcactagggccttgttttttttcttcaaacttcaaactttttcatcgcatcgaaactttcctacacatataaacttctaaattttccatcacatcattccaatttcaaccaaacttccaattttgacgtgaactaaacacactcatttttatcctcgttgtagtcattttgctatccatctattttttttaagataatagaagctttattgaactcaacttttgagaacacagccaaaacaccccacgcacaccgctaaagaaagagcggtaaaaatatctgaagactaaaacgtcacccatgcgtcaggtaaaaaacttcttatcctcctactctaattgaagacagacaagctgcaacagtaaaatcgttctaaatgggcctttgaagaataagccaagcacgaagccatcgtgtaatcaatctatggtttcatgcattcgtttggatgggaatggatggcgatgtgatggcgattgcattaattattttctgtaatggtattgagttttctgttgtgtgttaggaagacatcaagggaagtaacgtataaataattatattgctgggtaaccacttaaaaagtcatactttacctttcaatttcggagtactataaagtaaaaactagaggaaaagtgataggtcagatcagtaaacaatcctcgatgactcgttctgtgggtcaatgtgggatttatgtagcacgaaactccattgtcaaatgcaattatatctttttatagaccggaggccagatggcccagcttgtgttgaaagctgataaaatgcaattatattcggtaggtcaatgatgggaaggtgtttattaagcgtggaagttacaacatcagaacacaagttggttttcattaaaaacagttcgctatgtggattgataaacactgttcttgcataatgtctgtttgctttttgattcatgaacaaatgacgtttgtttacttatttatggactgcaaagctttgtcggtacatccttttcacttagacaacatttttatgcagcctggcccgagggatgctcctatgaaatgtttcattgtaaggaaccggaccactcagacatattacctgtacattggactgactgatggtatgtttttccttttttacattgggtgtaattatgtaatctggaattctagatgtgctagttgttgattgaagcagctccttattttgcagcattaactgatgatgggaagttcctacttgctgcacgcaaatgtcgtaggaccacatgcactgagtacctgatttcgcttgatatgaacgatatatcaaagaggactgatagttatgttggcaaactaaggtgatcccttgacattaatgtctgaaagatacttcagtactgagcatgatctcaaaatggacaggccaatctctaacgttttcttccattaaacagatctaacttcttgggaaccaaatttactatctatgatgcccatccaccttatgctggagatgtgatttcaaagggtcagtctgcacgtgtgattggttcaaaccatttatcccccaggatacctgctgggaattatccagtctcacatatttcatatgaattgaacgttttgggttctaggtatgctactcacttctattctgctgacttttgttagtgtgtttatcttttgttttgtgaatgctatgactgataagcacctaccgtttgaaatgattgtaacaatcttattgtaaagctactagcttgcactaattttactaaagaaggaaatatacgagtagtgcacaatcttataaatttagatatacactttgaggccatatcgtgatagttggtaaccaaagctatggttttatagacaatgctgcaaaaaacagatttagttactgagcttctgcctttctatttatttaaggagtgtcactgatcatcttttttgttataggggcccgagaaggatgcactgcgctatggattctatccctgtatcagcaattgaacaaggaggaacagctccgacgcagactgaatttcctttgagttaccatgaatctttcacatcaattccctttttcaaatcaaaatcagttcgagcgaataattcaactgcttcattactcactcaaaatggaagcaaactggtgttgaagaacaagtccccgaggtggcacgaacatctgcagtgctggtgccttaacttccatggacgggtaacggttgcatcggtaaagaacttccagctggtggcttcagatgagagtaacccaaccaaccaggaacacgatgatgtgatcctccagtttggtaaagttgggaaggacatgttcaccatggattaccgctatcctatctcggcatttcaggcgtttgcgatatgtctgagcagctttgacaccaaaatagcgtgcgaatgagtgaaggtgtgattctttcttccatgatcgaatgaaccgtttcctgatgacccacattgcaagctggccatgcactctgcttagttgcttccaccttttggaagcatgcagaatagagacataaataaaagttgctttaaatctaacattttagttgggtagggatatgtaacctgcaatttagctttcttgaagtatgttcaacctgcaacatttgagtgacttgtaagtcttgagtttaactacaggtgttggataaccacaattgacagctcaggattatgtgtatacttgtccctttggaaatccatagatgtatctgtttgcatagatatgcttatgttacattcttctattaccagaatgaagcagagctattggatcttgtttcaaaaaaaaacatgaaatgtacatgagacccttttttttcacatcgaataatgttctggctcaattgttcatggaaaaaaatgttaccatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0667000, RefSeq:Os07g0667000