BGIOSGA020520

From RiceWiki
Revision as of 16:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020520

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020520, complete gene.

LocusTag

P0541C02.38-1

Ensembl Transcript ID

BGIOSGA020520-TA

Ensembl Protein ID

BGIOSGA020520-PA

Length

2052

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32415917..32417968

Sequence Coding Region

32416549..32417968,32415917..32415963

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32415917..32417968 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32415917..32417968 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGACTGGCGGCGCCGCCGGGGAGAAGACGGCCAGCAGCCTCCTGCTCGGCGTCCGGGGCTACACGTCCACCCTCAAGAACGCCTCCACCGCCAGCTGCAGGTTGAGCGCCGGCCATCCCATCGAGGTGACTTTGTGGGAGGCGTCCCCGCCTGCCCTCTCCCACTTCTCCGTCCACTGCCCCGATCTCCCATCCTTCAATGGCAATCTGCTTGGCGCGCCTCAAGCCATCGCCGCCGCCGTCGACGACGCCGACGGCCAGCTCCTCCTCCTCCTCCGAGTCCCCATCGATCAGCTTGGTGCCCCGCATGACAACGACTACTTGGTCTACCATCCGGATCCCCCGTCTCCGAAACTGGATCTGCTCCCCAACCCGCCTCCCCCTACCCTCGGTGACCACCAGCTCGCCATACTCAGCTGCGGCGACGACCGCTACGTCGTGGCCGCCCTCCACGTCTGGAGTGAGTTCACTTCCACGCTGCGCCTGTACAGATCTTCTTGTTCGTCTGGGAGTTGGACATCGGAGGAGGTGTCCGTGGAGGAGCCGGTGAGGGACAGGCTGTGCCCGATCCCGGACTCAGCCAAGAGGCAGCTGTACCACGTCACCACCAAGACCATCACGCTCGGAGGTGCGAAGGGCACCGTGGGCTGGGTTGATCTCTGGCGCGGCATCCTCCTCTGCGACGTGCTCGACGAAATGTCTCCAAGGAAGCTCCGCGACATGCCGCTGCCGTGGCCGGCCAAGGGCAATTGGAGGATGTACCTCAATGGAGATGTGTCCTTTTGTCGGGACATCGCCATCAGCCAACACAAGGATTCCATCAAGTATCTGGAGATGGAGATCGTTTCACCAAGAACGGTGACCACCACCATACCCACCTCCACCTCTGCAGATCCTACTTCATACCTTGAATGGGTTCGCCGCAGCAGAGAACCTCAGCCGACACGGCGACGCTCCGTGTTCCACCCTGGTTCGTGGAGAATCACTACATGGAGCATGCCTATCCCGGTCACTTCATGGGACGACTGGCGCCGTGACTGCACTGCTGAATCGCGTGAAGTCCATCTTGACACCAACCCAAGTCACCATTACGAGTTGCTTCATAGCCTCATGCTCAGCAACAGCGGTGATGAACACAGGGAGGAGGCTCAAGGTCAAGGGGCAACCTCTTCCTTGTCCCTAGGTCGCCTGCGTTTGTGTTACCCGGCCTTGAGTTGCATCGATGATGATGTTGTTTACCTCTTGGGCAACGCTGCTGGCAGGGGTGCTAAGACGGGAGGAATGATGGTCGCTGTTGACGTCAGGAACAAGGAGCTGCGAGGAGTGGCCAAGCTTGACCCCGAAAAGAACACCCTCTACTCCATGCGATGCTACCTTGCAACTGGGATCTCCAAACGCCTCAACACTACCACAGACACAAGAGTTGGACGACCTGAGGAGGATGCAGAAGCCGCCGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAATGGAAGEKTASSLLLGVRGYTSTLKNASTASCRLSAGHPIEVTLWEASPPALSHFSVHCPDLPSFNGNLLGAPQAIAAAVDDADGQLLLLLRVPIDQLGAPHDNDYLVYHPDPPSPKLDLLPNPPPPTLGDHQLAILSCGDDRYVVAALHVWSEFTSTLRLYRSSCSSGSWTSEEVSVEEPVRDRLCPIPDSAKRQLYHVTTKTITLGGAKGTVGWVDLWRGILLCDVLDEMSPRKLRDMPLPWPAKGNWRMYLNGDVSFCRDIAISQHKDSIKYLEMEIVSPRTVTTTIPTSTSADPTSYLEWVRRSREPQPTRRRSVFHPGSWRITTWSMPIPVTSWDDWRRDCTAESREVHLDTNPSHHYELLHSLMLSNSGDEHREEAQGQGATSSLSLGRLRLCYPALSCIDDDVVYLLGNAAGRGAKTGGMMVAVDVRNKELRGVAKLDPEKNTLYSMRCYLATGISKRLNTTTDTRVGRPEEDAEAAE</aaseq>

Gene Sequence

<dnaseqindica>1..1420#2006..2052#ATGGCCGCGACTGGCGGCGCCGCCGGGGAGAAGACGGCCAGCAGCCTCCTGCTCGGCGTCCGGGGCTACACGTCCACCCTCAAGAACGCCTCCACCGCCAGCTGCAGGTTGAGCGCCGGCCATCCCATCGAGGTGACTTTGTGGGAGGCGTCCCCGCCTGCCCTCTCCCACTTCTCCGTCCACTGCCCCGATCTCCCATCCTTCAATGGCAATCTGCTTGGCGCGCCTCAAGCCATCGCCGCCGCCGTCGACGACGCCGACGGCCAGCTCCTCCTCCTCCTCCGAGTCCCCATCGATCAGCTTGGTGCCCCGCATGACAACGACTACTTGGTCTACCATCCGGATCCCCCGTCTCCGAAACTGGATCTGCTCCCCAACCCGCCTCCCCCTACCCTCGGTGACCACCAGCTCGCCATACTCAGCTGCGGCGACGACCGCTACGTCGTGGCCGCCCTCCACGTCTGGAGTGAGTTCACTTCCACGCTGCGCCTGTACAGATCTTCTTGTTCGTCTGGGAGTTGGACATCGGAGGAGGTGTCCGTGGAGGAGCCGGTGAGGGACAGGCTGTGCCCGATCCCGGACTCAGCCAAGAGGCAGCTGTACCACGTCACCACCAAGACCATCACGCTCGGAGGTGCGAAGGGCACCGTGGGCTGGGTTGATCTCTGGCGCGGCATCCTCCTCTGCGACGTGCTCGACGAAATGTCTCCAAGGAAGCTCCGCGACATGCCGCTGCCGTGGCCGGCCAAGGGCAATTGGAGGATGTACCTCAATGGAGATGTGTCCTTTTGTCGGGACATCGCCATCAGCCAACACAAGGATTCCATCAAGTATCTGGAGATGGAGATCGTTTCACCAAGAACGGTGACCACCACCATACCCACCTCCACCTCTGCAGATCCTACTTCATACCTTGAATGGGTTCGCCGCAGCAGAGAACCTCAGCCGACACGGCGACGCTCCGTGTTCCACCCTGGTTCGTGGAGAATCACTACATGGAGCATGCCTATCCCGGTCACTTCATGGGACGACTGGCGCCGTGACTGCACTGCTGAATCGCGTGAAGTCCATCTTGACACCAACCCAAGTCACCATTACGAGTTGCTTCATAGCCTCATGCTCAGCAACAGCGGTGATGAACACAGGGAGGAGGCTCAAGGTCAAGGGGCAACCTCTTCCTTGTCCCTAGGTCGCCTGCGTTTGTGTTACCCGGCCTTGAGTTGCATCGATGATGATGTTGTTTACCTCTTGGGCAACGCTGCTGGCAGGGGTGCTAAGACGGGAGGAATGATGGTCGCTGTTGACGTCAGGAACAAGGAGCTGCGAGGAGTGGCCAAGCTTGACCCCGAAAAGAACACCCTCTACTCCATGCGATGCTACCTTGCAACTGGGATCTCCAAACGCCTCAACACTACCACAGGTACTTAATTACCGCTCGTATTCCAGAACAAATGCAGCACCATGTGCATATGGGTAATAAAATGCCATTTAAGGATCTAGGGCTGATCATTATAGTTCTTTGTTTATGATGGTCCGAATGACCAAACTAGGACTAGAATGTAGTAACTTTATTTAGGGTGATAGGCTTGATATGTTGATACAAGGGCAGAACAGTACCAAGAGTCCTTTTGGCAGAGTAGTACCAATACTCATTATGCAATATACTGTTTTGTGTGAGTTTCAGACAAACGTTGTGTTTCTAACTGTACTTGCAAAAACAAAACCTGAACTCTGTTAACAGAATAAAGACACCTCCACTAAAATGTCGACGACTAATGCATAAAATTATTTGCGTTCTTCGTGAAAATTCATAGCAGTAAATGTGTCGTCACTCTTGTTTCCTTGTCATTATGCGTGTAATATATTTTGCTAGCATGCATTTAAATATGAAGTAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTATTCTTGCTTCAAGGACATTTAATGAGATAATAGCTATTTTATTTGATGTAGACACAAGAGTTGGACGACCTGAGGAGGATGCAGAAGCCGCCGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020520