Os07g0668700

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Revision as of 08:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0668700| Description = Lipase, class 3 family protein| Version = NM_001067116.1 GI:115473964 GeneID:4344227| Length = 4866 bp| Definition ...")
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Gene Name

Os07g0668700

Description

Lipase, class 3 family protein

Version

NM_001067116.1 GI:115473964 GeneID:4344227

Length

4866 bp

Definition

Oryza sativa Japonica Group Os07g0668700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28900703..28905568

Sequence Coding Region

28901583..28901652,28902951..28903030,28903222..28903287,28903538..28903585,28903704..28903771
,28903844..28903916,28904021..28904182,28904357..28904551,28904851..28904927
,28905017..28905218

Expression

GEO Profiles:Os07g0668700

Genome Context

<gbrowseImage1> name=NC_008400:28900703..28905568 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28900703..28905568 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggtggagatgcgtcagtgtgttggctctggtgctcttgctgtcaaatgcttcccatgggagagatatctctgtccagcactctcagcaaactttgaactatagccatactcttgccatgactcttgtggaatatgcttctgctgtgtacatgacagatttaacagctctttatacatggacgtgctcaaggtgtaatgacttgactcaaggctttgagatgaaatctctaatcgtggatgtggagaactgcctacaggcattcgttggtgtggattataatttaaattcaataattgttgcaataagaggaactcaagaaaacagtatgcagaattggatcaaggacttgatatggaaacaacttgatctgagctatcctaacatgcctaacgcaaaggtgcacagtggatttttctcctcctataataacacgattttacgtctagctatcacaagtgctgtccacaaggcaagacagtcatatggagatatcaatgtcatagttacagggcactcaatgggaggagccatggcatccttctgtgcgcttgatctcgctatcaatcttggaagcaatagtgttcaactcatgactttcggacagcctcgtgttggcaatgctgcttttgcctcttattttgccaaatatgtgcccaacacgattcgagtcacacatggacatgatattgtgccacatttgcccccttatttctcctttcttccccatctaacttaccaccacttcccaagagaggtatgggtcaatgattctgagggcgacataaccgaacagatatgtgatgatagtggtgaagatccaaattgctgcaggtgcatctccacatggagtttgagcgttcaagaccatttcacatacctgggagttgatatggaagctgacgactggagcacttgtagaatcatcacagctgaaaatgttaggcaactccaaaaggatctcgccagcaacatcatcgtctccaagcactctgtcgatgtcactattgtagaacctagttcacaaacatattga</cdnaseq>

Protein Sequence

<aaseq>MERWRCVSVLALVLLLSNASHGRDISVQHSQQTLNYSHTLAMTL VEYASAVYMTDLTALYTWTCSRCNDLTQGFEMKSLIVDVENCLQAFVGVDYNLNSIIV AIRGTQENSMQNWIKDLIWKQLDLSYPNMPNAKVHSGFFSSYNNTILRLAITSAVHKA RQSYGDINVIVTGHSMGGAMASFCALDLAINLGSNSVQLMTFGQPRVGNAAFASYFAK YVPNTIRVTHGHDIVPHLPPYFSFLPHLTYHHFPREVWVNDSEGDITEQICDDSGEDP NCCRCISTWSLSVQDHFTYLGVDMEADDWSTCRIITAENVRQLQKDLASNIIVSKHSV DVTIVEPSSQTY</aaseq>

Gene Sequence

<dnaseqindica>881..950#2249..2328#2520..2585#2836..2883#3002..3069#3142..3214#3319..3480#3655..3849#4149..4225#4315..4516#actcgatcggtgccgttcacgattaggaaacacgagctccatccaatctgagatatccgggctccatttctttctccgatctacgcgtcctcacgttcgcgtcgaagcctcgctggagccgccagcgacggccacctgccctgacagcggcggcgatccatccagtgattcatcgatcctccctcatttcttcagatccagaatgtcctggatacaatttcttcagattattcagtgacaagagtagtacagtaaatttcttcagaattattcaaagacagagtggtgctcgtttgtttaattgtttatatgagaaatgcacggtttcttgcgagatcttgttgaacaaatcatggattcaggagtgacgagacagcgaaagttgatgtctttttagggtcccaccatcttgaggccttggcattggcatagcataatccggaggagggagagccgcatattctgattctctctcctcctcctcttcttctccctccaaacacagcgccgggaaagcgaccgctgggctcccactccgcattaatactcggcctcctccgattttgtttgttttgtaactttgttcatccaatccagcctctctttcttgctttcttggagttggaggtagtagctcggatgaggtcaaattctttgccccctaagcttcctttctcttctcttctccccactgataatcttgttcctcctcttctttgttcttgttcatactatgcaagggtataacttggtgtagtttccggttcgattctgggattgtttgctctgcatttcgaggctcatcaagttgggttcttttttgcttgcttatctgattcatttgatgatgggaggttggtttggatgtgtctgtaggttcatggagaggtggagatgcgtcagtgtgttggctctggtgctcttgctgtcaaatgcttcccatgggagaggtagtttcatgtgaccctttgccctaagtttccaattttgatgcttgttgggtaattgttctaagtttgcctcaatgtattccaaaatgggttaacgtttaacagaacaaatagcaaatcaaggtattagtaactgactgctttggtgggagaaagcagaccaatgcttatgcaggcatctgtaataaggtttaattttctagagaaatggggagtgctgatgatggatgagattgtcttgttcttttgattttaccaagttctgggttttggctgtcggtttggtatgaaatgaccagtaatttactggagttactggactagttgaccaagttatagctgttctgctgttgtaattggggatgcatgagcaagagtaggtgggtgacagttggaatttcttgctgccctgtccttactaatataattgatgccctaattgctgaaaaggaagacaaggttggtgggtgagtagaaaataacaacattggaaataaagaagttgatggcaagaaagataatggatataattgtgctcagagattcctattattccaaacacatatttgaaccttaaacctaatatttattgagttctcaacttctttcttgcttccttaaacttgaattccacttcattacagcttgtggattctttgcattcataaaactttgtctcaggatcctgaaatatgtgaagttcaaacatttatagagtattctttagtttggccttcaccaatgcaagcttgacactctgttggtgaaagtttatttagtactgctatatgctgcatgccatctgccatatattatatacacaacttgatcgagcattttttctgcaccacctactccgattgggcttaatttcacaagaagatttagctagcagttagcacaatttttggggcattaatagttactcgtcacatggaactgctgatttgaggtttaagattgagcttgaagctaccacaagtttaccaggccagaacgtgatactggggccacttttcctataagtttgatgccataaaaattgagaatatgaaatcagctttcggctttccttcacttatgagcaaatggggcttaatatcttaagcatgtccaaacaagtcaaatgtccttaatcaattttcttttcatttgtcaacatttgattttattaccgaatataatgtcggttcgtctgctgcataccttcgtatagtagatgtagttgatcatcaatgtttgtattcatgctctcatcatcaaaaactggagtgaactaacttttttcattataacagatatctctgtccagcactctcagcaaactttgaactatagccatactcttgccatgactcttgtggaatatgcttctgctgtaagaaacttttccttatttttacataagcagtatgtgttctaggtaacatttctgttcatgttttgcatttcacaaaggcaactgtctctctttcttgttttctccttttgccccaaaataaaatcagctactttaaaaatgaaaaaagaagaagaagaacttagctgatggctcttcgttttctccaggtgtacatgacagatttaacagctctttatacatggacgtgctcaaggtgtaatgacttgactcaagtaagaagccttcaagtttgttctgttcaattcatatttagagggatactcattaactgcgaagtaaagcttatattgttactgatggttgggggcagaatcacctcaaatgtccgcttgtcaggatctgccattcctcttaatgaatcataaaagcattttccttttcttcttctttaggaaaaatatttcttttgtcatggacaggataaatttgttgctagttttgatatgactacatttgaaatagggctttgagatgaaatctctaatcgtggatgtggagaactgcctacaggttcttatcttacaaatttcaaactaatatcataaattctcgatgatatttgagtacattaagcgtttaatgattttatttatattgtgtgacactatgtgggtgaacaatgtaacaggcattcgttggtgtggattataatttaaattcaataattgttgcaataagaggaactcaagaaaacaggtacactgattttgcacagtgtgttactgttccctgttcccatgtgatttatatcttgatttgcttactcagtatgcagaattggatcaaggacttgatatggaaacaacttgatctgagctatcctaacatgcctaacgcaaaggttattatcgctagcaaagtgtttctatctccttaagtccttttattaaaagaagatcagtgccttttttttcccctaaaatatctccacttctctgtttaaaggtgcacagtggatttttctcctcctataataacacgattttacgtctagctatcacaagtgctgtccacaaggcaagacagtcatatggagatatcaatgtcatagttacagggcactcaatgggaggagccatggcatccttctgtgcgcttgatctcgctgtaagtacccccgaggctcaaagttttactaatacatccagtgttcagattacagactcttctaagacattatagatgtaatatctgtatcacattctttccataaaaaaattgaatgccatcattggttgttatgtaaactgatacagtcttgttcttttactctgtccacagatcaatcttggaagcaatagtgttcaactcatgactttcggacagcctcgtgttggcaatgctgcttttgcctcttattttgccaaatatgtgcccaacacgattcgagtcacacatggacatgatattgtgccacatttgcccccttatttctcctttcttccccatctaacttaccaccacttcccaagagaggtatgcctcacaggcttgcacataagctaattaagaatgcgctcttgtacacttaacttggccctggctttatctattttatcactatagcacactttatgaatttttgtattaacaccctttttatatttaccattaataatacaaaatcaatgcctagtgcagcaagttgttagatgctctgcacaccttccatgggacaatgatactaatctaaatcaaatatgctaatattctttagagatgtggtgttacatcctgtacagtgtacacacataatatgcttgttcgaatttcaggtatgggtcaatgattctgagggcgacataaccgaacagatatgtgatgatagtggtgaagatccaaattgctgcaggtttagaggctcattttaacaacctaacaactcaaatctggtttttttagcttctaattataatttctgttccctcgtttatttcctaggtgcatctccacatggagtttgagcgttcaagaccatttcacatacctgggagttgatatggaagctgacgactggagcacttgtagaatcatcacagctgaaaatgttaggcaactccaaaaggatctcgccagcaacatcatcgtctccaagcactctgtcgatgtcactattgtagaacctagttcacaaacatattgaaagcaattatggatagtctacggtatttcttttatccgatttagagcaaaggatggatccttcctcttttctcgaagatgaaggcttgattagaaattcattcagatttggatgtacatacagggttcttttcatagcttgtgaatatgtagagatgtacataggatgatagattcatatttcataggtgttagttttttattttttccttttctgatgcatatgcttatgcattttgtaaatgcaataaaaacaagaatagttccacccatgtatgaatatccatacaattatctgtatctgccactgtgtaagtaaaagatatatgattatctgtgactttaggcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0668700, RefSeq:Os07g0668700