BGIOSGA020565

From RiceWiki
Revision as of 16:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020565

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020565, complete gene.

LocusTag

P0018H04.33

Ensembl Transcript ID

BGIOSGA020565-TA

Ensembl Protein ID

BGIOSGA020565-PA

Length

1859

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31716450..31718308

Sequence Coding Region

31718173..31718308,31717787..31717843,31716450..31717654

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31716450..31718308 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31716450..31718308 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGCAGCTGTGAGGAGCAAGAAGAGCAAGGGCTCTTTCTGCCACCCTCCTCTGCTCCTGCTCATCGTGGCAATCCAGTTCTTGGTGATTTACTCACCAACCCTTGATCAGTACATGGTGATGCTAACCACAGGCAAGCCTGGTTTCCCATCAATGTTGATTGATGGTAGGAGGAGCTTCAAACAAGTAGATGAGTTCATCCCGGAGCCTCACCTGCGATGCGACTTCAGAGACAATAGATCCGACGTGTGCGAGATGGAGGGCGCCATCCGCATCCTCGGCCGCACGTCGGAGGTGTTCCTGGTGGCGCCGAGCCTCGCCTCCATCTCCGGCGGCGGCGGCGGCGTGAACGCGACGGGCGTGGACGCGAACGCGACGAGGTGGAAGATCCAGCCGTACACCCGCAAGGGCGAGTCCCGCGTGATGCCCGGCATCACGGAGGTGACGGTGCGGCTGGTGACCGCCGACGAGGCGCCGCCGTGCGACGAGTGGCACGACGTCCCGGCGATCGTGTACTCCAACGGCGGCTACTGCGGCAACTACTACCACGACTTCAACGACAACATCATCCCGCTGTTCATCACGTCGCGCCACCTCGCCGGCGAGGTCCAGCTGCTGGTGACGCAGAAGCAGCGGTGGTGGTTCGGCAAGTACAGGGAGATCGTGGAGGGCCTGACCAAGTACGAGCCCGTCGACCTCGACGCCGAGCAGCGCGTCCGCTGCTACCGCCGCGCCACCGTCGGGCTCCACAGCCACAAGGACCTCAGCATCGACCCGCGGCGAGCTCCGAACAACTACTCCATGGTGGACTTCAAGCGGTTCTTGATGTGGCGGTACGCGCTGCCGCGGGAGCACGCGATCCGGATGGAGGAGGAGGACAATAGCAAGAAGCCGCGGCTGCTGGTGATCAACCGGCGCTCCCGCCGCCGGTTCGTGAACCTGGACGAGATCGTGGCAGCGGCGGAGGGGGTCGGGTTCGAGGTGGCGGCGGCGGAGCTGGACGCCCACATCCCGGCGGCGGCGTCGGCGGTGAACTCGTACGACGCGATGGTGGCGGTGCACGGGTCGGGGCTGACCAACCTGGTGTTCCTCCCCATGAACGCGGTGGTGATCCAGGTGGTGCCGCTGGGGAGGATGGAGGGGCTCGCCATGGACGAGTACGGCGTGCCGCCGCGCGACATGAACATGAGGTACCTGCAGTACAACATCACGGCGGAGGAGAGCACGCTGTCGGAGGTGTACCCGCGGGCGCACCCGGTGTTCCTCGACCCGCTCCCCATCCACAAGCAGAGCTGGTCGCTCGTCAAGGACATCTACCTCGGGCAGCAGGACGTCCGCCTCGACGTCCGCCGCTTCCGCCCCGTCCTCCTCAAGGCTCTCCACCTCCTCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MKAAVRSKKSKGSFCHPPLLLLIVAIQFLVIYSPTLDQYMVMLTTGKPGFPSMLIDGRRSFKQVDEFIPEPHLRCDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISGGGGGVNATGVDANATRWKIQPYTRKGESRVMPGITEVTVRLVTADEAPPCDEWHDVPAIVYSNGGYCGNYYHDFNDNIIPLFITSRHLAGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQRVRCYRRATVGLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAIRMEEEDNSKKPRLLVINRRSRRRFVNLDEIVAAAEGVGFEVAAAELDAHIPAAASAVNSYDAMVAVHGSGLTNLVFLPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSEVYPRAHPVFLDPLPIHKQSWSLVKDIYLGQQDVRLDVRRFRPVLLKALHLLR</aaseq>

Gene Sequence

<dnaseqindica>1..136#466..522#655..1859#ATGAAGGCAGCTGTGAGGAGCAAGAAGAGCAAGGGCTCTTTCTGCCACCCTCCTCTGCTCCTGCTCATCGTGGCAATCCAGTTCTTGGTGATTTACTCACCAACCCTTGATCAGTACATGGTGATGCTAACCACAGGTACGCCGTAATCATAATCGTTTTGTATTCTTCAGTTTGTATGTTGATTAGTAGTACTGTCAGAGAAGCATATGCTGTTTGTCTTGTCGATACTCCATTCCTGTGCATATTTGGAAACAGTTGCTGAATCCTTTCAAGAAAACAAGTTCCTTTATTTGTTGGGATAAAATGGTAACAGTTGCCGAATGATGAATTGATTAGTTCGTTGACAATGTCCATCATGGATTCATGATAGGCTACTGCTCACGTTAGGATATCAGCATCTGTTGTTATTCCCATGTTCTTGTGATCGAAATGGGTTAACTGACATTGATGGGTTGTCCCTGCAGGCAAGCCTGGTTTCCCATCAATGTTGATTGATGGTAGGAGGAGCTTCAAACAAGTAGGTATGTGTCACATAATCTTGGGAATTTCAAACCCCACAATGTGATTAATTTCTGACGTTGTTGATTCTGAGTTTATCTTGGAGAAAAGATTCTGATTTTGTTTTAATTTGCTCGATGAAATTCTTGATGCAGATGAGTTCATCCCGGAGCCTCACCTGCGATGCGACTTCAGAGACAATAGATCCGACGTGTGCGAGATGGAGGGCGCCATCCGCATCCTCGGCCGCACGTCGGAGGTGTTCCTGGTGGCGCCGAGCCTCGCCTCCATCTCCGGCGGCGGCGGCGGCGTGAACGCGACGGGCGTGGACGCGAACGCGACGAGGTGGAAGATCCAGCCGTACACCCGCAAGGGCGAGTCCCGCGTGATGCCCGGCATCACGGAGGTGACGGTGCGGCTGGTGACCGCCGACGAGGCGCCGCCGTGCGACGAGTGGCACGACGTCCCGGCGATCGTGTACTCCAACGGCGGCTACTGCGGCAACTACTACCACGACTTCAACGACAACATCATCCCGCTGTTCATCACGTCGCGCCACCTCGCCGGCGAGGTCCAGCTGCTGGTGACGCAGAAGCAGCGGTGGTGGTTCGGCAAGTACAGGGAGATCGTGGAGGGCCTGACCAAGTACGAGCCCGTCGACCTCGACGCCGAGCAGCGCGTCCGCTGCTACCGCCGCGCCACCGTCGGGCTCCACAGCCACAAGGACCTCAGCATCGACCCGCGGCGAGCTCCGAACAACTACTCCATGGTGGACTTCAAGCGGTTCTTGATGTGGCGGTACGCGCTGCCGCGGGAGCACGCGATCCGGATGGAGGAGGAGGACAATAGCAAGAAGCCGCGGCTGCTGGTGATCAACCGGCGCTCCCGCCGCCGGTTCGTGAACCTGGACGAGATCGTGGCAGCGGCGGAGGGGGTCGGGTTCGAGGTGGCGGCGGCGGAGCTGGACGCCCACATCCCGGCGGCGGCGTCGGCGGTGAACTCGTACGACGCGATGGTGGCGGTGCACGGGTCGGGGCTGACCAACCTGGTGTTCCTCCCCATGAACGCGGTGGTGATCCAGGTGGTGCCGCTGGGGAGGATGGAGGGGCTCGCCATGGACGAGTACGGCGTGCCGCCGCGCGACATGAACATGAGGTACCTGCAGTACAACATCACGGCGGAGGAGAGCACGCTGTCGGAGGTGTACCCGCGGGCGCACCCGGTGTTCCTCGACCCGCTCCCCATCCACAAGCAGAGCTGGTCGCTCGTCAAGGACATCTACCTCGGGCAGCAGGACGTCCGCCTCGACGTCCGCCGCTTCCGCCCCGTCCTCCTCAAGGCTCTCCACCTCCTCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020565