Os07g0670000

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Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0670000| Description = Protein prenyltransferase domain containing protein| Version = NM_001067126.1 GI:115473984 GeneID:4344238| Length = ...")
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Gene Name

Os07g0670000

Description

Protein prenyltransferase domain containing protein

Version

NM_001067126.1 GI:115473984 GeneID:4344238

Length

2217 bp

Definition

Oryza sativa Japonica Group Os07g0670000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28995540..28997756

Sequence Coding Region

28995562..28997742

Expression

GEO Profiles:Os07g0670000

Genome Context

<gbrowseImage1> name=NC_008400:28995540..28997756 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28995540..28997756 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccactacggcggctgcggatccgcacgctctccaccgctgccgcccaccacccgttcgacggaattccccacccgtcgctcgcccgccaccgccgcgtcaaccccatcgccttctcggccgccgtcagggcgtccgacccggcctccctcccggcgctccacgccgtcgccgtaaccaccggcctccacggcttcgccgccgtgaccaactccctcgccgcccgctacgccaagaccgggtcgttcccttccgccgtcggggtgttcgccgcggcgcgggcgagggatgtcagctcctacaacaccatcctctccgcgttccctgacccggccgaggcgctcgacttcgcgtcgtggatgctccgctccggcgccgtgcggcccgacgccgtcacgtgcaccgtcgcgctctcgctggccgccggccggggggagggcttcctcgtgcggcagctgcacgcgctggcttggcggtccgggctcgcggctgatgtgttcgtcggcaacgcgctcgtcactgcgtactcacgtggagggtctctcggggaggccaggagtgtgttcgacgatatgccggcgagggacctcgtctcatggaacgcgttgatctgcgggctcgcgcaagacggcgactgcccggccgaggtgattggcgtgttcctccggatgctcagggacggcgacgtccagcctgaccggatatcggtctgcagcgtgatcccggcatgtggcggcgaggggaagctcgagctcggccggcaagtccatggctttgcggtgaagctgggcgtcgagggatacgtctccatcggcaacgtgctcgtcgcgatgtactacaagtgcggcgctcccggcagcgcccggaggctgttcgacgccatgagcgagcgcgacgtcgtgtcatggaccacggccatctccatggacggcgaggacgccctcacgctgttcaatggcatgcggcgagacggcgtgccgccgaacgaggtcaccttcgtggcgctgatgtcggcgctgccagcggactgtccggcgaggggagcgcagatggtccacgcggcgtgcctcaaggccgccgtgtccggcgaagcggcggcgtcgaacagcctcatcaccatgtatgccaaggcgcgtcgcatggacgacgcgaggatggtgttcgacctcatgcctcgccgggagatcatcgcgtggaacgctgtgatctcgggctacgcgcagaacggccggtgcaacgacgccctcgagctcttctcgtccatggccaggtgcctgacacccaacgagaccacgttcgcgagcgtcctcagcgcggtgaccgcggtggagacggtgtccatggcgtacggccagatgtaccactccagggctctcagcatgggcttcggcgacagcgagtacgtcgccggcgccctcatcgacatgtacgcgaagcgtggcaacttggaagagtcccggaaggcgttccacgagacggagcagcggagcctcatcgcctggacggcgatcatctcggcgaacgccaggcacgggagctacggcgccgtcatgagcctcttcggcgacatggcgcgctccggcgtcgcaccggacggcgtcgtgctcctcgccgtcctcacggcctgccggtacggcgggatggtcgacgccggcagggacatcttcgactcgatggctgccgatcgcggcgtcgagctgtggccggagcactactcctgcgtcgtcgacatgttaggccgggcagggaggctggcggaggctgaggagctcatgatgcggatgccggcggggccgagcgtgtcggcgctgcagagcttgctcggagcctgcagaatccatggcgacgcggagatcggcgagaggatcgccagaattttgacggagaaggagccgacggagtccggcgcgtacgtcctcctgtcgaacatctacgccgacgtgggcgactgggacggcgtcgccaaggtgaggaggaagatgagggacagaggcgtcaagaaggagatcgggttcagctgggtggacgccggcgctggcgaggcactgcatttgcacaagttttcgtcggacgacacgacgcatccgcgtacagaagagatatacgcagtggccgatgtgttaggctgggagatgaaatttctgaagaattgttcgcaaatggaaatgatcttgatctga</cdnaseq>

Protein Sequence

<aaseq>MPLRRLRIRTLSTAAAHHPFDGIPHPSLARHRRVNPIAFSAAVR ASDPASLPALHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYN TILSAFPDPAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRS GLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVI GVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLV AMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDGEDALTLFNGMRRDGVPPNEVTFV ALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMP RREIIAWNAVISGYAQNGRCNDALELFSSMARCLTPNETTFASVLSAVTAVETVSMAY GQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISAN ARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVE LWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIA RILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVDAGAGEA LHLHKFSSDDTTHPRTEEIYAVADVLGWEMKFLKNCSQMEMILI</aaseq>

Gene Sequence

<dnaseqindica>15..2195#aaaaactacactagatgccactacggcggctgcggatccgcacgctctccaccgctgccgcccaccacccgttcgacggaattccccacccgtcgctcgcccgccaccgccgcgtcaaccccatcgccttctcggccgccgtcagggcgtccgacccggcctccctcccggcgctccacgccgtcgccgtaaccaccggcctccacggcttcgccgccgtgaccaactccctcgccgcccgctacgccaagaccgggtcgttcccttccgccgtcggggtgttcgccgcggcgcgggcgagggatgtcagctcctacaacaccatcctctccgcgttccctgacccggccgaggcgctcgacttcgcgtcgtggatgctccgctccggcgccgtgcggcccgacgccgtcacgtgcaccgtcgcgctctcgctggccgccggccggggggagggcttcctcgtgcggcagctgcacgcgctggcttggcggtccgggctcgcggctgatgtgttcgtcggcaacgcgctcgtcactgcgtactcacgtggagggtctctcggggaggccaggagtgtgttcgacgatatgccggcgagggacctcgtctcatggaacgcgttgatctgcgggctcgcgcaagacggcgactgcccggccgaggtgattggcgtgttcctccggatgctcagggacggcgacgtccagcctgaccggatatcggtctgcagcgtgatcccggcatgtggcggcgaggggaagctcgagctcggccggcaagtccatggctttgcggtgaagctgggcgtcgagggatacgtctccatcggcaacgtgctcgtcgcgatgtactacaagtgcggcgctcccggcagcgcccggaggctgttcgacgccatgagcgagcgcgacgtcgtgtcatggaccacggccatctccatggacggcgaggacgccctcacgctgttcaatggcatgcggcgagacggcgtgccgccgaacgaggtcaccttcgtggcgctgatgtcggcgctgccagcggactgtccggcgaggggagcgcagatggtccacgcggcgtgcctcaaggccgccgtgtccggcgaagcggcggcgtcgaacagcctcatcaccatgtatgccaaggcgcgtcgcatggacgacgcgaggatggtgttcgacctcatgcctcgccgggagatcatcgcgtggaacgctgtgatctcgggctacgcgcagaacggccggtgcaacgacgccctcgagctcttctcgtccatggccaggtgcctgacacccaacgagaccacgttcgcgagcgtcctcagcgcggtgaccgcggtggagacggtgtccatggcgtacggccagatgtaccactccagggctctcagcatgggcttcggcgacagcgagtacgtcgccggcgccctcatcgacatgtacgcgaagcgtggcaacttggaagagtcccggaaggcgttccacgagacggagcagcggagcctcatcgcctggacggcgatcatctcggcgaacgccaggcacgggagctacggcgccgtcatgagcctcttcggcgacatggcgcgctccggcgtcgcaccggacggcgtcgtgctcctcgccgtcctcacggcctgccggtacggcgggatggtcgacgccggcagggacatcttcgactcgatggctgccgatcgcggcgtcgagctgtggccggagcactactcctgcgtcgtcgacatgttaggccgggcagggaggctggcggaggctgaggagctcatgatgcggatgccggcggggccgagcgtgtcggcgctgcagagcttgctcggagcctgcagaatccatggcgacgcggagatcggcgagaggatcgccagaattttgacggagaaggagccgacggagtccggcgcgtacgtcctcctgtcgaacatctacgccgacgtgggcgactgggacggcgtcgccaaggtgaggaggaagatgagggacagaggcgtcaagaaggagatcgggttcagctgggtggacgccggcgctggcgaggcactgcatttgcacaagttttcgtcggacgacacgacgcatccgcgtacagaagagatatacgcagtggccgatgtgttaggctgggagatgaaatttctgaagaattgttcgcaaatggaaatgatcttgatctgatacatcagtataaaattaatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0670000, RefSeq:Os07g0670000