Os07g0671500

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Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0671500| Description = Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17...")
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Gene Name

Os07g0671500

Description

Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17)

Version

NM_001067134.1 GI:115474000 GeneID:4344247

Length

6738 bp

Definition

Oryza sativa Japonica Group Os07g0671500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29053728..29060465

Sequence Coding Region

29053728..29054063,29054841..29054942,29056519..29056808

Expression

GEO Profiles:Os07g0671500

Genome Context

<gbrowseImage1> name=NC_008400:29053728..29060465 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29053728..29060465 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatcataacttagactacaagggaagtggtgctcttgaagagcttgagatgttaacagtgaatgccaaagaagcccaagagctcatattgacgaaaatccttgagaggaatcaggctaccgagtacctgagcaaattcatgaatgggtcaacaaatatttctgccttcaagagacatgttcctgtagtaacatatgataaggtacatccatacattctcaggattgcaactggtgaggaatcttcaattttatgtggagaatatatcttggagctgcttagaagctcggggacttctcgaggtgagccaagattgatgccgtccatcttaaaggatcttgaccgtcgaacctacctctatagtctgatcatgcctatcatgaacaagtatatatcaggccttggtgaggggaaagctatgtaccttctctttgtgaaagctgaaacactgacagattctggaattccagttcgatcagtcctcactagctactataagagccctcatttccttcaccgcaaacacgatttatacaacaactataccagtcctgatgaggtcattctttgccctgatagccagcagagcatgtactgccagctgctctgtggcctggtagaacgccagcatgttcttcgtatcggggcagtctttgcctcagcattccttcgatctatcagcttccttgagcagcattggcgtgaccttgtcaatgacatacg</cdnaseq>

Protein Sequence

<aaseq>MDDHNLDYKGSGALEELEMLTVNAKEAQELILTKILERNQATEY LSKFMNGSTNISAFKRHVPVVTYDKVHPYILRIATGEESSILCGEYILELLRSSGTSR GEPRLMPSILKDLDRRTYLYSLIMPIMNKYISGLGEGKAMYLLFVKAETLTDSGIPVR SVLTSYYKSPHFLHRKHDLYNNYTSPDEVILCPDSQQSMYCQLLCGLVERQHVLRIGA VFASAFLRSISFLEQHWRDLVNDIR</aaseq>

Gene Sequence

<dnaseqindica>6403..6738#5524..5625#3658..3947#tcgtcttctttcgtctccactctctcgtcgtcgtcggtctcggggcccgacggggtctcgacgccgccttccatccacggcggccgccggtggcgatctggctcctcctcctcttcatccaccgcgcattacgttccgtacaacgagagctctcccttccaccggcctgcgtttgcatatccatccctccgcccgccttcctcgccgcgatccaggaggatgccgccggagcaagccggagacctcgccgccgttgtgagcaaaattctgacacatttttttggaagtaacattacttaggtttatcgctagttagtcgttggattgcggctattcctcgctagttgtaaaatactccgcccgggggggataaactttatgtcatctgattgcaactgtaaatcctctgggtaggcgagttcaagccgattcaacaatgccgccatgggaggagcagcagaagcttcctcatcagagagagactccatgaaagggcgcacaaagaagctcctagtagataaggtatacctagcccaatgatcggatctgtgcaggggactccacgagcaagcgcgcgtggcttgaattcactcctgaaatcgacgtgctgtgctaactgtagcctgtaggagtgtagggggtagaggaggctggtcctgtgctctcttatctagcagggtggctggtgagggttagttcattctttgatgtcccccaccatcctaatccaaagagaagctatgctaggttattagggaggggaaacaccactgatgagatatggagggagggggcctggcctccctcctggctgtccctgttcttgatgtgaagaaaggggcaccaatctctgacttgtttctgcctcagcacagttcattcccctcacaggcatgcttgcacctccatcatgaaagtgtccctcctccctcagcctccccttctttggtcttttcccacctttatgctgtgctacaatgagaaccgccgtcgctcgcgcacccgattggcctgcgtgagaatcgactcacctccttcttaataacatcgatatgatagcctcctttcatatccagctttttttaatgctgtgctacaatttagtttaagttattgacttttttttttgctttacctttggtttagctctgatgtatttctccaaaaactttaggagacatggaaacaggagatgcttgcttgagaatttttttgagatattacgtaatcgctagctttatggtgatgctgacttgagtgaactatactagagaacatgaacgtggaaagatatgccctttttaccttgaaagaagcagattgctctgcttgcctaatgctgtgcccactaagaagctcaagaagcatggtggatgcattttagtgtttggtaaaatgtcgaagctcaagaagcatgtatgtataatagctgctgaatgtttcatttcttgcacatgtggctattcagatcatggaggatgcaggccactttgaaggggttttttttttcattagtttctgttgtggagcgagaaggttagatagatctcacaaggacaaggagaaagaaatctggggatatatgacaataatgatattacaagggatccaataactcatctttcctgattaatccttacaactttagcaaagaatatgtgcaccgtttccccttttttgtgaaggtagttaatagacgaagagcagggggcatggcaccaccacagggagtgcaccatatgcggcgagcatccgcatactgtaaatgcatgcctttaccctgaaatgactagataatatcataaagaaagtatgatgcctgggattgtcacctacgcgtttattccatcgatatcaccttttgaaaatggctaggggtacggtagaattccgctttctattgtgataatgtgatattcaattgaaaggaattggtatgtgaaataatctgcagctgccacctttgtagcaggtgtaagtcagtagagctcagctgatgtactgatattttgagcatatgcatgcgcaggctctttaccttcctgagtaacctgttctttttactattgaatcatccttggatgcttcaagttggggatgcacctagtatggaatttggtgtttgtttatagccgtatgttttgttgattcagtgaccttgggaccttgcaaactaaggctagcattgttcccttctaacgccttatgttacacgaaaccttcagatgctgttacaactttcctggaataacttttttagtgtacaaaatatgttattgtctccagtattatctactttactgatgtgtttcattgtgtgcgaccttgtaccacggcagtgtattccttagttgcattattgacaactttatcatgatctgacaaatatcattattgtgtgtgcaccttttgcctcatcatcttggtggatgttttttttttccactggaatattgtttacctgtggtctatgtgctttgatttgtcattgtcagcatctccatgcccagttccatatgaaattgcagtcaaaagagttcacatttttttttgcatgaattaaactttgttctgtttttgccagcagcttcatgcttaggtccatgggattgtgtggcaatgtaaacatgtttttttcttctgtttactccttttgaccacaatactaatattatgatttttgagcattgtagatggtctctgcttctggagagtggagactctggttagcatcagtcacttgacccactacaaataatagaagttcctgggatgaagaaccaataactgtcagccacaaccctttgtttgcattcttattacctttgttacttagtctccgctagattatccatctcctttgattgaggttaatcatgtccttttgatccaactggtttaaaagttacaacttttcatctaggtggtgcatttgttattaatttgttaaccacaatccatggcatggtactattcaccttttcttgatacataaaacatttcattcaaaaaatggaagtggatcaggtttacacttttgtcactcacctctcctaggatcttcaactcagttctagcttttccaacctattttttctatcattaccacaaaaagattgccctttacttactggttacccaagtatagtgtcttttgcctatccctacatgcctcatgttttcttcatggctaggagtttgtagtgatatttcaagactagtgcaaatatttcatattttttcttcatgacaaaggggaccttcttaaaggtacatcgtgagaaacaggtggagttctgcgtcacacagcaaagcaaggcaatggataatggaggacagcgtcttgatataatttttaagttttcaacatattatcacatcacattacacttttcaatagaacactactagagggagttccataaattgagacactgtcgtgtccagaaagatagcaagtggatcatcttgcacaggctgcaccgtcgtattggttcagaatctttcaaataaagtcgaaatattaagaagatatgcttctcagaccatgcatcaccacactatataaggggcaaacaagctcccagtatcgttactttgagcccccgcctccccttttgaaataaggttgactgtaattctgcttttgttcgtaatatggatgatcataacttagactacaagggaagtggtgctcttgaagagcttgagatgttaacagtgaatgccaaagaagcccaagagctcatattgacgaaaatccttgagaggaatcaggctaccgagtacctgagcaaattcatgaatgggtcaacaaatatttctgccttcaagagacatgttcctgtagtaacatatgataaggtacatccatacattctcaggattgcaactggtgaggaatcttcaattttatgtggagaatatatcttggagctgcttagaaggtgcgcctctcatttcaatgcattcatcagttcacatctctttcctgtgtatggtagagatagtagcaaccaacatatattggttggcaatctggcaggccctacatgtacttgcctttgatagaagttggttttagtgcacttggtggttaatgggagaaaaataagttctcttggtacttgctaggctgctgttaatgactgtcataaatccagaggcacagaccgagcttcgcttaggaaaaattgtttatatttattttttggaatgtgctaggctagaaatgactggtcatactaagctacttgccttgtaagttagtagtcgaaatggttgtttagcagagtttaaagttgaggagaaaaaaaaaaactctggtgcccctcactaaacgaggaatggttggttgtgagagggtgattgagggtaagatgagaagtttgaatgggaggtgactgataggatgaatagtgctagaagtgtttatattttggtacaaatttcgaatgctagaattgcttatattttggaatagagggataacctaaggacttctatagagtaatttgcttgtaaaaggaggatgtcatgttgtgatattcctctcgcagatgtgttgcaaagtcctgtcaaccctacaaggcgcatgggactgttatgctaaatagctaagatggtgataaattcaaatcatgttgtattctatttgttcctgacaaccagctaatgtaaaaaattctatatgtctatataacaatttgttgcgaacgggcctgtagccaaaggttacagtgctcaagtagcacctctaggtcctgggttcaactccccatgggagcaaatttcaggcctagtaaaaacaagtcactcgttggccgggcagggacctcaaaccacaggttaaggaccgatccatagagggcgagtccgcgtgtgtggggccagggtttgtggcttttcttggccgctttggttgaggcttcttctaaatgaaaagccgtgagggcggtcattcccctgccggtcgaatttttttaaataacaatctgtttaagctattctgactcaggatcttctaagtgatcctctctatatggaaggaccgaagtaattagcaaagtacatacaaaatgcagaagttctattaccaaagtatgtataaatattttctcttgctcctacctttgaggatataatttttcaagaacacacagaagagatgtgcatattttgcatcaggcagaagaaagagtaagaaataattcccattaggccagacccagaatatactcatcataagcaaccacaatctatgtaaacaactagggcccgcctgcaaaagaatagacaacaagttgccaacaaaagtagatacatcagtttacaaatatatcatctgcttcttgaagaaataccctaatgtttgatccatgccctataatatatccctctttactgtcattaaagaaattactgttaatattaggccttattgtgtttaaagaatttaatacagggccttgctattcacttagtgactgtgcttttgatgctaattacataattaatttgtagctcggggacttctcgaggtgagccaagattgatgccgtccatcttaaaggatcttgaccgtcgaacctacctctatagtctgatcatgcctatcatgaacaagtaagtttatatcttcttatggaaatattgtgatgtggttatgacaacttcattattgtgtaatatctggatccagttgtatgcctaatctcctttctgcaattttctaaccttcttattcttgcaaaagtaatgagataagtagttaattattgcattaaccaaattttgtttttgtttgcctcaaacagatgatatcatttgtgaagctctgttgacactgaccctaaaattgacagatcctgagaggcgttgttttgcatgcttcctgtttgacatttttttttggattattcacattagtaacacaacctgggtccagtactccagttgcaagacgcaaagtattggacaatagttaccgcatatgccactgcttgcagctcaaaaacttaaaaataagttcatatattggttgctgctttagcaaagtatcaggcaatgccagatatacatttgctacctcataccacatcaagaaaccaactgttatacacagctgttttggtgtttctaaaatccacactattaatgcttccaaaggtaattatgtttaatatggtacctgaattttggactaaactgaatggcaccctcagatgcaacttagctcaaatgcttttgttcctgactgtattaatatccagtacataaatttgttagatagcaccatagcagtagcgcacagatatatcttccagagttccaaaggtttatcaagagtttccagacagatttgtcttggactggcaatttatgtcataatccaatctgcaggtatatatcaggccttggtgaggggaaagctatgtaccttctctttgtgaaagctgaaacactgacagattctggaattccagttcgatcagtcctcactagctactataagagccctcatttccttcaccgcaaacacgatttatacaacaactataccagtcctgatgaggtcattctttgccctgatagccagcagagcatgtactgccagctgctctgtggcctggtagaacgccagcatgttcttcgtatcggggcagtctttgcctcagcattccttcgatctatcagcttccttgagcagcattggcgtgaccttgtcaatgacatacg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0671500, RefSeq:Os07g0671500