Os09g0482640

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0482640| Description = EGF-like calcium-binding domain containing protein| Version = NM_001188967.1 GI:297727064 GeneID:9266455| Length = 3...")
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Gene Name

Os09g0482640

Description

EGF-like calcium-binding domain containing protein

Version

NM_001188967.1 GI:297727064 GeneID:9266455

Length

3181 bp

Definition

Oryza sativa Japonica Group Os09g0482640, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19204382..19207562

Sequence Coding Region

19206012..19206180,19206291..19207459

Expression

GEO Profiles:Os09g0482640

Genome Context

<gbrowseImage1> name=NC_008402:19204382..19207562 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19204382..19207562 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtacaaaatttttctaaattctccctttcagatatcgacgagtgcgctctgccagaagaatatccctgctacggtgaatgcacaaacaagccaggatcgttttcgtgcatgtgtccgggtgggacgcacggtgatgctatgaacgaaggaggatgtgaaccaacgactctccttgtggcgataggaggaaccatcggcataggaattccatccgtgttcgtgataggcatggcaatgacgaacatgatcaaggcacggagggccaagaaactgagagccgtattcttcaagcagaaccggggtttactgctgctgcaacttgttgataaggtgattgctgaaaggatggtgtttaccttggaagagctcgaaaaggcaacaaatcgattcgacgagatgagaaagctcggcagcggcggccatggcactgtctacaaaggcaccttgccagacagacgtgtcgttgccatcaagaaatcgaatattacggttcgtaaggagatcgatgatttcataaacgaagttgtcattctttcgcagatcaaccatcggaatgttgtgcggttattcggatgttgccttgaaacacaggttccactactggtctacgagttcatatcgaacggcactctttccgaccatctccatgttgaaggccctacattgttgtcatggaaaaatagattgaggattgctcttgaagctgcaagcgctttagcctacttacattcatccgcttcagtatcaataattcatagggatgttaagtctgctaacatattgcttgatggtcgcttaacagcaaaagtttcggactttggagcctctcgaggcattccggttgatcaaggtggtgtgacaacagtgatccaaggcacatttggatatcttgatcctgaatactatcaaacaagtagattgaccgataagagtgatgtgtacagttttggtgtcatactcgtggagatgctcacaaggaagaagcctactgtttttgaatcatcagataatgtcagcctaattgcactttttaatttgctaatggtacaggacaacatctacgagatattagaccctcaggtaatttcggagggcatggaaaatgtgaaagaagtcgcggcgctagcatcggcatgcctaagattgaagggggaagagaggccaacaatgaggcaagtggagataaggctggaaaggctgttaggcggtgacattttgcaagggctttcagctgagctgcactgtctaccacctcaactgagcaataccgacactactagcaagctatacaacatggagcgggattttttgctatcgtcgagcttcccacggtga</cdnaseq>

Protein Sequence

<aaseq>MVQNFSKFSLSDIDECALPEEYPCYGECTNKPGSFSCMCPGGTH GDAMNEGGCEPTTLLVAIGGTIGIGIPSVFVIGMAMTNMIKARRAKKLRAVFFKQNRG LLLLQLVDKVIAERMVFTLEELEKATNRFDEMRKLGSGGHGTVYKGTLPDRRVVAIKK SNITVRKEIDDFINEVVILSQINHRNVVRLFGCCLETQVPLLVYEFISNGTLSDHLHV EGPTLLSWKNRLRIALEAASALAYLHSSASVSIIHRDVKSANILLDGRLTAKVSDFGA SRGIPVDQGGVTTVIQGTFGYLDPEYYQTSRLTDKSDVYSFGVILVEMLTRKKPTVFE SSDNVSLIALFNLLMVQDNIYEILDPQVISEGMENVKEVAALASACLRLKGEERPTMR QVEIRLERLLGGDILQGLSAELHCLPPQLSNTDTTSKLYNMERDFLLSSSFPR</aaseq>

Gene Sequence

<dnaseqindica>1631..1799#1910..3078#agtatttcttctgctgatcgagccactgaatcgatcagctccatggcgccctctcctgttatccttgttatggctgcactgtttctccaagctgcaacaatggcggcaacaaccgcgctaaccgtatcgctgccgggctgcccgagctcgtgcggcagcatggtcatcccctacccgttcggcgtcggcgccggctgccacctcgccggcttcgccgtcacctgcaaccgctcctaccacccaccgaagctcttcctgcgcgacgccgacgccgctgaggtgctcgagatatccctcctaaactccacggtgatcgtcagcagcgccgtccggtacgacgccgccaaaggcgagggcgcgtggggccgcggcctcgccggcgcgttccgcctcagggagcggcggaaccggctcgtcgtcgtggggtgcaacctgcaggccgtcctcctggacggcgacgacatcgccgccgcgtgcaccaccatctgcggcggcgccggcgccacctggccagcagcggccgacggcgagctcgcggattactcgtgcgcgggcgttggctgctgccaggcttccatctacctaggcctcacgtcgtacggcgttcggctgtcgccgttcggcacaagcaccgggccgccgccgccgccgccgacctcctccgcctcgtcgtctaaccaatcggattcggctctcgtgttcgtcgcggacaacgagtggttcggcgggaacgcgagtaagctcggatcagcagcagcgacgatgcgaccgggcggcggcggcatgccggtggcgctggccgtgctcgactgggcgatcgggaagtcggggtgtccgccgcatgggcccgacgacacggcctgtagcagcagcaacagctactgccgcaactctaccagcacctcgcttggcggctactcgtgccagtgcgacaacgggtaccaaggcaatccgtacgttgcaaatggatgtcaaggtaatttgttactccctacttccctaaatgtttgatgccgttgactttttaaaacatgtttaaccgttcatcttatttaaaaacttttgtgaaatatgtaaaactatatatatacataaaagtatatttaacaatgagtcaaatggtaggaaaaaattaataattgcttaatttttttgaataagacgaacgatcaaacatatttcaaaaagtcaacggcgtcaaacatttagggatggagggagtataagggtgtaaccatgtaagtggagaaacaactgagggtcttctgattagcttcacaaggtggtgggctagctgttctgggttcgatgcctcacccttctatttagtttgatattaaatcatttcctaatattttagcttataagtgtgtttaacggattagtcatttacacttgaagttgcataagtatagcctctcatcgtttgcttgctagattatgagccgcggctaaaatttaaaacctaattttaaagttgattttagttttcttattatagtcaatcttttgccgttaaaattttaaaccgctattaatagttttatttataaattatttttgttcgtttagtatatttttctatggcttaccaaccatagttcaaatgattagtggaatttagaacagaatggtacaaaatttttctaaattctccctttcagatatcgacgagtgcgctctgccagaagaatatccctgctacggtgaatgcacaaacaagccaggatcgttttcgtgcatgtgtccgggtgggacgcacggtgatgctatgaacgaaggaggatgtgaaccaacgagtacatagaaatttctcttcatttcataacttaaatttatccttgcaatcttctctgcaaatccttgcacaaacagggttcagaaatttgaccgtatcttctgctggcagctctccttgtggcgataggaggaaccatcggcataggaattccatccgtgttcgtgataggcatggcaatgacgaacatgatcaaggcacggagggccaagaaactgagagccgtattcttcaagcagaaccggggtttactgctgctgcaacttgttgataaggtgattgctgaaaggatggtgtttaccttggaagagctcgaaaaggcaacaaatcgattcgacgagatgagaaagctcggcagcggcggccatggcactgtctacaaaggcaccttgccagacagacgtgtcgttgccatcaagaaatcgaatattacggttcgtaaggagatcgatgatttcataaacgaagttgtcattctttcgcagatcaaccatcggaatgttgtgcggttattcggatgttgccttgaaacacaggttccactactggtctacgagttcatatcgaacggcactctttccgaccatctccatgttgaaggccctacattgttgtcatggaaaaatagattgaggattgctcttgaagctgcaagcgctttagcctacttacattcatccgcttcagtatcaataattcatagggatgttaagtctgctaacatattgcttgatggtcgcttaacagcaaaagtttcggactttggagcctctcgaggcattccggttgatcaaggtggtgtgacaacagtgatccaaggcacatttggatatcttgatcctgaatactatcaaacaagtagattgaccgataagagtgatgtgtacagttttggtgtcatactcgtggagatgctcacaaggaagaagcctactgtttttgaatcatcagataatgtcagcctaattgcactttttaatttgctaatggtacaggacaacatctacgagatattagaccctcaggtaatttcggagggcatggaaaatgtgaaagaagtcgcggcgctagcatcggcatgcctaagattgaagggggaagagaggccaacaatgaggcaagtggagataaggctggaaaggctgttaggcggtgacattttgcaagggctttcagctgagctgcactgtctaccacctcaactgagcaataccgacactactagcaagctatacaacatggagcgggattttttgctatcgtcgagcttcccacggtgatcttactacatgtgtacaaactacatacaactttaccacttaaagttgtttagcatgtgtttgatttgaagatgaggtgagatgtgttagatgaattgggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0482640, RefSeq:Os09g0482640