BGIOSGA021032

From RiceWiki
Revision as of 16:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021032

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021032, complete gene.

LocusTag

P0656E03.11

Ensembl Transcript ID

BGIOSGA021032-TA

Ensembl Protein ID

BGIOSGA021032-PA

Length

3907

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22323649..22327555

Sequence Coding Region

22327357..22327555,22326523..22326841,22325673..22326021,22325276..22325408,22325153..22325205
,22324889..22324991,22324285..22324451,22324099..22324212,22323649..22323819

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22323649..22327555 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22323649..22327555 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGGCCTTCGACGAGTTCGGCCGCCCCTTCATCATCCTGCGTGAGCAGGAGAAGAAGTCGCGGCTGCGCGGCCTCGACGCCCAGAAGGCCAACATCGCCGCCGGCAAGGCCGTCGCCCGCATCCTCCGCACCTCGCTCGGCCCCAAGGGCATGGACAAGATGCTCCAGTCCCCCGACGGCGACGTCACCATCACAAATGATGGCGCAACGATCCTGGAGCAAATGGATGTGGACAACCAAATCGCGAAGCTGATGGTGGAGCTGTCCTGCAGTCAAGACTACGAGATTGGGGATGGTACCACTGGTGTTGTGGTCATGGCTGGCTCTCTCCTGGAGCAAGCCGAGAAACTGCTGGAACGCGGCATTCACCCCATAAGGATCGCCGAAGGTTATGAGTTGGCCTCAAGGATAGCTTTTGATCACCTTGAGCACATCTCCCACAAGTTTGAGTTTAGTGCTACCAATATAGAGCCTCTGGTGCAGACCTGCATGACAACCCTGTCATCGAAAATTGTTAACCGTTGTAAGAGGACTCTTGCTGAGATTGCTGTGAAAGCGGTCCTTGCTGTGGCTGATTTGGAAAGGAAGGATGTAAACTTGGACTTGATCAAAGTGGAAGGTAAGGTAGGCGGGAAACTAGAGGATACTGAGCTAGTATATGGAATCATTGTCGACAAAGATATGAGCCACCCTCAAATGCCAAAGAGGATTGAGGATGCTAAGATTGCCATCCTGACCTGCCCATTTGAGCCCCCGAAGCCTAAGACAAAGCATAAGGTTGACATTGATACTGTAGAGAAGTTCCAGATGCTGCGTGAGCAAGAGCAAAAATACTTTGATGAAATGGTTCAGAAATGCAAGGATGTTGGAGCAACCCTAGTTATTTGCCAATGGGGCTTTGATGATGAAGCCAATCATCTGCTGATGCATAGAAATTTGCCAGCTGTCAGATGGGTTGGTGGTGTTGAATTAGAATTGATTGCCATTGCTACAGGAGGGCGGATTGTTCCGAGGTTCCAAGAGTTGAGTCCTGAAAAGCTTGGGAAGGCTGGAATAGTCAGAGAGAAATCATTTGGAACAACAAAAGATCGCATGCTTTACATTGAACAGTGTGCCAACTCCAGAGCTGTAACTATCTTCATACGTGGTGGCAACAAAATGATGATTGAGGAGACCAAGCGAAGTCTTCATGATGCTCTTTGTGTTGCAAGGAATCTTATCCGTAATAATTCAATTGTGTATGGTGGTGGTTCAGCAGAAATATCTTGCTCAGTTGCTGTTGAAGCTGCTGCAGATCGGTACCCAGGAGTTGAACAGTATGCAATCAGGTCATTTGCTGATGCGTTGGATGCTATTCCACTAGCCTTGGCCGAAAACAGTGGTTTGTCTCCTATTGATACACTGACAGCAGTAAAATCTCAACAAGTAAAGGAGAGCAATCCTCACTGTGGCATTGACTGCAACGATGTTGGGACAAACCACATGAAGGAACAAAATGTTTTTGAAACACTGATAGGCAAGCAGCAGCAGATCTTACTGGCAACCCAGGTGGTGAAGATGATTCTCAAGATCGATGATGTTATCTCGCCTTCTGACTATTGA</cdnaseq>

Protein Sequence

<aaseq>MALAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADALDAIPLALAENSGLSPIDTLTAVKSQQVKESNPHCGIDCNDVGTNHMKEQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY</aaseq>

Gene Sequence

<dnaseqindica>1..199#715..1033#1535..1883#2148..2280#2351..2403#2565..2667#3105..3271#3344..3457#3737..3907#ATGGCGCTGGCCTTCGACGAGTTCGGCCGCCCCTTCATCATCCTGCGTGAGCAGGAGAAGAAGTCGCGGCTGCGCGGCCTCGACGCCCAGAAGGCCAACATCGCCGCCGGCAAGGCCGTCGCCCGCATCCTCCGCACCTCGCTCGGCCCCAAGGGCATGGACAAGATGCTCCAGTCCCCCGACGGCGACGTCACCATCAGTAATCATATCCACCTCTCTCTCTCTCTCTCTCTTCTACTCTTCTAGGTTTTAAGGCTTTCTGCGCGCCTTCTCGGCTCTGTCTCGTCAGAGATCTGGGAGTGGGAGGCGGCTCGCTCGCCGATGGATCGGTTGGCCCCGGGGATGACGCAGAGCGATCTGTGGATTAGGGTTTTCGGTCGATGCAGAGATCATGAGATCTAGTTGTTTCCTGTGTGTTATATCGAATGGCGGAATTTTGTTTTTATATCGAACGTTGTAACTCAGATTTGTTTAGGGTCGGATCCGGTTTGCATTTTTGTTCTTTTTATTCTGCTAAAAATACCAGGCTGCCATTTTCTCTAGCTACCTATTGATCTCGGTCCAAGGGATTACTAGTGGTGACTGGTGTGTTAATTTGGATTTTGAGGGTCTAGGTTTATGCATTGATTTGGTTATGCAGTCGTGGATGCAAATTGTATCTAGATTCCAACATTTTCTGTTGCTTAATGAACATGTTACGTTATGAATTGTCAGCAAATGATGGCGCAACGATCCTGGAGCAAATGGATGTGGACAACCAAATCGCGAAGCTGATGGTGGAGCTGTCCTGCAGTCAAGACTACGAGATTGGGGATGGTACCACTGGTGTTGTGGTCATGGCTGGCTCTCTCCTGGAGCAAGCCGAGAAACTGCTGGAACGCGGCATTCACCCCATAAGGATCGCCGAAGGTTATGAGTTGGCCTCAAGGATAGCTTTTGATCACCTTGAGCACATCTCCCACAAGTTTGAGTTTAGTGCTACCAATATAGAGCCTCTGGTGCAGACCTGCATGACAACCCTGTCATCGAAAATGTAAGTCATAAGATAAATATAATTTTAGCTAGTCTTGAACTGTTCAGAAGGCCACACGATTTTCTTTTCTTGTTTCTTTTTCGAACTAAGTATATTGACCTTTTTTTCCAAGTAGTATGCTGTTGCAAAGAATTGTTATGCCTTTGCCACTTTTTTAGGTAGTGCAATGGTTTTCCTTGGATCTTTTCCCCTTTTTCTTCCCTAACTGCCTTGGCATAATAAGAGTAAAAGATTCCACTAATTCTCACACTGTCATTTGTAGTGCATCTATATTACTGCCACTTGAACTCATTTCCGTCTTCAAAGCAGATCTACTCCTAAGAAATATACTTGTCATAACAATACCAAACCTGTGGTTCCACTTCAAGCATGGAAGGTGTTTGTAGGAGACTTTTTGATCTGCCTCTAAATTTATATGCTAGAGCTTTAGAAGTATCTTTCTTAGGTCAGATTCACAGTGACTATAACAGCTTGTTGATCTTTCTTACTCTTATTCTGCAGTGTTAACCGTTGTAAGAGGACTCTTGCTGAGATTGCTGTGAAAGCGGTCCTTGCTGTGGCTGATTTGGAAAGGAAGGATGTAAACTTGGACTTGATCAAAGTGGAAGGTAAGGTAGGCGGGAAACTAGAGGATACTGAGCTAGTATATGGAATCATTGTCGACAAAGATATGAGCCACCCTCAAATGCCAAAGAGGATTGAGGATGCTAAGATTGCCATCCTGACCTGCCCATTTGAGCCCCCGAAGCCTAAGACAAAGCATAAGGTTGACATTGATACTGTAGAGAAGTTCCAGATGCTGCGTGAGCAAGAGCAAAAATACTTTGATGAAATGGTTCAGAAATGCAAGGTAGGATCATGGTTGCATATTTACATACATTATTCTCTACATTTTTCAATAGTTGTATTTTTTTTGTTTCCTTGGTTAATATTTCATGGTTGCACATTTATTTAATTGATCCTGATGTGACTTGTCAAGTTAACTCTCATCTTTTCCCTTCATATTTCCCTAAGTACCAAACTACCATAAAGTGAATGTATTGGGTTTCACTTTGCTCCATATCATGTTGTGTGTGTGCTTGCTAATTAATTACGTATATTTATAATTTTGTAGGATGTTGGAGCAACCCTAGTTATTTGCCAATGGGGCTTTGATGATGAAGCCAATCATCTGCTGATGCATAGAAATTTGCCAGCTGTCAGATGGGTTGGTGGTGTTGAATTAGAATTGATTGCCATTGCTACAGGTATCCATACCTCCATGAGAATTTGATTGACTTGTACATACAGTGCATAACATATAAACACTGACTGCAGGAGGGCGGATTGTTCCGAGGTTCCAAGAGTTGAGTCCTGAAAAGCTTGGGAAGGTAAACATACTCTCTCCACTGATGAGAATCAAGAAATATGTGTGTTTTTTTATCTTTGTTGGTGTGAAAAGTGTTTAAGTTATCCATTATGGGGATTCATGTTGGCACCATTCTGAACTTGTCTTATGATATTTTCTTTTGTGCTTACTTTTCCTATACAGGCTGGAATAGTCAGAGAGAAATCATTTGGAACAACAAAAGATCGCATGCTTTACATTGAACAGTGTGCCAACTCCAGAGCTGTAACTATCTTCATACGTGGTGGTATGTTATTTCAATTGCCAAAGGAGAGTGACTGATATAATTGAATATAGTAATTGTGCATTTAAAGCCTACATTACATTATACCATATGTGGTATCAAATACATATGCCACAAATATTTCATATGTTTAGGGCAATAAACTAAAATAGCAACTGGGTCTTACTAAAATACTATTTTTGACAGTACTTGTTTGCATACTTCATAGGTAGGAGTAGGTTTGTAAAATCGATATTAAATATCAACTGCATCATAATATCAACATCATCTGAGACAACTTTAGATAAAATTTAAAAAGGCAGCAAAGCAGTATGGATCACAATGCATGGTTGTGCTCAGCATCTACTTTTCAATCTCAATCAAGTAGAAAATCAATAATCTCTTCTTAAAAATAACCTTTGCTTGGAGCTTGTGCGATGATGAAACTATCTACTTTGCAGGCAACAAAATGATGATTGAGGAGACCAAGCGAAGTCTTCATGATGCTCTTTGTGTTGCAAGGAATCTTATCCGTAATAATTCAATTGTGTATGGTGGTGGTTCAGCAGAAATATCTTGCTCAGTTGCTGTTGAAGCTGCTGCAGATCGGTACCCAGGAGTTGAACAGGTAATTACTGGCGTGCGAGCTATACAAACACATCCTATATGTATCCTCTGATTCTATCTTTTTTATTTGCAGTATGCAATCAGGTCATTTGCTGATGCGTTGGATGCTATTCCACTAGCCTTGGCCGAAAACAGTGGTTTGTCTCCTATTGATACACTGACAGCAGTAAAATCTCAACAAGTAAAGGTATTTGTTTTCTGTGATACTTTTTTCCGTTGTTCTGTTTATTAGTACAGATGTGAGCTTAGTTCTTGACCATCTCATTTCTTGCCGATGCCATTGCGATGTTGATGGGCCAATTGCATACCAGTCTAAATAAAATGCACTAGTTTTGCATGGTCCTACAATACACTATACGTGCTTGATTCTATGCATGTTATATTATGATTCTGAGCTAGTTATAGTGTTTGTACTGTATTGATGCCATTTGTATCCTTAATAACATAACATTTCTGAAAACCTCAGGAGAGCAATCCTCACTGTGGCATTGACTGCAACGATGTTGGGACAAACCACATGAAGGAACAAAATGTTTTTGAAACACTGATAGGCAAGCAGCAGCAGATCTTACTGGCAACCCAGGTGGTGAAGATGATTCTCAAGATCGATGATGTTATCTCGCCTTCTGACTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021032