Os07g0677100

From RiceWiki
Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0677100| Description = Peroxidase| Version = NM_001067162.1 GI:115474056 GeneID:4344277| Length = 1887 bp| Definition = Oryza sativa Japon...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0677100

Description

Peroxidase

Version

NM_001067162.1 GI:115474056 GeneID:4344277

Length

1887 bp

Definition

Oryza sativa Japonica Group Os07g0677100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29329657..29331543

Sequence Coding Region

29329743..29329940,29330388..29330579,29330682..29330847,29330932..29331323

Expression

GEO Profiles:Os07g0677100

Genome Context

<gbrowseImage1> name=NC_008400:29329657..29331543 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29329657..29331543 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcttctctttcagtggccgtgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacgttctacgacacgtcgtgccccagggcgctggccaccatcaagagcgccgtgacggccgccgtgaacaacgagcctcgcatgggggcgtcactgctcaggctgcacttccatgactgctttgtccaagggtgcgatgcgtccgtactgctggcggacacggccacgttcaccggcgagcagaatgctcttcctaacaagaattctctcagaggcttcaacgtcgtcgacagcatcaagacgcagctcgagggcatctgcagccagaccgtctcctgcgccgacatcctcgccgtcgccgcccgcgactccgtcgtcgcactgggagggccgtcatggacggttggtctcgggaggagggactcaaccacggcgagcatggacagcgctaacaacgacctgcctcctcctttcttcgacctcgagaacctcatcaaggcgttcggcgacaagggtttcagtgtcaccgacatggttgctctctcaggtgcgcacacgatcgggcaggcgcagtgcaccaacttcaggggaaggatctacaacgagaccaacatcgacgccggctacgcggcgtcgctcagggccaactgcccgccgacggccggcaccggcgacagcaacctggcggcgctggacacgacgacgccctactccttcgacaacgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcaacagcacggacaacacggtcaggaacttcgcctccaacagggcggcgttcagcagcgccttctcgtcggccatggtgaagatggccaacctcggaccactcaccgggagccagggacagatcaggcttagctgctccaaagtgaactaa</cdnaseq>

Protein Sequence

<aaseq>MASSLSVAVLLCLAAAAAAQLSPTFYDTSCPRALATIKSAVTAA VNNEPRMGASLLRLHFHDCFVQGCDASVLLADTATFTGEQNALPNKNSLRGFNVVDSI KTQLEGICSQTVSCADILAVAARDSVVALGGPSWTVGLGRRDSTTASMDSANNDLPPP FFDLENLIKAFGDKGFSVTDMVALSGAHTIGQAQCTNFRGRIYNETNIDAGYAASLRA NCPPTAGTGDSNLAALDTTTPYSFDNAYYSNLLSNKGLLHSDQVLFNGNSTDNTVRNF ASNRAAFSSAFSSAMVKMANLGPLTGSQGQIRLSCSKVN</aaseq>

Gene Sequence

<dnaseqindica>87..284#732..923#1026..1191#1276..1667#attgcatcgcatcgcattgcatctgcaagagtagtagtagtggtgctctggtagtctactgctgcttgatcgatcgatcgatcgccatggcttcttctctttcagtggccgtgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacgttctacgacacgtcgtgccccagggcgctggccaccatcaagagcgccgtgacggccgccgtgaacaacgagcctcgcatgggggcgtcactgctcaggctgcacttccatgactgctttgtccaagcaagtccctgatctcatcgatctcatggctaactttagctgcagtaattaataaatctatgttcagttttcgttttgcgtctgattgcactgtgttcagaattagctaagttatgtgacactgtcaattcagttggactgacagaattactaacgtcaaaaggctagctttggactcgtcactgacactgatacgagattccatttccaagcttagctttgaccatctctagtttgactcaagtaaaaagagagagtaggagttgataacaattgactattagtactcgtaacaattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattttattttgcaactaggactgacaaagtagtagtaactgtcaatttatcaggggtgcgatgcgtccgtactgctggcggacacggccacgttcaccggcgagcagaatgctcttcctaacaagaattctctcagaggcttcaacgtcgtcgacagcatcaagacgcagctcgagggcatctgcagccagaccgtctcctgcgccgacatcctcgccgtcgccgcccgcgactccgtcgtcgcagtaagctagatcatcatcctcgccgccgcaccggccgcttgtgcgacatgaaactcacgacgattaattaaggaattaattaatttcttcttgtggttgcagctgggagggccgtcatggacggttggtctcgggaggagggactcaaccacggcgagcatggacagcgctaacaacgacctgcctcctcctttcttcgacctcgagaacctcatcaaggcgttcggcgacaagggtttcagtgtcaccgacatggttgctctctcaggtaaactgatcaatcgatcggtttctgaattttctgaagtcatagctcactctacatcgcgatatgacatgatggatgatgcaggtgcgcacacgatcgggcaggcgcagtgcaccaacttcaggggaaggatctacaacgagaccaacatcgacgccggctacgcggcgtcgctcagggccaactgcccgccgacggccggcaccggcgacagcaacctggcggcgctggacacgacgacgccctactccttcgacaacgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcaacagcacggacaacacggtcaggaacttcgcctccaacagggcggcgttcagcagcgccttctcgtcggccatggtgaagatggccaacctcggaccactcaccgggagccagggacagatcaggcttagctgctccaaagtgaactaataattaagtaaagaatcaaactggatacaaaagcaaacacaaatttgggaataaggctgggccatatatgtcacagtagtagtattttactagtctgaaatgtttgctaagagtgttttctctgatcagcacaaagtgtttgaaacagatcaggaagcccatgttatgtaccgatcagtatggttttgaagttatcaaggaatgcatgaatgataatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0677100, RefSeq:Os07g0677100