Os07g0679700

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Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0679700| Description = Transcriptional factor B3 family protein| Version = NM_001067177.1 GI:115474086 GeneID:4344293| Length = 6532 bp| D...")
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Gene Name

Os07g0679700

Description

Transcriptional factor B3 family protein

Version

NM_001067177.1 GI:115474086 GeneID:4344293

Length

6532 bp

Definition

Oryza sativa Japonica Group Os07g0679700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29446630..29453161

Sequence Coding Region

29446921..29447717,29448043..29448110,29448218..29448331,29448572..29448621,29448749..29449159
,29449271..29449347,29449820..29449994,29450580..29450676,29450852..29451570
,29451637..29451738,29451830..29451911,29452741..29452898

Expression

GEO Profiles:Os07g0679700

Genome Context

<gbrowseImage1> name=NC_008400:29446630..29453161 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29446630..29453161 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggatggctgcggcggcggcggcgttggtggcggcgaagaggtgcatgaacgccgcgtgcggggccccggccccgtccccggcgggaggggagtggaggaagggctggccgctgcgatccggtggcttcgccgtgctctgcgacaagtgcgggttggcatatgagcagcttgtgttttgtgatatatttcaccaaaaagaatctggctggagggactgctcattttgtgggaagcgtctccattgtggatgtattgcttcgaagaactcctttgatctacttgatagcggtggagttcaatgtgtcacttgcattaaaaattcagcagttcaatctgttccaagtccagtcgtccccaagcttttttcatcccaaaataaccagagactttttggcaaaagcgatgatttattgtctggtagaccactggagacatcctcccttatggtcgatgccagaaacgatgatcttactattatcgctaagaacaaccttccattcatggtgaaaaacgtagaagctgggcaaagcagtaatattttgaggcaaaaagaactagagaatggtgcgaggcagattaaatgggaactacctacccttagtatcggggacatgggaaggatacctttcctaactagatctcaaagtgcattggagtctcgaagagatgaaaataaagacccaactacagaaagcacgacaagtgaatcactttctgaggcatgcctcaacatgagcttgggaattgctagtaatggaaacaagttggaggctacttcaactgtggaaagacctatgctatcaccaacaacaggatttcctgaaggaagagagcttaccactgcattatctccatttcagcatgcacaaagggctcgtcattttctgaccagaccgccaagggttggtgaaggtgctgtttttgatccaacgaaagatatgcttccgcatcttcgtgttgcaaggccacctgcagaaggtaggggccgcaatcaattacttcctcgatattggcctagaataacagaccaagagctacagcaaatttctggagattcaaattccaccattgtccccctgtttgagaaggttctaagcgccagtgatgcaggccgcatagggcgccttgttctaccaaaagcctgtgcggaggcatatttccctccaatttctcagccagaaggtcgtcctttgacaattcaagacgcaaaaggcaaagaatggcattttcagttcagattctggccaaataacaacagcagaatgtatgtcttggagggggttacaccatgcatacaatcattacaattacaggctggtgatacagtgacttttagtcggatagaacctggagggaaacttgttatgggcttccggaaggccacaaacactgtcagtttgccagactcacagatttcagctattgccaacggttccattcttggggatacattattttctagtacaaatgagaatttagcaatagtaagtggttattcaggatttcttcagtcaataaagggggctgcagatctccatacaagctctatatacgatcatcatgtgaactcagctgacggggatgttagttggcttaagacagataaattcggcagcaggccagatgaggggtctttgcagtttttaaagagaggccgcaatattggttccaaaagcaggaggctttcaatggatgctgaagaagcctgggaactaaagctttactgggatgaggttcaggagctgttgcgtcctgctccaactgcaaaacctactgtcgtgatgattgaggactacgaaattgaagagtatgatgaaccccctgtgtttgcaaagagatcaatttttaccatccgttctactggggaacaagatcaatggattcaatgtgatgattgctcaaaatggcgccggttaccacttaatgttattgttgcatccaagtggacatgtgctgacaacacaatcgactcaaaaagctgttcctgctctgcacctgaagaattaacccccaaagaattgcacattgttcttcagcaatacgaagatatgaggaggcgaaggaacagctttggttttaagcagaacatccccgaaatggatgcggtcagccttgatgcctttgccactgccgcagtctatggtgatgtcgggaaccaaggttccccttctgttgcgacaaccacaaagcacccccggcatcgccctggctgcacctgcatagtgtgtatccagccacctagcgggaagggcccgaagcacaacccagcttgcacctgcaatgtctgcatgaccgttaggcgtcgcttcaagacactgatgatgaggaagaagcaacggcagtcggagcgagaggaggccgaggcgagcaagaagatcgcttggatgaacagagatgagcctgagggaagcagcctgtcaagatccccacagacggttgacactacccgagacggagatgtgaccatgttcgacaaggttgacatcaacaagggccacatagacctgaacttccaccctactgccgtccgagacgaggagcggcatggcgggcagcctcgggtgagcatggtcagcctcctggaggtggccaaccggccactggagaactacatgaagcagaacggcctgacgagcttggctggggagcaagggagctccagcacatgtacaggtgcagccacggttccgcagccggctctggtggagagcgaagagcggacgtccaacaacgacggcgggcgtgtggcgacggcagagcagccggagagcatggccgtcgacgaggctggagataaccagccggacaaggctgccggtgactctgctgctgctttagcttga</cdnaseq>

Protein Sequence

<aaseq>MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGG FAVLCDKCGLAYEQLVFCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQ CVTCIKNSAVQSVPSPVVPKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVDARNDDLT IIAKNNLPFMVKNVEAGQSSNILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQS ALESRRDENKDPTTESTTSESLSEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFP EGRELTTALSPFQHAQRARHFLTRPPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQ LLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPI SQPEGRPLTIQDAKGKEWHFQFRFWPNNNSRMYVLEGVTPCIQSLQLQAGDTVTFSRI EPGGKLVMGFRKATNTVSLPDSQISAIANGSILGDTLFSSTNENLAIVSGYSGFLQSI KGAADLHTSSIYDHHVNSADGDVSWLKTDKFGSRPDEGSLQFLKRGRNIGSKSRRLSM DAEEAWELKLYWDEVQELLRPAPTAKPTVVMIEDYEIEEYDEPPVFAKRSIFTIRSTG EQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDSKSCSCSAPEELTPKELHIVLQQ YEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVGNQGSPSVATTTKHPRHRPGC TCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKKQRQSEREEAEASKKIAWM NRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNFHPTAVRDEERHGGQPR VSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQPALVESEERTSNND GGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA</aaseq>

Gene Sequence

<dnaseqindica>5445..6241#5052..5119#4831..4944#4541..4590#4003..4413#3815..3891#3168..3342#2486..2582#1592..2310#1424..1525#1251..1332#264..421#agcaggagtaattcttcagtctcctcttcttgctccccccatctggttggttttccttttcttccccgcatccgcacccgagtcgccagcgatcgatcgttttggtttggtgccatctccacatccaccggaaaactacgcttcccctacccaccgcatcatcctcttgcctcgatctttactgctctctactaggctcgagctgtgtgggtggggtgatgcggtgagcttttctttttcttcttctattgatcggagtggccatggcggggatggctgcggcggcggcggcgttggtggcggcgaagaggtgcatgaacgccgcgtgcggggccccggccccgtccccggcgggaggggagtggaggaagggctggccgctgcgatccggtggcttcgccgtgctctgcgacaagtgcgggtacgcctccgcctcttcctctctcggttcctcctcctccgcgctagcttgctgtgcgcgcccatggtggtccacgcgccgcggctgaaatggctggctgcatgaattagctgctgtgctcttttttttttggttgtttcctgtatatcgtctcgatgatttcccctctttttctccctaaatttatttgtttttccaacggctacaacttgtgtttattacttgtttgatgtgatttttaccattaccatttgtggtgatctcgtattggcgcccaaattagttgatttatgaggaaactgtgccggggtagaagcaacagtgttgcgcgtgtagaatttttggaaagtggaaaatccggtgaaactttggaaggttgacttgatggctcgttgtgcgattagctagcagttaattgagtggacatcatgctcaactgggatttcgatgatcgttcagttacttgctgcacatgagcttctcacaattaaaattatatttgtggtgacttgtaactggattgctgtcccggatgacgtttcctgcgctttggtgtaaaaaggggggaatttgtttgccaaagctctatgagttgtcaaaattgctgcttggtaaaaaatagatgtattgtgaaattggtgtagttatgcaacctgatttttcttacaattgatttttggtgatggagaaaaacatatgcttagttgaacaacataaggttaaagagtgttttcttctgaaaaggaggttactttaatcccctataccaatttgaagtccaatttccttgatctatctattttgattatgccatttatgctttatgtaggttggcatatgagcagcttgtgttttgtgatatatttcaccaaaaagaatctggctggagggactgctcattttgtgggaaggtgagatggtgacctatgctgtgaaatgtatgcacatttttggtgctagattgttctgcaacagtaactctaaagaacttcactattccagcgtctccattgtggatgtattgcttcgaagaactcctttgatctacttgatagcggtggagttcaatgtgtcacttgcattaaaaattcagcagttcaatctgtaagtttgtttgttgcatatttgtatttcttttccaaattatctgattgttccttttttttgtaggttccaagtccagtcgtccccaagcttttttcatcccaaaataaccagagactttttggcaaaagcgatgatttattgtctggtagaccactggagacatcctcccttatggtcgatgccagaaacgatgatcttactattatcgctaagaacaaccttccattcatggtgaaaaacgtagaagctgggcaaagcagtaatattttgaggcaaaaagaactagagaatggtgcgaggcagattaaatgggaactacctacccttagtatcggggacatgggaaggatacctttcctaactagatctcaaagtgcattggagtctcgaagagatgaaaataaagacccaactacagaaagcacgacaagtgaatcactttctgaggcatgcctcaacatgagcttgggaattgctagtaatggaaacaagttggaggctacttcaactgtggaaagacctatgctatcaccaacaacaggatttcctgaaggaagagagcttaccactgcattatctccatttcagcatgcacaaagggctcgtcattttctgaccagaccgccaagggttggtgaaggtgctgtttttgatccaacgaaagatatgcttccgcatcttcgtgttgcaaggccacctgcagaaggtaggggccgcaatcaattacttcctcgatattggcctagaataacagaccaagagctacagcaaatttctggagagtatccttattatatttatcaacttcttggtgatattatgcataagtagctaacatactttgcgtataatacaatctctgtaactgatcaatcagggcgaattatttcatattgtgcatacctatttctgatctggatgctattttggttttccttaactatatttctcttcaagttcaaattccaccattgtccccctgtttgagaaggttctaagcgccagtgatgcaggccgcatagggcgccttgttctaccaaaagcctgtgcggaggtatttttttgttcacaaccttttgtggttctgcctcctgttaataaaattttagtgttgttacctcattactgatttatcgtttttgtatcatattccctattatttaaagatcctttgatacaaatgaggatcaggaacaccctcccatccacatgttacaaaaaacaataacctttattatgctttgacaagatctatgtgactatattatatagtagtatatgcacaagagttaggactagaaagaaatacagccgatgtggaacctaattttactacttcacgtaaacactgacatagaatacctgatcaacagagacctaggccattgttacacttgttagtattgttatgctacttgacattctttggttcccaacatgctcaataatcttatataaataatttatttaaatattttcatggttacagtattttgcaatagagcactgctactttacattctttgcaaaatggttgctaactactgggagtggggacaattgtttctcagcataactattttaacatatttcttttcatgtttgctgtcatcctgagttgccgagatacattttgtaggcatatttccctccaatttctcagccagaaggtcgtcctttgacaattcaagacgcaaaaggcaaagaatggcattttcagttcagattctggccaaataacaacagcagaatgtatgtcttggagggggttacaccatgcatacaatcattacaattacaggctggtgatacaggttaaatctccttggacatgatatcacctgttctttttttacaattttattactgatgcctgattacatataagcaatgattttcctattgcataccttcaaaggatctaacatagttcaaaagtacttcaaaactatttgggaaagcactcatggcagtaaagttgccagttgataggggaatctccttaagtattcacaaatgtctaaattgagtgtacagaatttgaaagaacaaattgacctacacatggaattgacagggacaaataggggtcctcccatagtcatttaattgtcacgtctaggtcaaaattcaatgcctgattaatatttcatggtcatatcttacttgttataggaattttgtgtggtaatatatttaaacatgctaagtagaattgttccatattaaatgtgatctcactgggaaggttttcatacttaatggtgattcttgttttcttttcagtgacttttagtcggatagaacctggagggaaacttgttatgggcttccggaaggccacaaacactgtcagtttgccagtaagttagattttcctaacattcttcctactaatttattttcctgcaaatgcttgtttcactttcctttttcccttcctttatcaatgtttttatgttacttctgtacaggactcacagatttcagctattgccaacggttccattcttggggatacattattttctagtacaaatgagaatttagcaatagtaagtggttattcaggatttcttcagtcaataaagggggctgcagatctccatacaagctctatatacgatcatcatgtgaactcagctgacggggatgttagttggcttaagacagataaattcggcagcaggccagatgaggggtctttgcagtttttaaagagaggccgcaatattggttccaaaagcaggaggctttcaatggatgctgaagaagcctgggaactaaagctttactgggatgaggttcaggagctgttgcgtcctgctccaactgcaaaacctactgtcgtgatgattgaggactacgaaattgaagagtatgatgtaagtttgctggccatttcattattcacgtttgtgggaaacatgaaattctgacttcttttttctcagccctcaggagaggccttggaatgattgaatttaatctaactatattatacatatgcaggaaccccctgtgtttgcaaagagatcaatttttaccatccgttctactgggtaagaaccttattcagaagataccgtttagtactctagttttcatcatgaggaaaaccataagtggtggaaataaaacaacaaaaatattaagcgattgtttagatttcaatagatattgccttggagctgtatggtattgatatcattttaaagggtttgccctctgcatagacaccatacaaatattctctgtgccagtgactaatttttgccaataccttactgtgtattttttagggaacaagatcaatggattcaatgtgatgattgctcaaaatggcgccggttaccacttaatgttattgttgcatccaagtggacatgtgctgacaacacaatcgactcaaaaaggtatgctgtttgtggaaaaacattctagccacactttcgtcatttgatagaactgttcattgtacatcatgattagctaactaaaattatttccaacatatttgcagctgttcctgctctgcacctgaagaattaacccccaaagaattgcacattgttcttcagcaatacgaaggtatccatgcttttcatatgcacgccttgatagcaagatgctctgggcatgccataatggacatttggaggctctgactttatttaaaaggaatttcgtgcatttcaggacatgttacatcattctaggaaaaaagaacctgcatatagcatatagcatgatagtgggcaaataaaacatggatagtctggtataataggcatctcttatcacaattgaaattgataacaagtatatagggactgggtagcacatactgcatcatttctggtgacaaacttgtaaaaaaaaaaaagaaaaatcaataacttgaatattaccacagatatgaggaggcgaaggaacagctttggttttaagcagaacatccccgaaatggatgcggtcagccttgatgcctttgccactgccgcagtctatggtgatgtcgggaaccaaggttccccttctgttgcgacaaccacaaagcacccccggcatcgccctggctgcacctgcatagtgtgtatccagccacctagcgggaagggcccgaagcacaacccagcttgcacctgcaatgtctgcatgaccgttaggcgtcgcttcaagacactgatgatgaggaagaagcaacggcagtcggagcgagaggaggccgaggcgagcaagaagatcgcttggatgaacagagatgagcctgagggaagcagcctgtcaagatccccacagacggttgacactacccgagacggagatgtgaccatgttcgacaaggttgacatcaacaagggccacatagacctgaacttccaccctactgccgtccgagacgaggagcggcatggcgggcagcctcgggtgagcatggtcagcctcctggaggtggccaaccggccactggagaactacatgaagcagaacggcctgacgagcttggctggggagcaagggagctccagcacatgtacaggtgcagccacggttccgcagccggctctggtggagagcgaagagcggacgtccaacaacgacggcgggcgtgtggcgacggcagagcagccggagagcatggccgtcgacgaggctggagataaccagccggacaaggctgccggtgactctgctgctgctttagcttgagcttgaggctgaccgtgttgagtgtgtggatggcaggatgggtattgaatttgttgtgtgtgcatcttatcggcttccccctttttttacaggaacagcagctggtgagttttgatgttgagaatctcatagggtttcattgtgttcttgtagtccttcacttgctttcttgtgtaaacacacgtgtagaaggctgtatgatactgactgtaccttgtaatttttaaccacgaggctcaccttatttgctcatacctcggtgggcagctagttgttgtatgtatccaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0679700, RefSeq:Os07g0679700