Os07g0680400

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Revision as of 08:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0680400| Description = DNA-binding WRKY domain containing protein| Version = NM_001067180.1 GI:115474092 GeneID:4344296| Length = 3113 bp| ...")
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Gene Name

Os07g0680400

Description

DNA-binding WRKY domain containing protein

Version

NM_001067180.1 GI:115474092 GeneID:4344296

Length

3113 bp

Definition

Oryza sativa Japonica Group Os07g0680400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29488957..29492069

Sequence Coding Region

29489262..29489835,29490323..29490430,29490866..29491185

Expression

GEO Profiles:Os07g0680400

Genome Context

<gbrowseImage1> name=NC_008400:29488957..29492069 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29488957..29492069 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctcctgatggtggcgttggagacggcggcgcggagccacatgaagttatggacgacctgctcgagatgcgcgagcaagcggcgatgctccacagcatgctacatgggacatcgccgtcgagctgtgcggcggcggcgagcaccaggcagctgaatcagctgatagacggggtgatgagcaggctgcagtccagctcgctgtcggtgatgtcgcctggaggaggaggaggaagaagaggatcgggcgggaggaagaagaaaggcgccaaggccgtggccgggccgcacaggcggagcagctccggtagaagaagatcgaaaagtccttttgtcaggatggtcacgaccaaggagctggaggacggcaggcaatggcgaaagtacgggcagaaacatatacaggactccccaaataatccaaggagctactacaggtgcacgcataggccagaccaaggttgtatggccacaaagcaagtacagacctccgagtctaactcgtcggagttcgtcatcagctactacggtgagcacacctgcagcgacccttccaccatcccgttcgtcgtcgaggccgaagctcccgctgcagactacgcgaacctcatcagcttcggatccagcggcggcgcgagcacaagcagagtcgaccctcttcgtcagagccgccatcgtttgatggcagaagccgttgatccgacgccgtcctgcagcttcgccaactgccactctccggtactgtcctcggagtgcgccagcgaggcggcggcgctcagcagcagcctgccgctctccgccgtggtgggatcggcggtgacaacgccgtcgacgtcgatcgtgggttcagcgcctgcggattacgactggccgtcagggctcgccggaggtgacatggccggcagcttcccgtcctctcccagcagcctcgggttcatgactggctcctttgggaatcttcctggggatgacgacgacatgtttggcttcgatccttaa</cdnaseq>

Protein Sequence

<aaseq>MASPDGGVGDGGAEPHEVMDDLLEMREQAAMLHSMLHGTSPSSC AAAASTRQLNQLIDGVMSRLQSSSLSVMSPGGGGGRRGSGGRKKKGAKAVAGPHRRSS SGRRRSKSPFVRMVTTKELEDGRQWRKYGQKHIQDSPNNPRSYYRCTHRPDQGCMATK QVQTSESNSSEFVISYYGEHTCSDPSTIPFVVEAEAPAADYANLISFGSSGGASTSRV DPLRQSRHRLMAEAVDPTPSCSFANCHSPVLSSECASEAAALSSSLPLSAVVGSAVTT PSTSIVGSAPADYDWPSGLAGGDMAGSFPSSPSSLGFMTGSFGNLPGDDDDMFGFDP</aaseq>

Gene Sequence

<dnaseqindica>2235..2808#1640..1747#885..1204#tatattgcttatccctcaacgtcctgtaccggatgtgtgatgacttgtatgcatgaccagtgaaggagcaaaggtaacacgtgtatatcttctacttgtccttcagttagcttgcactgcatgctaagtgaaaacttctaatattcaagtgccaacatgccacttagaaaatgtatgagtgacaactatacatcaactaataacagctgtagtgctagcatcatcactaggcaagtagtagtgaaaaattgtctgccatcagatctacaagaagataggcatctaacgcatgcaatggcttgaaattaaacaactgctgcacttgcaatataactatgcattccatataccatatataaatgaaaagaaccaagcatgaatttctccaccacagttgggagctagctaggaccattccacattttcccagtgattaaacaatcatcttaattatatacgatttccagtactgccattttttttctcaggggttcactagcaccagccgggccgtgcatggagcatgaaccgaccgtccatgagctcacggcctcgtcacggcgatgacgtacaggcgacacacatccagctgggcccctccttccatgttccaagccatttcctttggtgagttgttcttcctcttccccccctcccgatcgccctcgtcgtctacttttcctctcaacttcccaccgagcacaccaataaaaactgcagctgctgcccaataacctatctactctagcagtctagctacggctgatgagcaggtgtcaatacaagagtagcaaagctgagaatatctagttcctactttgctagctttcctagtaatactagactgctagcagcagcaattagctatagtagcggctcctcccatggcgtctcctgatggtggcgttggagacggcggcgcggagccacatgaagttatggacgacctgctcgagatgcgcgagcaagcggcgatgctccacagcatgctacatgggacatcgccgtcgagctgtgcggcggcggcgagcaccaggcagctgaatcagctgatagacggggtgatgagcaggctgcagtccagctcgctgtcggtgatgtcgcctggaggaggaggaggaagaagaggatcgggcgggaggaagaagaaaggcgccaaggccgtggccgggccgcacaggcggagcagctccggtagaagaaggtgaagaaagttaaaacccttttttctcaataatcatctgcaactggatgcgcaactagctagctatgcttaccacatgcggtagtaatactattacccatatatatgatagcgattcacacatcatgctagctacctcctttatgcaacttggagagtacgttgggagtatattgccttgtctagcagtggggtttaatcttaactttacgtgccaatgatcaggggggaatttttactaccagtagctttcttctctcacaaaagatcatttcctgtttcttatattgaaaagaccaaaagctatgagcaactagctatatatatgacactcttgtatacgtacataccgtggtctgccgagcatgctagtggagatttgggtgtgtgtctctggatatgatagttgctcctatctgctgtaacatgtggcagatcgaaaagtccttttgtcaggatggtcacgaccaaggagctggaggacggcaggcaatggcgaaagtacgggcagaaacatatacaggactccccaaataatccaaggtatgtacgtatagattattcaactaattctgcagtaacatgaccagattcttcgcccttgtgcatggtagttagctagtacgtaatgatgattaacccagcaagaaattaaaggcccttgtaccggccgatcgaacacttgccaatgcaactggacaactcgcttagctactccagttaattggagaatagtgttccgatcttccggttccggccggatcatggttagcttcacatagttagatatatactactccaatacacatgtgcttaattcaattgaactgtattagttagttgttgcaattactaaaaagagtaggaaaatactgctcaacttgaactgtgtatttattattagatagcaacatagcatagttagcaccaaatcgttgctgtaacatgttatctattcaggagcatcatacgatgcaattttgcagcttgcattccttaattaaagatctagttgttgatctctctgcaggagctactacaggtgcacgcataggccagaccaaggttgtatggccacaaagcaagtacagacctccgagtctaactcgtcggagttcgtcatcagctactacggtgagcacacctgcagcgacccttccaccatcccgttcgtcgtcgaggccgaagctcccgctgcagactacgcgaacctcatcagcttcggatccagcggcggcgcgagcacaagcagagtcgaccctcttcgtcagagccgccatcgtttgatggcagaagccgttgatccgacgccgtcctgcagcttcgccaactgccactctccggtactgtcctcggagtgcgccagcgaggcggcggcgctcagcagcagcctgccgctctccgccgtggtgggatcggcggtgacaacgccgtcgacgtcgatcgtgggttcagcgcctgcggattacgactggccgtcagggctcgccggaggtgacatggccggcagcttcccgtcctctcccagcagcctcgggttcatgactggctcctttgggaatcttcctggggatgacgacgacatgtttggcttcgatccttaacaagggctgtgcatgcatacattcttgccatgctaattattgctactactaatattcaagaaaaacaagtccgctatttgcatgcagaagtgtatgcatgcatgcataatactattgctgtgaggctatagcaaattagcaatacttgtagtacatgtgtgtactgctattggaggaaatccaatatatatacggtacgtagtaaatatgtgtattagttgatcgctgtactagtgagttgtgtgtatgtgattttgtaagtattgaaacataatttgaaattaatatatagtagtgaaagtaat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0680400, RefSeq:Os07g0680400