Os07g0681400

From RiceWiki
Revision as of 08:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0681400| Description = Similar to Calcium-binding protein CAST| Version = NM_001067188.1 GI:115474108 GeneID:4344304| Length = 2791 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0681400

Description

Similar to Calcium-binding protein CAST

Version

NM_001067188.1 GI:115474108 GeneID:4344304

Length

2791 bp

Definition

Oryza sativa Japonica Group Os07g0681400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29549399..29552189

Sequence Coding Region

29549451..29550044

Expression

GEO Profiles:Os07g0681400

Genome Context

<gbrowseImage1> name=NC_008400:29549399..29552189 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29549399..29552189 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggcgagcagcagcagcagcagcagcagagcgtcgcggcggtgaggccgtcgctggggaaggcgccgtcgccgtcgttccggctccggaacggcagcctcaacgcggtgcgcctccgcagggtgttcgacctgttcgaccgcaacggcgacggcgagatcaccgtggacgagctggcgcaggcgctggacgcgctcggcctcgaggccgaccgcgccggcctggccgccaccgtcggcgcccacgtccccgacggcgcggcggggctccggttcgaggacttcgagtccctccaccgcgccctcggcgacgcgctcttcggctcgctggacgtccccgaggacggcggcggcggcggcggcggcgacgaggagatgaaggaggcgttcaaggtgttcgacgtggatggcgacgggttcatctccgcctccgagctgcaggaggtgctgaagaagctcgggatgccggaggccggcagcctggccaacgtgcgggagatgatctgcaacgtcgaccgcgacagcgacggccgcgtcgacttcggcgagttcaagtgcatgatgcaggggatcaccgtctttggcgcctga</cdnaseq>

Protein Sequence

<aaseq>MEGEQQQQQQQSVAAVRPSLGKAPSPSFRLRNGSLNAVRLRRVF DLFDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLHRA LGDALFGSLDVPEDGGGGGGGDEEMKEAFKVFDVDGDGFISASELQEVLKKLGMPEAG SLANVREMICNVDRDSDGRVDFGEFKCMMQGITVFGA</aaseq>

Gene Sequence

<dnaseqindica>53..646#gacgcgcatcttccgaaatagagaaattgccacggatcgagggcgaccgataatggaaggcgagcagcagcagcagcagcagcagagcgtcgcggcggtgaggccgtcgctggggaaggcgccgtcgccgtcgttccggctccggaacggcagcctcaacgcggtgcgcctccgcagggtgttcgacctgttcgaccgcaacggcgacggcgagatcaccgtggacgagctggcgcaggcgctggacgcgctcggcctcgaggccgaccgcgccggcctggccgccaccgtcggcgcccacgtccccgacggcgcggcggggctccggttcgaggacttcgagtccctccaccgcgccctcggcgacgcgctcttcggctcgctggacgtccccgaggacggcggcggcggcggcggcggcgacgaggagatgaaggaggcgttcaaggtgttcgacgtggatggcgacgggttcatctccgcctccgagctgcaggaggtgctgaagaagctcgggatgccggaggccggcagcctggccaacgtgcgggagatgatctgcaacgtcgaccgcgacagcgacggccgcgtcgacttcggcgagttcaagtgcatgatgcaggggatcaccgtctttggcgcctgaccacttcttccatccagggtagccatggcatccgctcaccctcacctagtaagtttcctcactgaagaagtccctccaaacattttttcaagtagaaattatgaacgtgttagggattgaatacggaacatcggggttgaaaccacacgccctttacgactacactaataagtttcctcactagtttttgatgaagataaaagcttccattgaattttcaagtcaagttcaattcacaccgatttgctagtatgaaattcaacatttttcactgtgtactgcaggcttctgaagttctgaaaacaaagacgtaagagaaggcactagccaatactagatcgcagccaagatcagtaggttcggtgtaatctttttaagcttaaggcaaggcaattccacttttgttgcagctacgaccttatccctgttagtgcctgttttgtgcatcggaatgcagtgcagggcctgagtttcgttttctgtggccttcattcgcacaacttgttgtgtggtgaggtggtgttgatattatacatctacatggacgtacgcttgctaatctagcgaatagtgatgtggatgttcttgaccctagctatctctaactttcacgtcaaccttaaaaattcggtgtttggtttttatcttccctttcaatagcaatccttatgtttcatttagattattgggtggattatattgctgtggtttatcaacttgatagataggtaaactaaataattcaagaaataaaattatcaaatagctgaatacaagctgtccaagtaatagagtagaagaaaattttgttgagacaacatatattttgaagcgtaaagcaaattatctgtttcaatatttgggcgaaaaaagttgaaaataacatggtcactttcacgcttgcattgcatggaaatggaggcacccaaattgctcggtaacttgttttcctggaggatattactactccatgttaggaccctgattgaaagtgaaacacaaaaattttacagttgttattttgtagaatataaggagccatgcaggtccccaaaatgcttggcaacttgtttatctgtcttttttttattaaaaaaaggtcgttacttcatttacattcctgattgaaacacaaaaaaaattgctgcagtaaatttgtaggaatacaaaaggtaccacagcatagcatattagcacatcacactagtactagctagtagcgccagtgtgcccacaggccgtatatacggcccagttcggcgtgagacttgctgggctgtggcgaaaggctgagtgacaccaatattgggcctcagtagatatcaaaaggaataagtctgtttgtctccctcttgtctttctgtttattgaatcgtctcactcaaccgtaaaattgggtataacacttctctcgtctttcaaaactggtgcacaacataataaacttatttggttttactgttgagagaggtgatttaatcgggagcaagagatgagggagggccattaaattattccataacaaaaggccttccagtcgcgcactagcccaacacaattgtgaaaaatggatgagacagatgggctgttagccacaggccggtatcagaaaatccaatggcccatggacgagctaccagtttgttacggcctactaccgtaagagcatgtataatagcagcctataagctagctataaatatatattttaaatagataaatgaatagagataagagcagtacggactccaatacgtaatgtgtgtatgacaggtatgatcagatattaatactatagtaaacaactattgtatgaattgtatattatattagctatagataatttgcagctattaattggctatactattaaacttgtcgtaagtgtcaatgtgtcatactgtcatgtcagtactgaatcactgctagtagtacactttataatagtgtgtcattgacgaagtttgtttgttttttttttacaaaaggtcaacgttcttatcggcggggttacaaggaaggacaacgtgttaatcatccattagcagctggtctttgcatcgtgtgatgaccatcatttctcattgaacgagtgaccaactcgatgattctgtcagtcccagtgagcgtgattgttttggttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0681400, RefSeq:Os07g0681400