Os07g0681500

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Revision as of 08:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0681500| Description = Ankyrin repeat containing protein| Version = NM_001067189.1 GI:115474110 GeneID:4344305| Length = 7863 bp| Definiti...")
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Gene Name

Os07g0681500

Description

Ankyrin repeat containing protein

Version

NM_001067189.1 GI:115474110 GeneID:4344305

Length

7863 bp

Definition

Oryza sativa Japonica Group Os07g0681500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29553259..29561121

Sequence Coding Region

29553365..29553645,29553747..29553860,29554153..29554506,29554689..29555005,29555233..29555324
,29555437..29555764,29556065..29556272,29557292..29557406,29557760..29557927
,29558541..29559213,29559289..29559495,29559648..29560738

Expression

GEO Profiles:Os07g0681500

Genome Context

<gbrowseImage1> name=NC_008400:29553259..29561121 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29553259..29561121 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcccgccgggggcgggggaggggagctggagaggagggtgatggcggcgctgaaggcgtcggaggcgcgtggggaccagccgctggtgtgggcggtggaggtggcccgcgtcgtcgccggggagggggcggggctccccagcgcggacctcgccgggatcctcgtctccaacctctgcttcgcgcacaactccccctcgctgtggaagctcgtcggccacgccgtggcctcccgcctcctctgcccgctccacgtcctcgcgctcctcaccccgagggtgctgccgcagcggcgggcgcagcctgaggcgtaccggctctacctggagttgctgagaagtaacgtcacatcctcctttctctccatggaggccgggcctaatcgagacaagataacaaagtccatcgatgatgctttgcaactgtcaaagatttatggattttctggaatcgacaatggacatgtcatcattttctttatgatgtttgtaatcaccaaactgatcgattgcacacttgaagactgtggctttccatccgggctgacagaggagcaggggagcatttacgctattgaagggccacaggatatggacttagatgtcaaaggggtttcaactgagaagcaaaacgagcaccgtgcacaactacgccggaagaacactgttatggctttagatgtgttgattatgatggttgctgataggaagatccaatcatttctgcgcttgatattcctgaacatgcctgaaaagttcagtgtgttaagccagaggttgagcttggttgaagctcacaaaatggaattggagacactattgactgctaatcataaaattgatgatctgttgatgaatatgtggagggttagcaatacagcctatcaaccaaacaacaaaaggcttttgggtgttcttggtaacatgaaatatggtggctccatgctgggccagtttactggagctgggagagctgcatgctgggttatatttgacatatatgttgagaatgcaattgatggaaaacatctaagcgccatatctgctatcgaggttctgaaagaaatgaccaagacactccaagcaattaatgaggcgagttggcaggaaacctttaaagctctttggatttctgcccttcgccttgtacagcgggctagagaacctctcgaaggaccaattcctcatctagattcaagactatgcatgctattagctcttattccattatcaattggtgcaattcttaaagaagaaactgatgtccatggagctcaaggaagcaaaagtcttccaaaaacatcaggacttgtatcatcactccaggatttgatccagtattcaggacttctagtacctccttcatcagtggtaaatgcagccaatgctgcagcctcaaaagcagcagcatttaaggccaactataagtctggaggtggcaaccctggcatgatgggccaaaatgactcttcgacaaaaactgttgggaatatgctacatcttatagttgaagcctgtatttcaaggaatttgattgatacatcttcttacttatggcccggctatgttgtatcatctgggcatttgaaagatgcgacattaccccaagaatccccctggttaaactttatgcaaggagcaccactttcaggtccacttattgatgctctgattgctactcctgcttcaagcaccacagaattggataggttatatcacatagcattaaatggttcagaggaggaaaaatcagctgctgcaaaaattctttgtggtgcatcatttgtttgtggttggaatatccaggaatatgtggtccgcatggtggtcaagctattatcacctccattgccctcaaattcctcaacacagggcagcatgagccactaccttgctcagatgtctacattaaatgcactcttgcttggtatttcttatggtgatgctatccacattatttctttgtatggaatggttccagatgttgctgcagctttaatgccaatctgtgaagtttttgggtccataccacctccatctaaccacaagcctgccattgttggtgaaatatcagtttattcggtcttctcttgtgcatttctttgtcttcttcgactgtggaaattttataaacccccacaagaatactgtctagctggacgtggaggctcagttagattggagcttactctggactacctgctgttaatgcgcaataaccatattgactttgcaaattcatctgccagtagtagaaactctagcaacaacataggtccattaaatgaggttcctgctcaaccactttatattgattctttccccaagttaagggcttggtattttcagaatcaagcttgcatagcttcaaccctttctggtctttgcaacaaaaatcctgttcatcaagttgcaaacaagattttgagtatgatttgcagaaaaatgaacaaacctgttgtatcatctggcaatctttcatccacttctagcagtagtgtcagtggttcctctgtaagtacaccagatgattaccaaaggccaacagttcctgcatgggaatttttagaagctgttccttttgttcttgaagctgttcttacagcatgtgctcatggacggttttccagccgagacttgactacaagtttgagagatcttgtggacttcttgccagcttctattgcagcaattgttagctacttcttagcagaaattacacgaggaatctggaaaatggtcccgatgaatggaactgaatggcctagtcctggtgcttctcttcattccatcgaagcagaaataaaggaaattctcgcatctgctggcattcagattcccagctgctatccacgtggtgtaccaccaatgcttcctttaccaatggctgcgctggtcagcttaacaattacatttaagcttgataagagttcagagtatatccatgcgatcagtggccaggcactagagaactgcgcagggggcagttcctggccaagtatgcccatcatagcagccttatggacacagaaagtcagaagatggcatgactttatcatcctctcttgtctgcgttctccattcggcagagataaagatgcagttgcacagctcatccaaagttgcttctcatcctttctacggtcctcgtgcagtgggtctgactttactgcaaaccgtggagttggtgccttaatgggagatgcaatcaccggccaaggtcttcagcttcccatggctcctggtttcatttacctgagaacttgtcgaacattccatgacacctactttgtgagtgaggtaatcctgaagcaagtcattgagtgggctgacaaacttgcaaatggattctcttccagtggccctccacagttaaaatcaggacgcacgccactatccagcgctgcatgtatggcgcatcaagttgcgatgcttggtgggggactcctgtgtgttgcaggtggacctcttctggtccaggtattgtatgaggagaccttgcctacgctgctgctatcagctcgagaagagagtatgaaagaccctggaccagtttcaagcacactccaaggttacgccatggccaacatgctcttcttctgtggtagtctgctctggggagcggaaagaacttctcctgtcatgaaattgtctttcctgtcaagaaggccacgagtggtgggaaaccatatggatttcatggcgggtgtattggatgggcacattcttctgggttgtgaccatggcacctggaaggcatatgtatcgcgctttgtgttcctggtggtgaagtttgtcccgtcatggttgcgggacattaaactggacacgctaaagaagatagcgtctgggcttcggagttggaatgagcacgatcttgcattggctttacttgagcgaggaggacctcaggcaatctccactgtagtcgacaccttgttgtga</cdnaseq>

Protein Sequence

<aaseq>MVPAGGGGGELERRVMAALKASEARGDQPLVWAVEVARVVAGEG AGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPLHVLALLTPRVLPQRRAQ PEAYRLYLELLRSNVTSSFLSMEAGPNRDKITKSIDDALQLSKIYGFSGIDNGHVIIF FMMFVITKLIDCTLEDCGFPSGLTEEQGSIYAIEGPQDMDLDVKGVSTEKQNEHRAQL RRKNTVMALDVLIMMVADRKIQSFLRLIFLNMPEKFSVLSQRLSLVEAHKMELETLLT ANHKIDDLLMNMWRVSNTAYQPNNKRLLGVLGNMKYGGSMLGQFTGAGRAACWVIFDI YVENAIDGKHLSAISAIEVLKEMTKTLQAINEASWQETFKALWISALRLVQRAREPLE GPIPHLDSRLCMLLALIPLSIGAILKEETDVHGAQGSKSLPKTSGLVSSLQDLIQYSG LLVPPSSVVNAANAAASKAAAFKANYKSGGGNPGMMGQNDSSTKTVGNMLHLIVEACI SRNLIDTSSYLWPGYVVSSGHLKDATLPQESPWLNFMQGAPLSGPLIDALIATPASST TELDRLYHIALNGSEEEKSAAAKILCGASFVCGWNIQEYVVRMVVKLLSPPLPSNSST QGSMSHYLAQMSTLNALLLGISYGDAIHIISLYGMVPDVAAALMPICEVFGSIPPPSN HKPAIVGEISVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLLLMRN NHIDFANSSASSRNSSNNIGPLNEVPAQPLYIDSFPKLRAWYFQNQACIASTLSGLCN KNPVHQVANKILSMICRKMNKPVVSSGNLSSTSSSSVSGSSVSTPDDYQRPTVPAWEF LEAVPFVLEAVLTACAHGRFSSRDLTTSLRDLVDFLPASIAAIVSYFLAEITRGIWKM VPMNGTEWPSPGASLHSIEAEIKEILASAGIQIPSCYPRGVPPMLPLPMAALVSLTIT FKLDKSSEYIHAISGQALENCAGGSSWPSMPIIAALWTQKVRRWHDFIILSCLRSPFG RDKDAVAQLIQSCFSSFLRSSCSGSDFTANRGVGALMGDAITGQGLQLPMAPGFIYLR TCRTFHDTYFVSEVILKQVIEWADKLANGFSSSGPPQLKSGRTPLSSAACMAHQVAML GGGLLCVAGGPLLVQVLYEETLPTLLLSAREESMKDPGPVSSTLQGYAMANMLFFCGS LLWGAERTSPVMKLSFLSRRPRVVGNHMDFMAGVLDGHILLGCDHGTWKAYVSRFVFL VVKFVPSWLRDIKLDTLKKIASGLRSWNEHDLALALLERGGPQAISTVVDTLL</aaseq>

Gene Sequence

<dnaseqindica>107..387#489..602#895..1248#1431..1747#1975..2066#2179..2506#2807..3014#4034..4148#4502..4669#5283..5955#6031..6237#6390..7480#ctcgagaggggcggtccatccacgtgaggaggacacagttgcaaatttccaaatccaaaccctcgtcggcgtcgtcaccgtggcggcgacggcggcggcggcggcgatggtgcccgccgggggcgggggaggggagctggagaggagggtgatggcggcgctgaaggcgtcggaggcgcgtggggaccagccgctggtgtgggcggtggaggtggcccgcgtcgtcgccggggagggggcggggctccccagcgcggacctcgccgggatcctcgtctccaacctctgcttcgcgcacaactccccctcgctgtggaagctcgtcggccacgccgtggcctcccgcctcctctgcccgctccacgtcctcgcgctcctcaccccgaggtcggcgggggtccccttttcccagttcgttcgtggcgcggattcggtgatcttcccaagcattttgtgagtgactccttggcgatggtgggtttttgcagggtgctgccgcagcggcgggcgcagcctgaggcgtaccggctctacctggagttgctgagaagtaacgtcacatcctcctttctctccatggaggccgggcctaatcgagacaagtaagagttctgctttggaatgtgacatcggaaagtgtgcggtcatgaactttctcaagggcacagcacaatcagtagctatgattgaattttgaactggctcgaaatcacgaaatctcatgatttttgatcggttttcaacaaaattgtaaaccctgcaccgccaaattcaaagtaggggtatactgcaattgcctgtacttctgtagtatgaacaacagagcagaacgtactagtcgcttgtatcctgctggatgttgctaaaatggaattgctgtttttttttcctcaggataacaaagtccatcgatgatgctttgcaactgtcaaagatttatggattttctggaatcgacaatggacatgtcatcattttctttatgatgtttgtaatcaccaaactgatcgattgcacacttgaagactgtggctttccatccgggctgacagaggagcaggggagcatttacgctattgaagggccacaggatatggacttagatgtcaaaggggtttcaactgagaagcaaaacgagcaccgtgcacaactacgccggaagaacactgttatggctttagatgtgttgattatgatggttgctgataggaagatccaatcatttctgcgcttgatattcctgaacatgtaagtcatgctcagttagaggaaattgctatccaaatatccaattctaagttttttttttattgattcatatcatcgcaaatttcctaagaacctttaaagaatacaccttttctcctgacatactttgtgcgtgacgcacattacaaatgcctgctaatgagacagtttttctaggttaggcctgaaaagttcagtgtgttaagccagaggttgagcttggttgaagctcacaaaatggaattggagacactattgactgctaatcataaaattgatgatctgttgatgaatatgtggagggttagcaatacagcctatcaaccaaacaacaaaaggcttttgggtgttcttggtaacatgaaatatggtggctccatgctgggccagtttactggagctgggagagctgcatgctgggttatatttgacatatatgttgagaatgcaattgatggaaaacatctaagcgccatatctgctatcgaggttctgaaaggtgtgcatacacaatccgattaattgacataaattttgcctttgtttttctgtattcattctttaaaatggctgcaatacattgaactatctgtgtgccgtgagttcatcttaaatgttggctagcaatgtcgatgaacatggtttttgtaaccaacaccgccttactgtcaattctttatgagataacatgtttttattgactaatatcatgttgctcttaatcagaaatgaccaagacactccaagcaattaatgaggcgagttggcaggaaacctttaaagctctttggatttctgcccttcgccttgtacagcgggtaaatagaccttttctgtattggctattattgttgaatacacacacacacacacacacacacacacacacacacacttctattgtgtctcacatgtaaatgttctaaataggctagagaacctctcgaaggaccaattcctcatctagattcaagactatgcatgctattagctcttattccattatcaattggtgcaattcttaaagaagaaactgatgtccatggagctcaaggaagcaaaagtcttccaaaaacatcaggacttgtatcatcactccaggatttgatccagtattcaggacttctagtacctccttcatcagtggtaaatgcagccaatgctgcagcctcaaaagcagcagcatttaaggccaactataagtctggaggtggcaaccctggcatgatgggccaaaatgactcttcgacaaaaactggtacacttctgatactcaattgagatttgatcttatccataatattctccgtgtctatatatacttcacatttttcttcgttgacacgagtatccatgcctttgtgttagtggtgatagtagagattttttttttaaaataacaatctttctttgttcacaaatactcgcatctttctttctttcacatcttttatagattggcactaccacttttcctttttgttctatatgcaaatatatttatttttgtatgtaaagttgtttaggccttttgttcttaccatctatcccttttcagttgggaatatgctacatcttatagttgaagcctgtatttcaaggaatttgattgatacatcttcttacttatggcccggctatgttgtatcatctgggcatttgaaagatgcgacattaccccaagaatccccctggttaaactttatgcaaggagcaccactttcaggtccacttattgatgctctgattgctactcctgcttcaaggtatgcagttatactagcagcgagtaacttagtatagaaaattataaattttatgggctggtttgctgcactgcaatttttaagaaagaatactacctattgcacaacgagttatacccctggctaagcaaactctctgaattcttcaggtcaagtgtgttggatgcaaaaaaaaaaaagaaaagaaaagaaaatccaatgtgtgctgaactttccaggtttacatgtcaggaaattatatatttttatgacaaaaatggaaatttaattcaatcgaagccattcaccattaggagtttggccttgaatggttacacttacatcattgatgctactaagttcctcatctgaaccgaagaactacattagttccttacatctctctgtatgatatggtggatatccatattattagagcattttccagtgcatgcattgccctgtaatgtccgattggaaactatcctggagatggagtagttcaatcgtagccatcaatacttctctctgggagacgacactctgagagttggggggaacagatccccaaacctttcctaagatccatctacattgatctttactatctccttgctctatgacctcaatatccttacggtcacttatttggcaaccttttggttttcacatgttagagcctgcttgaaaaccagcaaatgaatagtagccaagtgaaccacttatcctgcagctaggaactttttcctattaccactttgctgcgtgtagacaaccaatgccacaagcaagatgataacttaaatgtgtaacgcttctgccattttccaaacaacgtaaacattaagatatactctgaaacaattggagcttgaattttagaaaagacactaggactagcacttcacgtttaggaactccatttttaagctgattcttctcgattcaatgattctttttatttcccaattcatgctcatttttttggtctattgactggcattgtcatgttcctgccttaatttgaaattctgtttcagcaccacagaattggataggttatatcacatagcattaaatggttcagaggaggaaaaatcagctgctgcaaaaattctttgtggtgcatcatttgtttgtggttggaatatccaggtacctttattttagattaattatattgtgtaaagaagtttggaaattgtttatattgccatttcaacttttatgttcatatggttaaaaaaatctcaccttattgatacaatttaactgaaatacaattcaatcgcatttgatgtgtctactactgccatggccatgtccacatgcaaattcgtctttcctattctttcctatatgatgtatgccttatcttactgcacgcttacaagtggtcatgcccctgatttgaccttgtgcttatgagcaagccaaaaaggttcatttgcacttgcatactttttaacctaaaatgatgattatttaaattttacttgtcgtctcaggaatatgtggtccgcatggtggtcaagctattatcacctccattgccctcaaattcctcaacacagggcagcatgagccactaccttgctcagatgtctacattaaatgcactcttgcttggtatttcttatggtgatgctatccacattatttctttgtatggaatggtgagcaatacatcatgtactatcacctgcacaatttattctcaaaatatcaaactggtgaatgttttgcatagtttttttattcattatagttcctttattttaatcttctgaaaggggaaaaaaatatcctcctgatttgttcttcacttctcctcaaagtaaaaattatggaactgcctacaaatcaatgcagctgctgtaaggccacaggcaaattattaaacatgggagctgatcttgtgtagtcttatatatcctcaatttcaaatcttctacagtttgcctctcattgctaacattttatcttcttattcttttgtagttgttgttgcagtaagctgtaatgtctatcatttgttgttgctaacagttaatgactgccatagcttaccgtgtcgtttggtccccatatcttttttttttgtgagagccattgtacatgatatactgaaaccatatattaatattttacttatgactagcataatggtatacacacattcattacatgatacatgattattttcatgtctatatcatattagctattatgctaactccatgtctgcacctatatgtatttataccatttattatttgtaaaatacaggttccagatgttgctgcagctttaatgccaatctgtgaagtttttgggtccataccacctccatctaaccacaagcctgccattgttggtgaaatatcagtttattcggtcttctcttgtgcatttctttgtcttcttcgactgtggaaattttataaacccccacaagaatactgtctagctggacgtggaggctcagttagattggagcttactctggactacctgctgttaatgcgcaataaccatattgactttgcaaattcatctgccagtagtagaaactctagcaacaacataggtccattaaatgaggttcctgctcaaccactttatattgattctttccccaagttaagggcttggtattttcagaatcaagcttgcatagcttcaaccctttctggtctttgcaacaaaaatcctgttcatcaagttgcaaacaagattttgagtatgatttgcagaaaaatgaacaaacctgttgtatcatctggcaatctttcatccacttctagcagtagtgtcagtggttcctctgtaagtacaccagatgattaccaaaggccaacagttcctgcatgggaatttttagaagctgttccttttgttcttgaagctgttcttacagcatgtgctcatggacggttttccagccgagacttgactacaagtgaggaaactccatttctttcatgtcaccgtattgatttgatccccaagtcttaatcttatttatgtgctgcaggtttgagagatcttgtggacttcttgccagcttctattgcagcaattgttagctacttcttagcagaaattacacgaggaatctggaaaatggtcccgatgaatggaactgaatggcctagtcctggtgcttctcttcattccatcgaagcagaaataaaggaaattctcgcatctgctggcattcagattcccagctgctatccacgtattacctgcatcctattcttgtgcatcaatttagttgcattgcttcacacctaattactgataaatttcagctccatcattatatgatcttttaagttcattccatttaatatcacttcatgaatatagtttctttatttcattttgcaggtggtgtaccaccaatgcttcctttaccaatggctgcgctggtcagcttaacaattacatttaagcttgataagagttcagagtatatccatgcgatcagtggccaggcactagagaactgcgcagggggcagttcctggccaagtatgcccatcatagcagccttatggacacagaaagtcagaagatggcatgactttatcatcctctcttgtctgcgttctccattcggcagagataaagatgcagttgcacagctcatccaaagttgcttctcatcctttctacggtcctcgtgcagtgggtctgactttactgcaaaccgtggagttggtgccttaatgggagatgcaatcaccggccaaggtcttcagcttcccatggctcctggtttcatttacctgagaacttgtcgaacattccatgacacctactttgtgagtgaggtaatcctgaagcaagtcattgagtgggctgacaaacttgcaaatggattctcttccagtggccctccacagttaaaatcaggacgcacgccactatccagcgctgcatgtatggcgcatcaagttgcgatgcttggtgggggactcctgtgtgttgcaggtggacctcttctggtccaggtattgtatgaggagaccttgcctacgctgctgctatcagctcgagaagagagtatgaaagaccctggaccagtttcaagcacactccaaggttacgccatggccaacatgctcttcttctgtggtagtctgctctggggagcggaaagaacttctcctgtcatgaaattgtctttcctgtcaagaaggccacgagtggtgggaaaccatatggatttcatggcgggtgtattggatgggcacattcttctgggttgtgaccatggcacctggaaggcatatgtatcgcgctttgtgttcctggtggtgaagtttgtcccgtcatggttgcgggacattaaactggacacgctaaagaagatagcgtctgggcttcggagttggaatgagcacgatcttgcattggctttacttgagcgaggaggacctcaggcaatctccactgtagtcgacaccttgttgtgatctttgcctcttgacatttcccacccattatctgacataggagtttttgtaatcacatttgaggccaggacttgtgtagagatgtcttctggttcaggatttctcagtcgagctatctaaaatttctgaattctgtcagcggagagatgctagctaatcttgtttgctgggtgcattgctaacgttgctattttcagggtagcattgtgaacccaaaatcatacagaggccttgctcgacaacgtatccagttagaactttctgatctgtctatgtacatttctgtaggtagtatatttgtgtggtctgtaaaactgcagtggtagctgtatctcaacatatgcttattttcgacaaaatttaaaccaaggtagcatcagtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0681500, RefSeq:Os07g0681500