BGIOSGA021396

From RiceWiki
Revision as of 16:35, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021396

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021396, complete gene.

LocusTag

OsI_22642

Ensembl Transcript ID

BGIOSGA021396-TA

Ensembl Protein ID

BGIOSGA021396-PA

Length

2113

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11880053..11882165

Sequence Coding Region

11881471..11882165,11880451..11880520,11880053..11880334

Genome Context

<gbrowseImage1> name=IndicaChromosome06:11880053..11882165 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:11880053..11882165 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGTCATGTCTTCATGATTCGGCAAGAATCGGCGCCGCCGGCGCCACCGTGGTGGTTCCTCTCTCTGGTCTTCCTAGGCGCTGCCTATGTCGCCACCGTCACCCTCAGCCTCCTCGCCTACCTCGCGTTCTCCCTGCACCGTCAGCCCAAGGACCTCCGCAGCCGGTACGGTGCGTGGGCGGTCATTACTGGGCCGACATCCGGCATGGGCCGGGCTATGGCGCTAGAGCTCGCTCGCCGCGGCCTCAACCTCGTGCTCGTCGGCCGTGACCCCGCCAACCTCGAGGAGATCTCCAACACGGTCAGGTCTCTCCACGGGGTGGAGACCAAGACCGTGGTGTTCGACCTCTCACTCGTGGCGACTCCCCACGGCGACGAGCCGCTGCGGCAGCTCAGGGAGACGGTGGAGGGGCTGGATGTCGGGGTGTTAATGAACAACGCCGGTGTGGGGGAGCCGGCTATGGCGTACCTACACGAGGCGGACGTGGAGGCGTGGGTGAGAATGATGCGGGTGAACCTGTGGGCAGTGACGGAGGTGACGGCGGCGGTGCTGCCAGGGATGGTGGAGCGGGGCAGGGGCGCTGTTGTTAACATCGGCTCGGCATCATCGCAGGCCATCCCTTCCTTCCCCCTCTGCACCATTTACTCCGCCACCAAACGGCACGTACATGCAACAAACACACGTAACATGTACGTGGCTCATTTCTCCCGGAGCCTTCACCTCGAGTACGCAAGTGAAGGGATCCATGTGCAATGCCAGGCGCCGTTCTTCGTGGCGACGAGGATGGTGGAGAACCTGGCGGAGGCGAGGCGCCTCTCGCCGTTCACGGTCACCCCGGGCGCCTACGCGCGCGCGGCGGTGGGGTGGATCGGCCGCGGCGGCCCGCTTTGCACGCCGAACGTCCGGCACCGGCTGCTGTGGTGCGCCGCAGCCGCCGCGCCGGACTCCGTGCTCGACTGGTTCCTCCTGCGCAGCCACCTGGAGCAGAGGACGACGTTGTCTCAGCAAATCAGAGCGTCGGGGGCGCCGGCGCCGTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGHVFMIRQESAPPAPPWWFLSLVFLGAAYVATVTLSLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATKRHVHATNTRNMYVAHFSRSLHLEYASEGIHVQCQAPFFVATRMVENLAEARRLSPFTVTPGAYARAAVGWIGRGGPLCTPNVRHRLLWCAAAAAPDSVLDWFLLRSHLEQRTTLSQQIRASGAPAPS</aaseq>

Gene Sequence

<dnaseqindica>1..695#1646..1715#1832..2113#ATGGCTGGTCATGTCTTCATGATTCGGCAAGAATCGGCGCCGCCGGCGCCACCGTGGTGGTTCCTCTCTCTGGTCTTCCTAGGCGCTGCCTATGTCGCCACCGTCACCCTCAGCCTCCTCGCCTACCTCGCGTTCTCCCTGCACCGTCAGCCCAAGGACCTCCGCAGCCGGTACGGTGCGTGGGCGGTCATTACTGGGCCGACATCCGGCATGGGCCGGGCTATGGCGCTAGAGCTCGCTCGCCGCGGCCTCAACCTCGTGCTCGTCGGCCGTGACCCCGCCAACCTCGAGGAGATCTCCAACACGGTCAGGTCTCTCCACGGGGTGGAGACCAAGACCGTGGTGTTCGACCTCTCACTCGTGGCGACTCCCCACGGCGACGAGCCGCTGCGGCAGCTCAGGGAGACGGTGGAGGGGCTGGATGTCGGGGTGTTAATGAACAACGCCGGTGTGGGGGAGCCGGCTATGGCGTACCTACACGAGGCGGACGTGGAGGCGTGGGTGAGAATGATGCGGGTGAACCTGTGGGCAGTGACGGAGGTGACGGCGGCGGTGCTGCCAGGGATGGTGGAGCGGGGCAGGGGCGCTGTTGTTAACATCGGCTCGGCATCATCGCAGGCCATCCCTTCCTTCCCCCTCTGCACCATTTACTCCGCCACCAAACGGCACGTACATGCAACAAACACACGTAACATGTTACTACACTTTTTTATAGTAAAGGTTACTTACTCTCACTGTCTCTCTCTCTCTCTTCGTAAGTATTTTAATATTTAATTTTTGTTTATAAGGATTTATGTAATGCTTGTTCCATCAATCACCTTTCTTCCCGTGTTGCTCTTAACCACCATCACACTCCCAACCATCCGTGACAAATCCAAAATGTAAATTGACGGAGTGCTACCGTGCTAGTGTAAAAACATAGTAGTATGACTGAAGCAGAGATATATTAATTAATATGCGCATATGATCGAAAAAAAAACTTTCTCCATTTTAATTTATGGCTGTGTTAAATATCCACAAATATCTGTTATAGTATACCTAGAGTAAGTTCTGTATTCTGCAAGTTCAGGCCCTGAAAAAAAGAAGTAGAAACAGCGAGACAGCTGCATCGGTGCCGTCCGAACAGTTTCTTTACTGGTGGCTAATTAGACTTATTAATGATTAATTAGGGGTAGGGATTATGGCTGTTCGTTTGTACCGGTTAGAAGTCTATCCCTCCAGCACAGAAAAAGAAACAGCTTATTGTTGCATAATTAATTAAGTGTTAGCTAAAACTAACTTGAAAAATGGATTAATATGATATTTTTAAGTAATTTTTTTATATATTTTTTAAAAAATACACCGTTTAGTAGTTTGAAAAGTGTACGCGTGGAAAACGATATAGATTAGTTGGGAACAAGCACAAAAGAACAGTGATCGGCCACTGCCAACCATCCACCATTCAATGAGCGTTATCAAAGTCATTTTTTCCTCAACCTTCTTCTTACAAACCTAAAAATTGTTTATATTTGTCGTCTTAATTACACATGGTTGTATATATGTGGGCATAGAGATTTATAATCCTTTCATATGAGTTGTATATATGTGTGATTGTCAGCACAACCTGATATAATTAGTGACTACGTTCATTAATTTCAAGATGCAGGTACGTGGCTCATTTCTCCCGGAGCCTTCACCTCGAGTACGCAAGTGAAGGGATCCATGTGCAATGCCAGGTAACCCTGATCTGACGAGAGCAATCTGACGAAATTTTGCAACCAAAAAAACCAAGTGAAGAAACACACAACAAATTTACGCGATGCATCCATCCGATCATCTTATCTGCATGCAGGCGCCGTTCTTCGTGGCGACGAGGATGGTGGAGAACCTGGCGGAGGCGAGGCGCCTCTCGCCGTTCACGGTCACCCCGGGCGCCTACGCGCGCGCGGCGGTGGGGTGGATCGGCCGCGGCGGCCCGCTTTGCACGCCGAACGTCCGGCACCGGCTGCTGTGGTGCGCCGCAGCCGCCGCGCCGGACTCCGTGCTCGACTGGTTCCTCCTGCGCAGCCACCTGGAGCAGAGGACGACGTTGTCTCAGCAAATCAGAGCGTCGGGGGCGCCGGCGCCGTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021396