Os07g0682700

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Revision as of 08:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0682700| Description = Similar to Chitin-binding lectin 1 precursor (PL-I)| Version = NM_001067197.1 GI:115474126 GeneID:4344314| Length = ...")
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Gene Name

Os07g0682700

Description

Similar to Chitin-binding lectin 1 precursor (PL-I)

Version

NM_001067197.1 GI:115474126 GeneID:4344314

Length

3802 bp

Definition

Oryza sativa Japonica Group Os07g0682700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29617186..29620987

Sequence Coding Region

29617351..29617410,29618719..29618883,29619190..29619375,29619521..29619664,29620018..29620197
,29620296..29620952

Expression

GEO Profiles:Os07g0682700

Genome Context

<gbrowseImage1> name=NC_008400:29617186..29620987 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29617186..29620987 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccccggcggacgactactacggcgacgacgacgacgagtacgacgactacaacccccacccctacggcggcggctacgacatcttcgccacctacggctccccgattccgccctcccccaccacctgctaccccgtctcctccgctgctcctacggccccgccgcctaagccgtcgcctactccgcctccggcttctccaccgcctgcgcccactcccccgcaaacgcggccgccttctccgccgccgcagcagcagcagcctcggccggtttcgccgccgcccgtggcggagccgtactactggcccaagccctacgactacggggatgcgccgcgcgagcagccggcgtacgccacgccggaggtcttccggggctggcccttcttcgcgggggcgcgctgccactcgcggtgcggcggccgcgactactggaggcagttcatgcgggggctggattacctcttcggccacgccgatggctacggggagcgccgtattggggtggactaccacggcgtccccgtctacgccaacaggaagggaggcgtcgaggaagccgtcgtcatacaagtggagccgccggccaccgggactgtagagtggcaccacgccgccgacgacccggagtacaactacaacaacggcaatcgcttatcttgggatgacaatgccaaagatgaaacatatgcatatgtgcagcacaattacagttcgtatgatcgctcttatgatcagtcttacagtcttgatgccgtttccgatgaaactacttggtttcctaatcagaactaccagcacgtgtacaaagaggaggaatctcagtatcaggaaatcttgtccagctcttgtgcagaaagtaagatttcagctcagcctatttattgttacaaccagcagtttagtgaacaaccgctacatgttcttgttgagcccccagaaacagtttattctcagaagttggagtactatgagagcttctcaacatacaaccaccataacagcaacgatgattcagatatgttgggacattcatatgacatacagctgcccgatgaacatgtgccagatgaaccatttgaaccaattaagccttcttgggctatgcattcgggatactatcagtcctgcacagatggggcatctgctgaattcgaaaatcatactttaagctccagtgaattcagtggtattgcaagcttatttgcaacttccttctaccctcaacaaacacaaatttatgagtgtcatggagatgagaatgtttccttgcagcaaaattggcagtgcaactggaatgtggtttctgaaaatgatttccaatcgggttacgattccaaccatatgaatggctccttctggccgtttggagatcattcagcataa</cdnaseq>

Protein Sequence

<aaseq>MAAPADDYYGDDDDEYDDYNPHPYGGGYDIFATYGSPIPPSPTT CYPVSSAAPTAPPPKPSPTPPPASPPPAPTPPQTRPPSPPPQQQQPRPVSPPPVAEPY YWPKPYDYGDAPREQPAYATPEVFRGWPFFAGARCHSRCGGRDYWRQFMRGLDYLFGH ADGYGERRIGVDYHGVPVYANRKGGVEEAVVIQVEPPATGTVEWHHAADDPEYNYNNG NRLSWDDNAKDETYAYVQHNYSSYDRSYDQSYSLDAVSDETTWFPNQNYQHVYKEEES QYQEILSSSCAESKISAQPIYCYNQQFSEQPLHVLVEPPETVYSQKLEYYESFSTYNH HNSNDDSDMLGHSYDIQLPDEHVPDEPFEPIKPSWAMHSGYYQSCTDGASAEFENHTL SSSEFSGIASLFATSFYPQQTQIYECHGDENVSLQQNWQCNWNVVSENDFQSGYDSNH MNGSFWPFGDHSA</aaseq>

Gene Sequence

<dnaseqindica>3578..3637#2105..2269#1613..1798#1324..1467#791..970#36..692#atcactactccgttccctaaccaccattcctcgccatggcggccccggcggacgactactacggcgacgacgacgacgagtacgacgactacaacccccacccctacggcggcggctacgacatcttcgccacctacggctccccgattccgccctcccccaccacctgctaccccgtctcctccgctgctcctacggccccgccgcctaagccgtcgcctactccgcctccggcttctccaccgcctgcgcccactcccccgcaaacgcggccgccttctccgccgccgcagcagcagcagcctcggccggtttcgccgccgcccgtggcggagccgtactactggcccaagccctacgactacggggatgcgccgcgcgagcagccggcgtacgccacgccggaggtcttccggggctggcccttcttcgcgggggcgcgctgccactcgcggtgcggcggccgcgactactggaggcagttcatgcgggggctggattacctcttcggccacgccgatggctacggggagcgccgtattggggtggactaccacggcgtccccgtctacgccaacaggaagggaggcgtcgaggaagccgtcgtcatacaagtggagccgccggccaccgggactgtagagtggcaccacgccgccgacgacccggagtacaactacaacaacggcaatgtgagcgaatacaccataccactcgggatttttcacttcacttctgacttgctattgttgttcacttgctacgtctgctgtcttgcatgttgagccagcgcttatcttgggatgacaatgccaaagatgaaacatatgcatatgtgcagcacaattacagttcgtatgatcgctcttatgatcagtcttacagtcttgatgccgtttccgatgaaactacttggtttcctaatcagaactaccagcacgtgtacaaagaggaggaatctcagtatcaggtactaattaacttatcactgatcaagaagaatgaggtcaattagtcgtcagcctgagtatttagctcaattgcgtgcaatagtactgtaatttagttatgtttgattcatttttctgagaatatgctagctaatcttgtcagtggacatatttgacatgtaaaatgacagaaaatggaacgaaaaggattgtttattttgagggagtcgctttctgtgactagacagtttaatcaatgacacattagcgttcgcgaaaaaaatcaatgatacattactcttgtgtagcattcaacagatcctgcctgctatcttcgcttctaatccctgcttaatattaaatttgcgtgcaggaaatcttgtccagctcttgtgcagaaagtaagatttcagctcagcctatttattgttacaaccagcagtttagtgaacaaccgctacatgttcttgttgagcccccagaaacagtttattctcagaagttggagtactatgaggtttgtctgtcatctacaaatgctgtttacagtgtcttcatttggtaattatgcatttgcttgttcaggttgagttcatcaatctcaagggagaacactttttttttatgtagtcttgtgattgtcaattaaataatttgtgcagagcttctcaacatacaaccaccataacagcaacgatgattcagatatgttgggacattcatatgacatacagctgcccgatgaacatgtgccagatgaaccatttgaaccaattaagccttcttgggctatgcattcgggatactatcagtcctgcacagatggggcatctgctgaattcgaaaatgtaagttaggtagttatttcaggaattatgttgtaaaaaaaatatccaactgagactatctttttcacatttgatgttataccgatatggtgataccttgctgcttcaagatcaaagtaattgtattattgaaattttcagtggaagctatcgttatcacatatgttgtgctactaataccttcctgaggcaatattattttttctttaaactccttgagtgctacattttatcggaccatgaacttttttattggactatagctacttatgttttcctttactaattcgttactttgacttgcagcatactttaagctccagtgaattcagtggtattgcaagcttatttgcaacttccttctaccctcaacaaacacaaatttatgagtgtcatggagatgagaatgtttccttgcagcaaaattggcagtgcaactggaatgtggtttctgaaaatgatttccaatcggtaagcgtaacggtgtctatgtctgtgaacgtgcttttttaataccctatactcttatttttatcgctccattttactcctatttgtgtactgttgaatgtgtgtcatggtcggtacacatgtagttgaagtgctaaggatggcgcacagggggcagaaccaagcggcagcagatagaccatcaatgcatttgccgcacctatcgtacctccttagttgtttgattcaatttgtttaggttgagatttgttaaactttttaggtttgttaggggctggctttatttaagagagcttggcattatctttgaaattaagagcaaattacaagtctactctctcatcccctgttctctctgcctctccccttttttggtgctgcctggtgccatctcattcaaccatgggtagtaagactgttaacctatctagctacttcccactcctatcttattagatcactccctaacgcccgaatatattatattgttcttggcctcatgggtggctgatgacgatcaatgaaaacttcagacatgtctgtgagtgatgctttttttccccttgcaaacgatagaattatgaattagtatctgttttcgttttggatgctgtaaatttaaaatgtctggacctttatagtatgtcccgtgtatcctttcacattcttctgaaatatttatttttgctatttaatatgcaatccatgacacaatttgttttgttgctcaagaatggccatcacatgatctcatttgctgaagttcaaaatggcactgcttggctgcgattttttgcggctgcagctgtgcataatgtctgtggctgtggcgcacagccgtggctactagcagcagacgcagccacaaaaatgacagccaaacaagcccaatatatctctttcagatttagttaatacttggttgctctttgttccatatattctgatgttagtgtaacttttatccacattcatgatctaccacacttgccagtgttagtagtaattgggatttacttgccaaaagaataattctcagactccagcagataagtgaggttaactctgtctttatggtatagttttcttaacaaatcagcaatctcagtacccttgctagacgattttaatgagtgttaatagtttggttgtttgtgctttgctggtattgttgctagatttcaactgaaacaatcttgtatggtgcccgcatcacatttttatggttgaaacatgagtgtgcaactgtgcatgcgatgtctccatgttgtcttttgaactgaaatatttctccatttttatttgcagggttacgattccaaccatatgaatggctccttctggccgtttggagatcattcagcataataccacatagtctatattgttgtaatttcactcttatcttttttatgtacatttcatttaaatttacccggccaaatgtaaatgaaaaaaatatatataagaggttatgcaccaatgtatctaggttcagcatataatgtaagatcattgacgctgttgttgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0682700, RefSeq:Os07g0682700